data_F7Z # _chem_comp.id F7Z _chem_comp.name "(1Z,3E,5S,7R,8R,10R,11R,12S,13R,15S,16R,17S,19Z,26S)-11-ethyl-2-hydroxy-10-methyl-22,27-diaza-14 oxahexacyclo[24.2.1.05,17.07,16.013,15.08,12]nonacosa-1(2),3,19-triene-21,28,29-trione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H38 N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms epoxyikarugamycin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-29 _chem_comp.pdbx_modified_date 2023-11-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 494.622 _chem_comp.one_letter_code ? _chem_comp.three_letter_code F7Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8JUA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal F7Z C12 C1 C 0 1 N N S N N N 17.556 -0.615 19.150 -1.001 -0.962 0.440 C12 F7Z 1 F7Z C13 C2 C 0 1 N N N N N N 14.282 1.079 24.904 -7.626 0.431 0.162 C13 F7Z 2 F7Z C14 C3 C 0 1 N N N N N N 14.626 1.765 26.213 -7.965 -0.519 1.313 C14 F7Z 3 F7Z C16 C4 C 0 1 N N N N N N 17.923 0.859 17.105 0.356 1.048 -0.109 C16 F7Z 4 F7Z C19 C5 C 0 1 N N N N N N 18.430 -3.554 15.912 2.553 -2.529 -0.247 C19 F7Z 5 F7Z C20 C6 C 0 1 N N N N N N 17.127 -3.262 16.549 1.484 -2.821 -1.214 C20 F7Z 6 F7Z C22 C7 C 0 1 N N N N N N 19.972 -3.420 13.102 6.076 -1.716 -0.364 C22 F7Z 7 F7Z C23 C8 C 0 1 N N N N N N 19.519 -4.567 13.967 4.870 -2.317 0.360 C23 F7Z 8 F7Z C1 C9 C 0 1 N N R N N N 14.991 1.638 23.665 -6.223 1.004 0.370 C1 F7Z 9 F7Z C2 C10 C 0 1 N N R N N N 14.296 2.776 22.895 -5.914 2.072 -0.704 C2 F7Z 10 F7Z C3 C11 C 0 1 N N N N N N 14.651 2.556 21.411 -4.516 1.745 -1.275 C3 F7Z 11 F7Z C4 C12 C 0 1 N N R N N N 15.659 1.427 21.433 -3.924 0.722 -0.306 C4 F7Z 12 F7Z C5 C13 C 0 1 N N S N N N 15.208 0.553 22.611 -5.166 -0.086 0.161 C5 F7Z 13 F7Z C6 C14 C 0 1 N N R N N N 15.719 0.659 20.107 -2.929 -0.243 -0.905 C6 F7Z 14 F7Z C7 C15 C 0 1 N N R N N N 16.447 -0.697 20.210 -2.474 -1.273 0.125 C7 F7Z 15 F7Z C11 C16 C 0 1 N N S N N N 16.947 0.363 18.121 -0.480 -0.063 -0.690 C11 F7Z 16 F7Z C9 C17 C 0 1 N N R N N N 16.267 -0.464 22.759 -4.722 -0.771 1.453 C9 F7Z 17 F7Z C25 C18 C 0 1 N N N N N N 18.954 -3.118 12.014 6.533 -0.446 0.357 C25 F7Z 18 F7Z C8 C19 C 0 1 N N S N N N 16.849 -1.021 21.579 -3.282 -1.298 1.413 C8 F7Z 19 F7Z C10 C20 C 0 1 N N N N N N 16.473 1.466 19.054 -1.698 0.510 -1.424 C10 F7Z 20 F7Z C15 C21 C 0 1 N N N N N N 12.797 2.924 23.121 -6.962 2.012 -1.817 C15 F7Z 21 F7Z C17 C22 C 0 1 N N N N N N 17.977 -1.969 18.567 -0.187 -2.251 0.507 C17 F7Z 22 F7Z O18 O1 O 0 1 N N N N N N 19.525 -3.140 16.345 2.292 -2.147 0.877 O18 F7Z 23 F7Z C21 C23 C 0 1 N N N N N N 16.936 -2.590 17.684 0.205 -2.690 -0.878 C21 F7Z 24 F7Z N24 N1 N 0 1 N N N N N N 18.346 -4.260 14.781 3.854 -2.700 -0.651 N24 F7Z 25 F7Z O26 O2 O 0 1 N N N N N N 19.859 1.574 15.079 2.118 3.092 0.888 O26 F7Z 26 F7Z C27 C24 C 0 1 N N N N N N 18.958 0.647 14.831 2.583 2.000 0.261 C27 F7Z 27 F7Z C28 C25 C 0 1 N N N N N N 18.028 0.345 15.900 1.676 0.991 -0.283 C28 F7Z 28 F7Z C29 C26 C 0 1 N N N N N N 20.105 0.121 12.661 5.053 2.571 0.663 C29 F7Z 29 F7Z C30 C27 C 0 1 N N N N N N 18.992 -0.016 13.622 3.958 1.767 0.130 C30 F7Z 30 F7Z N31 N2 N 0 1 N N N N N N 19.905 -0.822 11.726 6.239 2.001 0.381 N31 F7Z 31 F7Z C32 C28 C 0 1 N N S N N N 18.707 -1.614 11.866 6.008 0.779 -0.395 C32 F7Z 32 F7Z C33 C29 C 0 1 N N N N N N 18.073 -0.995 13.116 4.510 0.664 -0.570 C33 F7Z 33 F7Z O34 O3 O 0 1 N N N N N N 21.044 0.922 12.702 4.913 3.612 1.278 O34 F7Z 34 F7Z O35 O4 O 0 1 N N N N N N 16.998 -1.344 13.563 3.907 -0.194 -1.182 O35 F7Z 35 F7Z O36 O5 O 0 1 N N N N N N 15.967 -1.790 22.358 -4.428 -2.163 1.431 O36 F7Z 36 F7Z HC12 H1 H 0 0 N N N N N N 18.438 -0.139 19.603 -0.939 -0.430 1.388 HC12 F7Z 37 F7Z H13A H2 H 0 0 N N N N N N 13.197 1.173 24.746 -7.660 -0.115 -0.781 H13A F7Z 38 F7Z H13B H3 H 0 0 N N N N N N 14.548 0.016 24.997 -8.351 1.245 0.137 H13B F7Z 39 F7Z H14A H4 H 0 0 N N N N N N 14.068 1.291 27.034 -9.000 -0.848 1.220 H14A F7Z 40 F7Z H14B H5 H 0 0 N N N N N N 15.706 1.672 26.403 -7.303 -1.384 1.277 H14B F7Z 41 F7Z H14C H6 H 0 0 N N N N N N 14.354 2.829 26.152 -7.833 -0.000 2.263 H14C F7Z 42 F7Z HC16 H7 H 0 0 N N N N N N 18.573 1.679 17.373 -0.102 1.860 0.428 HC16 F7Z 43 F7Z HC20 H8 H 0 0 N N N N N N 16.245 -3.629 16.045 1.743 -3.150 -2.213 HC20 F7Z 44 F7Z H22B H9 H 0 0 N N N N N N 20.932 -3.681 12.633 6.891 -2.440 -0.374 H22B F7Z 45 F7Z H22A H10 H 0 0 N N N N N N 20.102 -2.526 13.730 5.798 -1.470 -1.389 H22A F7Z 46 F7Z H23B H11 H 0 0 N N N N N N 19.276 -5.419 13.315 5.181 -3.200 0.918 H23B F7Z 47 F7Z H23A H12 H 0 0 N N N N N N 20.345 -4.843 14.639 4.448 -1.579 1.042 H23A F7Z 48 F7Z HC1 H13 H 0 1 N N N N N N 15.979 2.003 23.980 -6.133 1.432 1.368 HC1 F7Z 49 F7Z HC2 H14 H 0 1 N N N N N N 14.771 3.718 23.207 -5.909 3.064 -0.251 HC2 F7Z 50 F7Z HC3B H15 H 0 0 N N N N N N 15.093 3.465 20.977 -4.606 1.315 -2.273 HC3B F7Z 51 F7Z HC3A H16 H 0 0 N N N N N N 13.759 2.271 20.835 -3.898 2.642 -1.303 HC3A F7Z 52 F7Z HC4 H17 H 0 1 N N N N N N 16.656 1.836 21.654 -3.476 1.235 0.544 HC4 