data_F73 # _chem_comp.id F73 _chem_comp.name "[(2R,3R)-3-[2-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)ethanoylamino]-4-oxidanyl-butan-2-yl] dihydrogen phosphate" _chem_comp.type "DNA linking" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C11 H17 N6 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-03 _chem_comp.pdbx_modified_date 2020-11-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 376.262 _chem_comp.one_letter_code ? _chem_comp.three_letter_code F73 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7BPF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal F73 O2A O1 O 0 1 N N N -23.784 -25.443 12.084 -0.826 -0.859 1.148 O2A F73 1 F73 "C3'" C1 C 0 1 N N R -25.403 -27.680 9.304 3.265 -1.061 0.713 "C3'" F73 2 F73 "O3'" O2 O 0 1 N N N -24.538 -28.205 8.284 3.793 -0.280 -0.361 "O3'" F73 3 F73 "C2'" C2 C 0 1 N N R -24.651 -27.811 10.657 1.852 -0.577 1.048 "C2'" F73 4 F73 "C1'" C3 C 0 1 N N N -24.422 -29.293 10.891 1.899 0.901 1.442 "C1'" F73 5 F73 N9 N1 N 0 1 Y N N -21.396 -24.041 11.414 -2.626 -1.170 -0.735 N9 F73 6 F73 C8 C4 C 0 1 Y N N -21.707 -22.820 10.991 -3.303 -2.334 -0.513 C8 F73 7 F73 N7 N2 N 0 1 Y N N -21.260 -21.922 11.877 -4.519 -2.071 -0.132 N7 F73 8 F73 C5 C5 C 0 1 Y N N -20.657 -22.597 12.861 -4.694 -0.728 -0.086 C5 F73 9 F73 C6 C6 C 0 1 N N N -20.053 -22.163 13.963 -5.781 0.112 0.251 C6 F73 10 F73 O6 O3 O 0 1 N N N -19.969 -20.969 14.216 -6.852 -0.359 0.593 O6 F73 11 F73 N1 N3 N 0 1 N N N -19.504 -23.073 14.837 -5.602 1.450 0.185 N1 F73 12 F73 C2 C7 C 0 1 N N N -19.607 -24.428 14.538 -4.400 1.966 -0.198 C2 F73 13 F73 N2 N4 N 0 1 N N N -19.077 -25.291 15.390 -4.247 3.328 -0.256 N2 F73 14 F73 N3 N5 N 0 1 N N N -20.242 -24.827 13.409 -3.382 1.196 -0.513 N3 F73 15 F73 C4 C8 C 0 1 Y N N -20.743 -23.905 12.588 -3.485 -0.138 -0.471 C4 F73 16 F73 OP2 O4 O 0 1 N N N -24.084 -29.737 6.169 5.295 1.496 0.864 OP2 F73 17 F73 P P1 P 0 1 N N N -25.138 -28.700 6.840 5.251 0.401 -0.316 P F73 18 F73 OP1 O5 O 0 1 N N N -26.586 -29.074 6.860 6.274 -0.638 -0.063 OP1 F73 19 F73 C3A C9 C 0 1 N N N -25.821 -26.226 8.963 3.215 -2.532 0.297 C3A F73 20 F73 "O1'" O6 O 0 1 N N N -25.485 -29.782 11.743 2.479 1.659 0.378 "O1'" F73 21 F73 "N2'" N6 N 0 1 N N N -23.370 -27.134 10.555 0.988 -0.743 -0.123 "N2'" F73 22 F73 C2A C10 C 0 1 N N N -23.054 -25.993 11.237 -0.343 -0.876 0.035 C2A F73 23 F73 C2B C11 C 0 1 N N N -21.673 -25.415 10.820 -1.232 -1.047 -1.170 C2B F73 24 F73 H1 H1 H 0 1 N N N -26.316 -28.292 9.362 3.904 -0.952 1.589 H1 F73 25 F73 H2 H2 H 0 1 N N N -25.263 -27.387 11.467 1.456 -1.162 1.878 H2 F73 26 F73 H3 H3 H 0 1 N N N -24.437 -29.829 9.931 0.887 1.258 1.633 H3 F73 27 F73 H4 H4 H 0 1 N N N -23.450 -29.447 11.382 2.503 1.018 2.342 H4 F73 28 F73 H5 H5 H 0 1 N N N -22.236 -22.589 10.078 -2.891 -3.325 -0.636 H5 F73 29 F73 H6 H6 H 0 1 N N N -19.041 -22.767 15.669 -6.332 2.047 0.412 H6 F73 30 F73 H7 H7 H 0 1 N N N -19.138 -26.273 15.210 -4.989 3.910 -0.026 H7 F73 31 F73 H8 H8 H 0 1 N N N -18.615 -24.961 16.214 -3.398 3.710 -0.527 H8 F73 32 F73 HOP2 H9 H 