data_FCJ
#
_chem_comp.id FCJ
_chem_comp.name "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]adenosine"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H18 N5 O11 P3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-03-22
_chem_comp.pdbx_modified_date 2018-07-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 489.209
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code FCJ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6CR5
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
FCJ C8 C1 C 0 1 Y N N 7.151 7.348 11.577 4.414 -0.491 -1.210 C8 FCJ 1
FCJ PA P1 P 0 1 N N N 5.056 5.115 14.849 -1.857 1.257 -0.833 PA FCJ 2
FCJ O1A O1 O 0 1 N N N 3.892 5.344 15.772 -1.577 0.822 -2.358 O1A FCJ 3
FCJ O2A O2 O 0 1 N N N 6.410 5.697 15.238 -2.436 2.618 -0.807 O2A FCJ 4
FCJ O3A O3 O 0 1 N N N 4.957 3.964 13.819 -2.889 0.221 -0.160 O3A FCJ 5
FCJ "O5'" O4 O 0 1 N N N 4.641 6.522 13.796 -0.473 1.246 -0.010 "O5'" FCJ 6
FCJ PB P2 P 0 1 N N N 3.873 2.565 13.895 -4.476 -0.019 -0.288 PB FCJ 7
FCJ O2B O5 O 0 1 N N N 3.829 2.226 12.425 -4.815 -0.345 -1.691 O2B FCJ 8
FCJ O1B O6 O 0 1 N N N 2.807 3.462 14.450 -5.257 1.317 0.156 O1B FCJ 9
FCJ C3B C2 C 0 1 N N N 4.488 1.328 14.868 -4.971 -1.400 0.794 C3B FCJ 10
FCJ PG P3 P 0 1 N N N 3.966 1.121 16.698 -6.768 -1.671 0.650 PG FCJ 11
FCJ O1G O7 O 0 1 N N N 3.502 2.490 17.147 -7.205 -2.891 1.605 O1G FCJ 12
FCJ O2G O8 O 0 1 N N N 5.236 0.687 17.434 -7.549 -0.335 1.094 O2G FCJ 13
FCJ O3G O9 O 0 1 N N N 2.913 0.036 16.737 -7.107 -1.997 -0.753 O3G FCJ 14
FCJ "C5'" C3 C 0 1 N N N 3.433 6.548 13.257 0.609 2.135 -0.296 "C5'" FCJ 15
FCJ "C4'" C4 C 0 1 N N R 3.565 6.638 11.684 1.764 1.859 0.669 "C4'" FCJ 16
FCJ "O4'" O10 O 0 1 N N N 4.360 7.786 11.296 2.358 0.572 0.395 "O4'" FCJ 17
FCJ "C1'" C5 C 0 1 N N R 5.049 7.539 10.073 3.685 0.596 0.948 "C1'" FCJ 18
FCJ N9 N1 N 0 1 Y N N 6.506 7.631 10.367 4.588 -0.196 0.109 N9 FCJ 19
FCJ C4 C6 C 0 1 Y N N 7.509 7.980 9.483 5.765 -0.778 0.508 C4 FCJ 20
FCJ N3 N2 N 0 1 Y N N 7.433 8.334 8.156 6.445 -0.833 1.649 N3 FCJ 21
FCJ C2 C7 C 0 1 Y N N 8.627 8.609 7.641 7.586 -1.486 1.719 C2 FCJ 22
FCJ N1 N3 N 0 1 Y N N 9.865 8.577 8.216 8.109 -2.112 0.680 N1 FCJ 23
FCJ C6 C8 C 0 1 Y N N 9.907 8.202 9.524 7.501 -2.112 -0.501 C6 FCJ 24
FCJ N6 N4 N 0 1 N N N 11.152 8.148 10.108 8.057 -2.771 -1.584 N6 FCJ 25
FCJ C5 C9 C 0 1 Y N N 8.731 7.901 10.215 6.280 -1.428 -0.626 C5 FCJ 26
FCJ N7 N5 N 0 1 Y N N 8.484 7.500 11.525 5.404 -1.218 -1.638 N7 FCJ 27
FCJ "C2'" C10 C 0 1 N N N 4.711 6.075 9.663 4.146 2.067 0.969 "C2'" FCJ 28
FCJ "C3'" C11 C 0 1 N N S 4.252 5.478 10.984 2.926 2.856 0.429 "C3'" FCJ 29
FCJ "O3'" O11 O 0 1 N N N 3.344 4.446 10.732 2.731 4.062 1.170 "O3'" FCJ 30
FCJ H1 H1 H 0 1 N N N 6.626 7.037 12.468 3.575 -0.172 -1.810 H1 FCJ 31
FCJ H2 H2 H 0 1 N N N 4.177 5.854 16.521 -1.196 -0.062 -2.451 H2 FCJ 32
FCJ H3 H3 H 0 1 N N N 2.209 3.712 13.755 -5.082 1.591 1.066 H3 FCJ 33
FCJ H4 H4 H 0 1 N N N 4.230 0.384 14.366 -4.442 -2.304 0.494 H4 FCJ 34
FCJ H5 H5 H 0 1 N N N 5.581 1.454 14.872 -4.722 -1.159 1.828 H5 FCJ 35
FCJ H6 H6 H 0 1 N N N 2.585 2.449 17.392 -8.151 -3.091 1.579 H6 FCJ 36
FCJ H7 H7 H 0 1 N N N 5.119 -0.191 17.778 -7.374 -0.061 2.004 H7 FCJ 37
FCJ H8 H8 H 0 1 N N N 2.883 7.424 13.630 0.946 1.980 -1.320 H8 FCJ 38
FCJ H9 H9 H 0 1 N N N 2.890 5.631 13.528 0.274 3.165 -0.176 H9 FCJ 39