F7Z 53 F7Z HC5 H18 H 0 1 N N N N N N 14.248 0.074 22.369 -5.484 -0.808 -0.590 HC5 F7Z 54 F7Z HC6 H19 H 0 1 N N N N N N 14.693 0.482 19.753 -3.398 -0.764 -1.737 HC6 F7Z 55 F7Z HC7 H20 H 0 1 N N N N N N 15.738 -1.468 19.875 -2.519 -2.257 -0.335 HC7 F7Z 56 F7Z HC11 H21 H 0 0 N N N N N N 16.085 -0.108 17.626 0.119 -0.654 -1.382 HC11 F7Z 57 F7Z HC9 H22 H 0 1 N N N N N N 16.930 -0.343 23.629 -5.104 -0.341 2.381 HC9 F7Z 58 F7Z H25B H23 H 0 0 N N N N N N 18.004 -3.611 12.269 6.140 -0.444 1.374 H25B F7Z 59 F7Z H25A H24 H 0 0 N N N N N N 19.327 -3.513 11.058 7.622 -0.416 0.388 H25A F7Z 60 F7Z HC8 H25 H 0 1 N N N N N N 17.911 -1.291 21.679 -2.694 -1.231 2.332 HC8 F7Z 61 F7Z H10B H26 H 0 0 N N N N N N 17.320 2.013 19.495 -1.592 0.354 -2.497 H10B F7Z 62 F7Z H10A H27 H 0 0 N N N N N N 15.809 2.174 18.537 -1.795 1.574 -1.209 H10A F7Z 63 F7Z H15C H28 H 0 0 N N N N N N 12.601 3.078 24.192 -7.935 2.294 -1.416 H15C F7Z 64 F7Z H15A H29 H 0 0 N N N N N N 12.424 3.788 22.552 -6.684 2.701 -2.615 H15A F7Z 65 F7Z H15B H30 H 0 0 N N N N N N 12.283 2.012 22.782 -7.012 0.998 -2.214 H15B F7Z 66 F7Z H17B H31 H 0 0 N N N N N N 18.183 -2.658 19.400 0.711 -2.080 1.100 H17B F7Z 67 F7Z H17A H32 H 0 0 N N N N N N 18.893 -1.824 17.976 -0.786 -3.032 0.975 H17A F7Z 68 F7Z HC21 H33 H 0 0 N N N N N N 15.911 -2.480 18.006 -0.563 -2.905 -1.608 HC21 F7Z 69 F7Z HN24 H34 H 0 0 N N N N N N 17.450 -4.589 14.482 4.090 -3.043 -1.527 HN24 F7Z 70 F7Z HO26 H35 H 0 0 N N N N N N 20.486 1.606 14.366 1.158 3.179 0.963 HO26 F7Z 71 F7Z HC28 H36 H 0 0 N N N N N N 17.306 -0.425 15.670 2.094 0.166 -0.852 HC28 F7Z 72 F7Z HN31 H37 H 0 0 N N N N N N 20.550 -0.967 10.975 7.106 2.344 0.648 HN31 F7Z 73 F7Z HC32 H38 H 0 0 N N N N N N 18.040 -1.445 11.008 6.490 0.855 -1.370 HC32 F7Z 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal F7Z N31 C32 SING N N 1 F7Z N31 C29 SING N N 2 F7Z C32 C25 SING N N 3 F7Z C32 C33 SING N N 4 F7Z C25 C22 SING N N 5 F7Z C29 O34 DOUB N N 6 F7Z C29 C30 SING N N 7 F7Z C22 C23 SING N N 8 F7Z C33 O35 DOUB N N 9 F7Z C33 C30 SING N N 10 F7Z C30 C27 DOUB N Z 11 F7Z C23 N24 SING N N 12 F7Z N24 C19 SING N N 13 F7Z C27 O26 SING N N 14 F7Z C27 C28 SING N N 15 F7Z C28 C16 DOUB N E 16 F7Z C19 O18 DOUB N N 17 F7Z C19 C20 SING N N 18 F7Z C20 C21 DOUB N Z 19 F7Z C16 C11 SING N N 20 F7Z C21 C17 SING N N 21 F7Z C11 C10 SING N N 22 F7Z C11 C12 SING N N 23 F7Z C17 C12 SING N N 24 F7Z C10 C6 SING N N 25 F7Z C12 C7 SING N N 26 F7Z C6 C7 SING N N 27 F7Z C6 C4 SING N N 28 F7Z C7 C8 SING N N 