0 0 N N N -24.550 -30.502 5.852 4.618 2.182 0.790 H9 F73 33 F73 H11 H11 H 0 1 N N N -26.482 -25.839 9.753 4.221 -2.877 0.058 H11 F73 34 F73 H12 H12 H 0 1 N N N -24.924 -25.593 8.894 2.812 -3.128 1.116 H12 F73 35 F73 H13 H13 H 0 1 N N N -26.354 -26.214 8.001 2.576 -2.641 -0.579 H13 F73 36 F73 H14 H14 H 0 1 N Y N -25.361 -30.710 11.903 2.601 2.596 0.584 H14 F73 37 F73 H15 H15 H 0 1 N N N -22.678 -27.527 9.949 1.375 -0.757 -1.013 H15 F73 38 F73 H16 H16 H 0 1 N N N -20.888 -26.107 11.158 -0.940 -1.947 -1.712 H16 F73 39 F73 H17 H17 H 0 1 N N N -21.644 -25.334 9.723 -1.130 -0.180 -1.822 H17 F73 40 F73 OP3 OP4 O 0 1 N Y N -24.632 -27.602 5.960 5.552 1.119 -1.725 OP4 F73 41 F73 HOP3 H10 H 0 0 N Y N -25.355 -27.232 5.467 6.416 1.552 -1.770 H10 F73 42 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal F73 OP2 P SING N N 1 F73 P OP1 DOUB N N 2 F73 P "O3'" SING N N 3 F73 "O3'" "C3'" SING N N 4 F73 C3A "C3'" SING N N 5 F73 "C3'" "C2'" SING N N 6 F73 "N2'" "C2'" SING N N 7 F73 "N2'" C2A SING N N 8 F73 "C2'" "C1'" SING N N 9 F73 C2B C2A SING N N 10 F73 C2B N9 SING N N 11 F73 "C1'" "O1'" SING N N 12 F73 C8 N9 SING Y N 13 F73 C8 N7 DOUB Y N 14 F73 C2A O2A DOUB N N 15 F73 N9 C4 SING Y N 16 F73 N7 C5 SING Y N 17 F73 C4 C5 DOUB Y N 18 F73 C4 N3 SING N N 19 F73 C5 C6 SING N N 20 F73 N3 C2 DOUB N N 21 F73 C6 O6 DOUB N N 22 F73 C6 N1 SING N N 23 F73 C2 N1 SING N N 24 F73 C2 N2 SING N N 25 F73 "C3'" H1 SING N N 26 F73 "C2'" H2 SING N N 27 F73 "C1'" H3 SING N N 28 F73 "C1'" H4 SING N N 29 F73 C8 H5 SING N N 30 F73 N1 H6 SING N N 31 F73 N2 H7 SING N N 32 F73 N2 H8 SING N N 33 F73 OP2 HOP2 SING N N 34 F73 C3A H11 SING N N 35 F73 C3A H12 SING N N 36 F73 C3A H13 SING N N 37 F73 "O1'" H14 SING N N 38 F73 "N2'" H15 SING N N 39 F73 C2B H16 SING N N 40 F73 C2B H17 SING N N 41 F73 P OP3 SING N N 42 F73 OP3 HOP3 SING N N 43 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor F73 InChI InChI 1.03 "InChI=1S/C11H17N6O7P/c1-5(24-25(21,22)23)6(3-18)14-7(19)2-17-4-13-8-9(17)15-11(12)16-10(8)20/h4-6,18H,2-3H2,1H3,(H,14,19)(H2,21,22,23)(H3,12,15,16,20)/t5-,6-/m1/s1" F73 InChIKey InChI 1.03 WFAAGLMOJNVWOI-PHDIDXHHSA-N F73 SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O[P](O)(O)=O)[C@@H](CO)NC(=O)Cn1cnc2C(=O)NC(=Nc12)N" F73 SMILES CACTVS 3.385 "C[CH](O[P](O)(O)=O)[CH](CO)NC(=O)Cn1cnc2C(=O)NC(=Nc12)N" F73 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]([C@@H](CO)NC(=O)Cn1cnc2c1N=C(NC2=O)N)OP(=O)(O)O" F73 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(CO)NC(=O)Cn1cnc2c1N=C(NC2=O)N)OP(=O)(O)O" # _pdbx_chem_comp_identifier.comp_id F73 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{R})-3-[2-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)ethanoylamino]-4-oxidanyl-butan-2-yl] dihydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site F73 "Create component" 2020-04-03 PDBJ F73 "Modify internal type" 2020-11-04 PDBJ F73 "Modify linking type" 2020-11-04 PDBJ F73 "Modify leaving atom flag" 2020-11-04 PDBJ F73 "Modify linking type" 2020-11-18 PDBJ F73 "Initial release" 2020-11-25 RCSB ##