data_F99 # _chem_comp.id F99 _chem_comp.name "1-(5-chloranyl-4-methyl-benzimidazol-1-yl)-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H20 Cl N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-20 _chem_comp.pdbx_modified_date 2023-06-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 321.802 _chem_comp.one_letter_code ? _chem_comp.three_letter_code F99 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7BX3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal F99 C4 C1 C 0 1 Y N N -28.929 14.881 103.546 -2.027 0.973 -0.974 C4 F99 1 F99 C5 C2 C 0 1 Y N N -28.454 15.118 104.824 -1.883 -0.381 -0.704 C5 F99 2 F99 C6 C3 C 0 1 Y N N -27.395 15.995 105.099 -2.891 -1.069 -0.007 C6 F99 3 F99 N1 N1 N 0 1 Y N N -28.854 14.657 106.065 -0.901 -1.314 -0.973 N1 F99 4 F99 C2 C4 C 0 1 Y N N -27.275 16.424 102.751 -4.160 0.963 0.130 C2 F99 5 F99 N N2 N 0 1 Y N N -27.172 16.081 106.463 -2.481 -2.358 0.110 N F99 6 F99 C C5 C 0 1 N N N -25.554 17.511 104.260 -5.127 -1.106 1.149 C F99 7 F99 O O1 O 0 1 N N N -28.434 11.929 105.786 1.106 -0.407 0.448 O F99 8 F99 C1 C6 C 0 1 Y N N -26.770 16.648 104.026 -4.034 -0.380 0.407 C1 F99 9 F99 C10 C7 C 0 1 N N N -30.706 11.277 106.148 2.779 -0.227 -1.201 C10 F99 10 F99 C11 C8 C 0 1 N N R -30.322 9.835 106.504 3.624 0.272 -0.027 C11 F99 11 F99 C12 C9 C 0 1 N N N -29.367 7.805 105.649 4.570 -0.363 2.112 C12 F99 12 F99 C13 C10 C 0 1 N N N -28.559 7.575 106.870 5.968 0.069 1.663 C13 F99 13 F99 C14 C11 C 0 1 N N N -29.211 8.265 108.064 5.842 1.203 0.641 C14 F99 14 F99 C15 C12 C 0 1 N N S -29.487 9.727 107.774 4.993 0.724 -0.540 C15 F99 15 F99 C3 C13 C 0 1 Y N N -28.327 15.553 102.500 -3.158 1.639 -0.553 C3 F99 16 F99 C7 C14 C 0 1 Y N N -28.065 15.268 106.983 -1.318 -2.501 -0.455 C7 F99 17 F99 C8 C15 C 0 1 N N N -29.944 13.713 106.318 0.356 -1.071 -1.684 C8 F99 18 F99 C9 C16 C 0 1 N N N -29.568 12.266 106.061 1.390 -0.556 -0.716 C9 F99 19 F99 N2 N3 N 0 1 N N N -29.545 9.241 105.416 3.798 -0.814 0.947 N2 F99 20 F99 O1 O2 O 0 1 N N N -30.231 10.270 108.860 4.824 1.794 -1.471 O1 F99 21 F99 CL CL1 CL 0 0 N N N -26.613 17.302 101.412 -5.584 1.817 0.638 CL F99 22 F99 H1 H1 H 0 1 N N N -29.743 14.193 103.372 -1.254 1.504 -1.508 H1 F99 23 F99 H2 H2 H 0 1 N N N -25.870 18.550 104.438 -5.845 -1.508 0.434 H2 F99 24 F99 H3 H3 H 0 1 N N N -25.004 17.140 105.138 -4.694 -1.922 1.727 H3 F99 25 F99 H4 H4 H 0 1 N N N -24.901 17.472 103.375 -5.632 -0.412 1.821 H4 F99 26 F99 H5 H5 H 0 1 N N N -31.406 11.637 106.916 2.722 0.550 -1.964 H5 F99 27 F99 H6 H6 H 0 1 N N N -31.211 11.259 105.171 3.237 -1.120 -1.625 H6 F99 28 F99 H7 H7 H 0 1 N N N -31.247 9.257 106.646 3.120 1.112 0.452 H7 F99 29 F99 H8 H8 H 0 1 N N N -30.353 7.333 105.773 4.656 -1.180 2.828 H8 F99 30 F99 H9 H9 H 0 1 N N N -28.853 7.359 104.785 4.062 0.479 2.580 H9 F99 31 F99 H10 