29 F7Z C3 C4 SING N N 30 F7Z C3 C2 SING N N 31 F7Z C4 C5 SING N N 32 F7Z C8 O36 SING N N 33 F7Z C8 C9 SING N N 34 F7Z O36 C9 SING N N 35 F7Z C5 C9 SING N N 36 F7Z C5 C1 SING N N 37 F7Z C2 C15 SING N N 38 F7Z C2 C1 SING N N 39 F7Z C1 C13 SING N N 40 F7Z C13 C14 SING N N 41 F7Z C12 HC12 SING N N 42 F7Z C13 H13A SING N N 43 F7Z C13 H13B SING N N 44 F7Z C14 H14A SING N N 45 F7Z C14 H14B SING N N 46 F7Z C14 H14C SING N N 47 F7Z C16 HC16 SING N N 48 F7Z C20 HC20 SING N N 49 F7Z C22 H22B SING N N 50 F7Z C22 H22A SING N N 51 F7Z C23 H23B SING N N 52 F7Z C23 H23A SING N N 53 F7Z C1 HC1 SING N N 54 F7Z C2 HC2 SING N N 55 F7Z C3 HC3B SING N N 56 F7Z C3 HC3A SING N N 57 F7Z C4 HC4 SING N N 58 F7Z C5 HC5 SING N N 59 F7Z C6 HC6 SING N N 60 F7Z C7 HC7 SING N N 61 F7Z C11 HC11 SING N N 62 F7Z C9 HC9 SING N N 63 F7Z C25 H25B SING N N 64 F7Z C25 H25A SING N N 65 F7Z C8 HC8 SING N N 66 F7Z C10 H10B SING N N 67 F7Z C10 H10A SING N N 68 F7Z C15 H15C SING N N 69 F7Z C15 H15A SING N N 70 F7Z C15 H15B SING N N 71 F7Z C17 H17B SING N N 72 F7Z C17 H17A SING N N 73 F7Z C21 HC21 SING N N 74 F7Z N24 HN24 SING N N 75 F7Z O26 HO26 SING N N 76 F7Z C28 HC28 SING N N 77 F7Z N31 HN31 SING N N 78 F7Z C32 HC32 SING N N 79 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor F7Z InChI InChI 1.06 "InChI=1S/C29H38N2O5/c1-3-16-14(2)12-18-19-13-15-9-10-21(32)25-26(34)20(31-29(25)35)7-5-11-30-22(33)8-4-6-17(15)24(19)28-27(36-28)23(16)18/h4,8-10,14-20,23-24,27-28,32H,3,5-7,11-13H2,1-2H3,(H,30,33)(H,31,35)/b8-4-,10-9+,25-21-/t14-,15-,16-,17+,18-,19-,20+,23+,24-,27-,28+/m1/s1" F7Z InChIKey InChI 1.06 XVOOQLPJKAEVAZ-CGBNOSMTSA-N F7Z SMILES_CANONICAL CACTVS 3.385 "CC[C@@H]1[C@H](C)C[C@@H]2[C@H]3C[C@H]4/C=C/C(=C5/C(=O)N[C@@H](CCCNC(=O)\C=C/C[C@@H]4[C@H]3[C@@H]6O[C@@H]6[C@@H]12)C5=O)O" F7Z SMILES CACTVS 3.385 "CC[CH]1[CH](C)C[CH]2[CH]3C[CH]4C=CC(=C5C(=O)N[CH](CCCNC(=O)C=CC[CH]4[CH]3[CH]6O[CH]6[CH]12)C5=O)O" F7Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@@H]1[C@@H](C[C@H]2[C@H]1[C@@H]3[C@@H](O3)[C@H]4[C@@H]2C[C@@H]/5[C@@H]4C/C=C\C(=O)NCCC[C@H]6C(=O)/C(=C(\C=C5)/O)/C(=O)N6)C" F7Z SMILES "OpenEye OEToolkits" 2.0.7 "CCC1C(CC2C1C3C(O3)C4C2CC5C4CC=CC(=O)NCCCC6C(=O)C(=C(C=C5)O)C(=O)N6)C" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site F7Z "Create component" 2023-06-29 PDBC F7Z "Initial release" 2023-11-15 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id F7Z _pdbx_chem_comp_synonyms.name epoxyikarugamycin _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? #