data_FD0 # _chem_comp.id FD0 _chem_comp.name "2-[2-[2-[2-[[5-oxidanylidene-5-[2-[4-[phenyl(propanoyl)amino]piperidin-1-yl]ethylamino]pentanoyl]amino]ethanoylamino]ethanoylamino]ethanoylamino]ethanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H43 N7 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-01-20 _chem_comp.pdbx_modified_date 2023-05-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 617.694 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FD0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7QT0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FD0 C10 C1 C 0 1 Y N N -51.255 6.685 61.449 11.898 -2.304 1.653 C10 FD0 1 FD0 C13 C2 C 0 1 N N N -55.040 9.986 60.110 9.962 -0.573 -1.872 C13 FD0 2 FD0 C17 C3 C 0 1 N N N -59.533 8.462 61.728 5.141 -0.232 -1.194 C17 FD0 3 FD0 C21 C4 C 0 1 N N N -60.029 7.809 65.630 1.505 -1.018 -0.287 C21 FD0 4 FD0 C22 C5 C 0 1 N N N -61.447 7.226 65.955 0.256 -0.248 -0.719 C22 FD0 5 FD0 C24 C6 C 0 1 N N N -63.314 7.383 67.703 -2.216 -0.156 -0.550 C24 FD0 6 FD0 C01 C7 C 0 1 N N N -51.661 8.856 55.764 11.225 2.816 2.769 C01 FD0 7 FD0 C02 C8 C 0 1 N N N -51.880 8.349 57.195 10.414 1.563 2.431 C02 FD0 8 FD0 C03 C9 C 0 1 N N N -53.256 8.786 57.790 10.005 1.606 0.981 C03 FD0 9 FD0 C06 C10 C 0 1 Y N N -52.878 7.202 59.755 11.462 -0.223 0.543 C06 FD0 10 FD0 C07 C11 C 0 1 Y N N -52.921 5.862 59.383 12.822 -0.066 0.309 C07 FD0 11 FD0 C08 C12 C 0 1 Y N N -52.125 4.939 60.043 13.712 -1.029 0.742 C08 FD0 12 FD0 C09 C13 C 0 1 Y N N -51.293 5.350 61.076 13.250 -2.147 1.413 C09 FD0 13 FD0 C11 C14 C 0 1 Y N N -52.052 7.613 60.788 11.002 -1.347 1.217 C11 FD0 14 FD0 C12 C15 C 0 1 N N N -55.015 8.541 59.730 10.211 0.833 -1.321 C12 FD0 15 FD0 C14 C16 C 0 1 N N N -56.224 10.236 61.043 8.773 -1.200 -1.141 C14 FD0 16 FD0 C16 C17 C 0 1 N N N -58.460 9.578 61.693 6.390 -1.003 -0.762 C16 FD0 17 FD0 C19 C18 C 0 1 N N N -60.020 8.537 64.253 2.729 -0.361 -0.873 C19 FD0 18 FD0 C23 C19 C 0 1 N N N -61.778 7.239 67.458 -0.985 -0.915 -0.124 C23 FD0 19 FD0 C43 C20 C 0 1 N N N -57.484 8.459 59.740 7.780 0.979 -0.769 C43 FD0 20 FD0 C44 C21 C 0 1 N N N -56.208 8.210 58.909 8.940 1.671 -1.489 C44 FD0 21 FD0 N05 N1 N 0 1 N N N -53.718 