H10 H 0 1 N N N -28.493 6.494 107.065 6.535 0.418 2.525 H10 F99 32 F99 H11 H11 H 0 1 N N N -27.549 7.983 106.720 6.481 -0.777 1.206 H11 F99 33 F99 H12 H12 H 0 1 N N N -30.161 7.760 108.294 5.363 2.063 1.109 H12 F99 34 F99 H13 H13 H 0 1 N N N -28.538 8.193 108.931 6.833 1.486 0.287 H13 F99 35 F99 H14 H14 H 0 1 N N N -28.537 10.264 107.638 5.491 -0.112 -1.031 H14 F99 36 F99 H15 H15 H 0 1 N N N -28.674 15.401 101.489 -3.270 2.693 -0.764 H15 F99 37 F99 H16 H16 H 0 1 N N N -28.161 15.102 108.046 -0.764 -3.427 -0.505 H16 F99 38 F99 H17 H17 H 0 1 N N N -30.789 13.974 105.664 0.708 -2.002 -2.130 H17 F99 39 F99 H18 H18 H 0 1 N N N -30.251 13.811 107.370 0.193 -0.332 -2.469 H18 F99 40 F99 H19 H19 H 0 1 N N N -28.649 9.682 105.371 4.228 -1.619 0.517 H19 F99 41 F99 H21 H21 H 0 1 N N N -29.719 10.208 109.658 5.653 2.131 -1.838 H21 F99 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal F99 CL C2 SING N N 1 F99 C3 C2 DOUB Y N 2 F99 C3 C4 SING Y N 3 F99 C2 C1 SING Y N 4 F99 C4 C5 DOUB Y N 5 F99 C1 C SING N N 6 F99 C1 C6 DOUB Y N 7 F99 C5 C6 SING Y N 8 F99 C5 N1 SING Y N 9 F99 C6 N SING Y N 10 F99 N2 C12 SING N N 11 F99 N2 C11 SING N N 12 F99 C12 C13 SING N N 13 F99 O C9 DOUB N N 14 F99 C9 C10 SING N N 15 F99 C9 C8 SING N N 16 F99 N1 C8 SING N N 17 F99 N1 C7 SING Y N 18 F99 C10 C11 SING N N 19 F99 N C7 DOUB Y N 20 F99 C11 C15 SING N N 21 F99 C13 C14 SING N N 22 F99 C15 C14 SING N N 23 F99 C15 O1 SING N N 24 F99 C4 H1 SING N N 25 F99 C H2 SING N N 26 F99 C H3 SING N N 27 F99 C H4 SING N N 28 F99 C10 H5 SING N N 29 F99 C10 H6 SING N N 30 F99 C11 H7 SING N N 31 F99 C12 H8 SING N N 32 F99 C12 H9 SING N N 33 F99 C13 H10 SING N N 34 F99 C13 H11 SING N N 35 F99 C14 H12 SING N N 36 F99 C14 H13 SING N N 37 F99 C15 H14 SING N N 38 F99 C3 H15 SING N N 39 F99 C7 H16 SING N N 40 F99 C8 H17 SING N N 41 F99 C8 H18 SING N N 42 F99 N2 H19 SING N N 43 F99 O1 H21 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor F99 InChI InChI 1.03 "InChI=1S/C16H20ClN3O2/c1-10-12(17)4-5-14-16(10)19-9-20(14)8-11(21)7-13-15(22)3-2-6-18-13/h4-5,9,13,15,18,22H,2-3,6-8H2,1H3/t13-,15+/m1/s1" F99 InChIKey InChI 1.03 QGJXLDZCSUOUAE-HIFRSBDPSA-N F99 SMILES_CANONICAL CACTVS 3.385 "Cc1c(Cl)ccc2n(CC(=O)C[C@H]3NCCC[C@@H]3O)cnc12" F99 SMILES CACTVS 3.385 "Cc1c(Cl)ccc2n(CC(=O)C[CH]3NCCC[CH]3O)cnc12" F99 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(ccc2c1ncn2CC(=O)C[C@@H]3[C@H](CCCN3)O)Cl" F99 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(ccc2c1ncn2CC(=O)CC3C(CCCN3)O)Cl" # _pdbx_chem_comp_identifier.comp_id F99 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-(5-chloranyl-4-methyl-benzimidazol-1-yl)-3-[(2~{R},3~{S})-3-oxidanylpiperidin-2-yl]propan-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site F99 "Create component" 2020-04-20 PDBJ F99 "Initial release" 2023-07-05 RCSB #