FCJ H10 H10 H 0 1 N N N 2.551 6.741 11.270 1.421 1.911 1.702 H10 FCJ 40
FCJ H11 H11 H 0 1 N N N 4.755 8.239 9.277 3.672 0.194 1.961 H11 FCJ 41
FCJ H12 H12 H 0 1 N N N 8.616 8.905 6.602 8.113 -1.512 2.661 H12 FCJ 42
FCJ H13 H13 H 0 1 N N N 11.847 8.407 9.437 8.901 -3.240 -1.485 H13 FCJ 43
FCJ H14 H14 H 0 1 N N N 11.185 8.780 10.882 7.604 -2.764 -2.441 H14 FCJ 44
FCJ H15 H15 H 0 1 N N N 3.909 6.045 8.910 4.378 2.379 1.987 H15 FCJ 45
FCJ H16 H16 H 0 1 N N N 5.598 5.553 9.275 5.010 2.205 0.320 H16 FCJ 46
FCJ H17 H17 H 0 1 N N N 5.118 5.136 11.570 3.040 3.068 -0.634 H17 FCJ 47
FCJ H18 H18 H 0 1 N N N 3.526 3.715 11.310 3.474 4.679 1.121 H18 FCJ 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
FCJ C2 N3 DOUB Y N 1
FCJ C2 N1 SING Y N 2
FCJ N3 C4 SING Y N 3
FCJ N1 C6 DOUB Y N 4
FCJ C4 C5 DOUB Y N 5
FCJ C4 N9 SING Y N 6
FCJ C6 N6 SING N N 7
FCJ C6 C5 SING Y N 8
FCJ "C2'" "C1'" SING N N 9
FCJ "C2'" "C3'" SING N N 10
FCJ "C1'" N9 SING N N 11
FCJ "C1'" "O4'" SING N N 12
FCJ C5 N7 SING Y N 13
FCJ N9 C8 SING Y N 14
FCJ "O3'" "C3'" SING N N 15
FCJ "C3'" "C4'" SING N N 16
FCJ "O4'" "C4'" SING N N 17
FCJ N7 C8 DOUB Y N 18
FCJ "C4'" "C5'" SING N N 19
FCJ O2B PB DOUB N N 20
FCJ "C5'" "O5'" SING N N 21
FCJ "O5'" PA SING N N 22
FCJ O3A PB SING N N 23
FCJ O3A PA SING N N 24
FCJ PB O1B SING N N 25
FCJ PB C3B SING N N 26
FCJ PA O2A DOUB N N 27
FCJ PA O1A SING N N 28
FCJ C3B PG SING N N 29
FCJ PG O3G DOUB N N 30
FCJ PG O1G SING N N 31
FCJ PG O2G SING N N 32
FCJ C8 H1 SING N N 33
FCJ O1A H2 SING N N 34
FCJ O1B H3 SING N N 35
FCJ C3B H4 SING N N 36
FCJ C3B H5 SING N N 37
FCJ O1G H6 SING N N 38
FCJ O2G H7 SING N N 39
FCJ "C5'" H8 SING N N 40
FCJ "C5'" H9 SING N N 41
FCJ "C4'" H10 SING N N 42
FCJ "C1'" H11 SING N N 43
FCJ C2 H12 SING N N 44
FCJ N6 H13 SING N N 45
FCJ N6 H14 SING N N 46
FCJ "C2'" H15 SING N N 47
FCJ "C2'" H16 SING N N 48
FCJ "C3'" H17 SING N N 49
FCJ "O3'" H18 SING N N 50
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
FCJ SMILES ACDLabs 12.01 "c3n(C1OC(COP(=O)(O)OP(O)(CP(=O)(O)O)=O)C(C1)O)c2c(c(ncn2)N)n3"
FCJ InChI InChI 1.03 "InChI=1S/C11H18N5O11P3/c12-10-9-11(14-3-13-10)16(4-15-9)8-1-6(17)7(26-8)2-25-30(23,24)27-29(21,22)5-28(18,19)20/h3-4,6-8,17H,1-2,5H2,(H,21,22)(H,23,24)(H2,12,13,14)(H2,18,19,20)/t6-,7+,8+/m0/s1"
FCJ InChIKey InChI 1.03 GSNPMYZTZSIIIC-XLPZGREQSA-N
FCJ SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(cnc12)[C@H]3C[C@H](O)[C@@H](CO[P](O)(=O)O[P](O)(=O)C[P](O)(O)=O)O3"
FCJ SMILES CACTVS 3.385 "Nc1ncnc2n(cnc12)[CH]3C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)C[P](O)(O)=O)O3"
FCJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1nc(c2c(n1)n(cn2)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)OP(=O)(CP(=O)(O)O)O)O)N"
FCJ SMILES "OpenEye OEToolkits" 2.0.6 "c1nc(c2c(n1)n(cn2)C3CC(C(O3)COP(=O)(O)OP(=O)(CP(=O)(O)O)O)O)N"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
FCJ "SYSTEMATIC NAME" ACDLabs 12.01 "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]adenosine"
FCJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[[[(2~{R},3~{S},5~{R})-5-(6-aminopurin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]methylphosphonic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
FCJ "Create component" 2018-03-22 RCSB
FCJ "Initial release" 2018-07-18 RCSB
#