data_F96 # _chem_comp.id F96 _chem_comp.name "1-[6-(3-fluorophenyl)benzimidazol-1-yl]-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H22 F N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-20 _chem_comp.pdbx_modified_date 2023-06-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 367.417 _chem_comp.one_letter_code ? _chem_comp.three_letter_code F96 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7BWS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal F96 C11 C1 C 0 1 Y N N 17.023 19.833 182.291 3.622 -1.834 -0.827 C11 F96 1 F96 C12 C2 C 0 1 Y N N 15.983 19.175 181.616 3.059 -0.699 -0.238 C12 F96 2 F96 C7 C3 C 0 1 N N N 13.458 16.667 184.463 -1.015 -1.570 1.690 C7 F96 3 F96 C6 C4 C 0 1 N N S 14.059 12.837 186.832 -4.773 1.670 0.502 C6 F96 4 F96 C5 C5 C 0 1 N N N 14.282 11.373 187.173 -5.547 2.232 -0.693 C5 F96 5 F96 C4 C6 C 0 1 N N N 14.889 10.625 185.993 -6.230 1.080 -1.436 C4 F96 6 F96 C3 C7 C 0 1 N N N 13.972 10.761 184.851 -5.173 0.064 -1.875 C3 F96 7 F96 C2 C8 C 0 1 N N R 13.190 12.917 185.619 -3.758 0.637 0.007 C2 F96 8 F96 N1 N1 N 0 1 Y N N 14.529 17.636 184.688 -0.055 -2.404 0.964 N1 F96 9 F96 C10 C9 C 0 1 Y N N 17.168 19.746 183.668 2.967 -3.030 -0.795 C10 F96 10 F96 C9 C10 C 0 1 Y N N 16.251 18.984 184.389 1.722 -3.129 -0.165 C9 F96 11 F96 C8 C11 C 0 1 Y N N 15.089 17.974 185.887 -0.186 -3.729 0.686 C8 F96 12 F96 C13 C12 C 0 1 Y N N 15.851 19.276 180.138 3.784 0.594 -0.281 C13 F96 13 F96 N N2 N 0 1 N N N 13.808 12.177 184.513 -4.461 -0.444 -0.695 N F96 14 F96 C C13 C 0 1 N N N 13.848 15.264 184.881 -1.914 -0.867 0.706 C F96 15 F96 O O1 O 0 1 N N N 15.003 14.905 184.895 -1.768 -1.044 -0.480 O F96 16 F96 C1 C14 C 0 1 N N N 12.725 14.338 185.262 -2.996 0.058 1.201 C1 F96 17 F96 C14 C15 C 0 1 Y N N 15.564 18.155 179.359 5.026 0.679 -0.908 C14 F96 18 F96 C15 C16 C 0 1 Y N N 15.606 18.220 177.975 5.697 1.884 -0.946 C15 F96 19 F96 C16 C17 C 0 1 Y N N 15.899 19.413 177.336 5.141 3.008 -0.363 C16 F96 20 F96 C17 C18 C 0 1 Y N N 16.120 20.512 178.116 3.907 2.931 0.263 C17 F96 21 F96 C18 C19 C 0 1 Y N N 16.119 20.478 179.487 3.224 1.730 0.301 C18 F96 22 F96 C19 C20 C 0 1 Y N N 15.085 18.387 182.341 1.820 -0.778 0.389 C19 F96 23 F96 C20 C21 C 0 1 Y N N 15.237 18.293 183.721 1.153 -1.992 0.436 C20 F96 24 F96 F F1 F 0 1 N N N 16.272 21.714 177.505 3.369 4.032 0.831 F F96 25 F96 N2 N3 N 0 1 Y N N 16.121 18.778 185.768 0.852 -4.154 0.026 N2 F96 26 F96 O1 O2 O 0 1 N N N 13.424 13.496 187.931 -4.087 2.732 1.168 O1 F96 27 F96 H1 H1 H 0 1 N N N 17.728 20.422 181.724 4.582 -1.763 -1.316 H1 F96 28 F96 H2 H2 H 0 1 N N N 12.576 16.975 185.043 -1.617 -2.197 2.348 H2 F96 29 F96 H3 H3 H 0 1 N N N 13.208 16.659 183.392 -0.478 -0.830 2.283 H3 F96 30 F96 H4 H4 H 0 1 N N N 15.030 13.307 186.616 -5.468 1.195 1.195 H4 F96 31 F96 H5 H5 H 0 1 N N N 13.317 10.913 187.433 -6.301 2.936 -0.341 H5 F96 32 F96 H6 H6 H 0 1 N N N 14.965 11.304 188.033 -4.858 2.742 -1.366 H6 F96 33 F96 H7 H7 H 0 1 N N N 15.013 9.562 186.248 -6.948 0.595 -0.774 H7 F96 34 F96 H8 H8 H 0 1 N N N 15.868 11.058 185.740 -6.749 1.469 -2.312 H8 F96 35 F96 H9 H9 H 0 1 N N N 12.994 10.333 185.115 -5.658 -0.764 -2.391 H9 F96 36 F96 H10 H10 H 0 1 N N N 14.385 10.224 183.985 -4.464 0.546 -2.547 H10 F96 37 F96 H11 H11 H 0 1 N N N 12.272 12.368 185.875 -3.055 1.117 -0.675 H11 F96 38 F96 H12 H12 H 0 1 N N N 17.975 20.258 184.171 3.408 -3.900 -1.258 H12 F96 39 F96 H13 H13 H 0 1 N N N 14.721 17.616 186.837 -1.029 -4.341 0.972 H13 F96 40 F96 H14 H14 H 0 1 N N N 14.706 12.572 184.317 -5.091 -0.929 -0.074 H14 F96 41 F96 H16 H16 H 0 1 N N N 12.205 14.763 186.134 -2.547 0.870 1.773 H16 F96 42 F96 H17 H17 H 0 1 N N N 12.027 14.272 184.415 -3.685 -0.497 1.837 H17 F96 43 F96 H18 H18 H 0 1 N N N 15.306 17.224 179.841 5.462 -0.198 -1.364 H18 F96 44 F96 H19 H19 H 0 1 N N N 15.409 17.333 177.391 6.660 1.950 -1.432 H19 F96 45 F96 H20 H20 H 0 1 N N N 15.951 19.472 176.259 5.671 3.948 -0.394 H20 F96 46 F96 H21 H21 H 0 1 N N N 16.324 21.373 180.056 2.262 1.670 0.788 H21 F96 47 F96 H22 H22 H 0 1 N N N 14.287 17.860 181.839 1.384 0.099 0.845 H22 F96 48 F96 H23 H23 H 0 1 N N N 13.981 13.441 188.698 -4.669 3.426 1.506 H23 F96 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal F96 C16 C15 DOUB Y N 1 F96 C16 C17 SING Y N 2 F96 F C17 SING N N 3 F96 C15 C14 SING Y N 4 F96 C17 C18 DOUB Y N 5 F96 C14 C13 DOUB Y N 6 F96 C18 C13 SING Y N 7 F96 C13 C12 SING N N 8 F96 C12 C11 DOUB Y N 9 F96 C12 C19 SING Y N 10 F96 C11 C10 SING Y N 11 F96 C19 C20 DOUB Y N 12 F96 C10 C9 DOUB Y N 13 F96 C20 C9 SING Y N 14 F96 C20 N1 SING Y N 15 F96 C9 N2 SING Y N 16 F96 C7 N1 SING N N 17 F96 C7 C SING N N 18 F96 N C3 SING N N 19 F96 N C2 SING N N 20 F96 N1 C8 SING Y N 21 F96 C3 C4 SING N N 22 F96 C O DOUB N N 23 F96 C C1 SING N N 24 F96 C1 C2 SING N N 25 F96 C2 C6 SING N N 26 F96 N2 C8 DOUB Y N 27 F96 C4 C5 SING N N 28 F96 C6 C5 SING N N 29 F96 C6 O1 SING N N 30 F96 C11 H1 SING N N 31 F96 C7 H2 SING N N 32 F96 C7 H3 SING N N 33 F96 C6 H4 SING N N 34 F96 C5 H5 SING N N 35 F96 C5 H6 SING N N 36 F96 C4 H7 SING N N 37 F96 C4 H8 SING N N 38 F96 C3 H9 SING N N 39 F96 C3 H10 SING N N 40 F96 C2 H11 SING N N 41 F96 C10 H12 SING N N 42 F96 C8 H13 SING N N 43 F96 N H14 SING N N 44 F96 C1 H16 SING N N 45 F96 C1 H17 SING N N 46 F96 C14 H18 SING N N 47 F96 C15 H19 SING N N 48 F96 C16 H20 SING N N 49 F96 C18 H21 SING N N 50 F96 C19 H22 SING N N 51 F96 O1 H23 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor F96 InChI InChI 1.03 "InChI=1S/C21H22FN3O2/c22-16-4-1-3-14(9-16)15-6-7-18-20(10-15)25(13-24-18)12-17(26)11-19-21(27)5-2-8-23-19/h1,3-4,6-7,9-10,13,19,21,23,27H,2,5,8,11-12H2/t19-,21+/m1/s1" F96 InChIKey InChI 1.03 VQOVGCNWRLIDFU-CTNGQTDRSA-N F96 SMILES_CANONICAL CACTVS 3.385 "O[C@H]1CCCN[C@@H]1CC(=O)Cn2cnc3ccc(cc23)c4cccc(F)c4" F96 SMILES CACTVS 3.385 "O[CH]1CCCN[CH]1CC(=O)Cn2cnc3ccc(cc23)c4cccc(F)c4" F96 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)F)c2ccc3c(c2)n(cn3)CC(=O)C[C@@H]4[C@H](CCCN4)O" F96 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)F)c2ccc3c(c2)n(cn3)CC(=O)CC4C(CCCN4)O" # _pdbx_chem_comp_identifier.comp_id F96 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[6-(3-fluorophenyl)benzimidazol-1-yl]-3-[(2~{R},3~{S})-3-oxidanylpiperidin-2-yl]propan-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site F96 "Create component" 2020-04-20 PDBJ F96 "Initial release" 2023-07-05 RCSB #