8.184 59.069 10.558 0.748 0.100 N05 FD0 22 FD0 N15 N2 N 0 1 N N N -57.221 9.116 61.057 7.582 -0.362 -1.333 N15 FD0 23 FD0 N18 N3 N 0 1 N N N -59.556 7.815 63.051 3.951 -0.871 -0.625 N18 FD0 24 FD0 N26 N4 N 0 1 N N N -64.258 6.477 67.017 -3.434 -0.564 -0.143 N26 FD0 25 FD0 O04 O1 O 0 1 N N N -53.913 9.589 57.211 9.179 2.411 0.607 O04 FD0 26 FD0 O20 O2 O 0 1 N N N -60.386 9.652 64.179 2.613 0.626 -1.568 O20 FD0 27 FD0 O25 O3 O 0 1 N N N -63.724 8.231 68.430 -2.110 0.822 -1.259 O25 FD0 28 FD0 H1 H1 H 0 1 N N N -50.607 7.004 62.252 11.541 -3.178 2.177 H1 FD0 29 FD0 H2 H2 H 0 1 N N N -54.104 10.248 60.624 9.744 -0.513 -2.938 H2 FD0 30 FD0 H3 H3 H 0 1 N N N -55.147 10.603 59.206 10.849 -1.188 -1.717 H3 FD0 31 FD0 H4 H4 H 0 1 N N N -60.520 8.901 61.522 5.207 0.796 -0.838 H4 FD0 32 FD0 H5 H5 H 0 1 N N N -59.299 7.710 60.960 5.069 -0.236 -2.282 H5 FD0 33 FD0 H6 H6 H 0 1 N N N -59.300 6.986 65.605 1.577 -1.014 0.800 H6 FD0 34 FD0 H7 H7 H 0 1 N N N -59.747 8.525 66.416 1.440 -2.046 -0.643 H7 FD0 35 FD0 H8 H8 H 0 1 N N N -62.202 7.826 65.426 0.322 0.780 -0.363 H8 FD0 36 FD0 H9 H9 H 0 1 N N N -61.488 6.187 65.597 0.185 -0.252 -1.807 H9 FD0 37 FD0 H10 H10 H 0 1 N N N -50.679 8.518 55.401 11.520 2.785 3.818 H10 FD0 38 FD0 H11 H11 H 0 1 N N N -52.451 8.459 55.109 12.115 2.852 2.142 H11 FD0 39 FD0 H12 H12 H 0 1 N N N -51.696 9.955 55.755 10.616 3.702 2.589 H12 FD0 40 FD0 H13 H13 H 0 1 N N N -51.833 7.250 57.189 11.022 0.677 2.612 H13 FD0 41 FD0 H14 H14 H 0 1 N N N -51.079 8.747 57.835 9.523 1.527 3.059 H14 FD0 42 FD0 H15 H15 H 0 1 N N N -53.572 5.542 58.583 13.183 0.806 -0.216 H15 FD0 43 FD0 H16 H16 H 0 1 N N N -52.152 3.899 59.753 14.769 -0.908 0.560 H16 FD0 44 FD0 H17 H17 H 0 1 N N N -50.675 4.629 61.590 13.948 -2.898 1.751 H17 FD0 45 FD0 H18 H18 H 0 1 N N N -52.027 8.653 61.080 9.945 -1.472 1.400 H18 FD0 46 FD0 H19 H19 H 0 1 N N N -55.081 7.956 60.659 11.030 1.300 -1.868 H19 FD0 47 FD0 H20 H20 H 0 1 N N N -55.840 10.373 62.065 8.584 -2.196 -1.541 H20 FD0 48 FD0 H21 H21 H 0 1 N N N -56.736 11.154 60.718 8.998 -1.273 -0.077 H21 FD0 49 FD0 H22 H22 H 0 1 N N N -58.237 9.891 62.724 6.461 -0.999 0.326 H22 FD0 50 FD0 H23 H23 H 0 1 N N N -58.854 10.435 61.127 6.324 -2.031 -1.118 H23 FD0 51 FD0 H24 H24 H 0 1 N N N -61.430 6.298 67.909 -1.051 -1.943 -0.481 H24 FD0 52 FD0 H25 H25 H 0 1 N N N -61.259 8.086 67.931 -0.914 -0.911 0.963 H25 FD0 53 FD0 H26 H26 H 0 1 N N N -58.158 9.104 59.158 8.009 0.896 0.293 H26 FD0 54 FD0 H27 H27 H 0 1 N N N -57.973 7.491 59.925 6.871 1.566 -0.900 H27 FD0 55 FD0 H28 H28 H 0 1 N N N -56.224 8.846 58.011 9.097 2.660 -1.060 H28 FD0 56 FD0 H29 H29 H 0 1 N N N -56.166 7.153 58.609 8.705 1.766 -2.549 H29 FD0 57 FD0 H31 H31 H 0 1 N N N -59.251 6.867 63.137 4.044 -1.661 -0.069 H31 FD0 58 FD0 H32 H32 H 0 1 N N N -65.169 6.104 67.192 -3.519 -1.347 0.424 H32 FD0 59 FD0 C1 C22 C 0 1 N N N ? ? ? -4.630 0.173 -0.557 C1 FD0 60 FD0 C2 C23 C 0 1 N N N ? ? ? -5.853 -0.484 0.029 C2 FD0 61 FD0 N1 N5 N 0 1 N N N ? ? ? -7.076 0.026 -0.219 N1 FD0 62 FD0 C4 C24 C 0 1 N N N ? ? ? -8.265 -0.613 0.351 C4 FD0 63 FD0 C5 C25 C 0 1 N N N ? ? ? -9.496 0.146 -0.075 C5 FD0 64 FD0 N2 N6 N 0 1 N N N ? ? ? -10.714 -0.262 0.333 N2 FD0 65 FD0 C7 C26 C 0 1 N N N ? ? ? -11.910 0.475 -0.081 C7 FD0 66 FD0 C8 C27 C 0 1 N N N ? ? ? -13.133 -0.182 0.504 C8 FD0 67 FD0 N3 N7 N 0 1 N N N ? ? ? -14.356 0.328 0.256 N3 FD0 68 FD0 C15 C28 C 0 1 N N N ? ? ? -15.545 -0.311 0.826 C15 FD0 69 FD0 C18 C29 C 0 1 N N N ? ? ? -16.775 0.448 0.400 C18 FD0 70 FD0 O4 O4 O 0 1 N N N ? ? ? -17.989 0.042 0.806 O4 FD0 71 FD0 O1 O5 O 0 1 N N N ? ? ? -5.737 -1.471 0.724 O1 FD0 72 FD0 O2 O6 O 0 1 N N N ? ? ? -9.390 1.124 -0.784 O2 FD0 73 FD0 O3 O7 O 0 1 N N N ? ? ? -13.017 -1.169 1.199 O3 FD0 74 FD0 O5 O8 O 0 1 N N N ? ? ? -16.670 1.423 -0.306 O5 FD0 75 FD0 H30 H30 H 0 1 N N N ? ? ? -4.564 1.202 -0.200 H30 FD0 76 FD0 H33 H33 H 0 1 N N N ? ? ? -4.701 0.169 -1.644 H33 FD0 77 FD0 H34 H34 H 0 1 N N N ? ? ? -7.169 0.816 -0.775 H34 FD0 78 FD0 H35 H35 H 0 1 N N N ? ? ? -8.331 -1.641 -0.005 H35 FD0 79 FD0 H36 H36 H 0 1 N N N ? ? ? -8.194 -0.609 1.438 H36 FD0 80 FD0 H37 H37 H 0 1 N N N ? ? ? -10.798 -1.044 0.900 H37 FD0 81 FD0 H38 H38 H 0 1 N N N ? ? ? -11.844 1.504 0.275 H38 FD0 82 FD0 H39 H39 H 0 1 N N N ? ? ? -11.981 0.472 -1.169 H39 FD0 83 FD0 H40 H40 H 0 1 N N N ? ? ? -14.449 1.118 -0.299 H40 FD0 84 FD0 H41 H41 H 0 1 N N N ? ? ? -15.611 -1.339 0.470 H41 FD0 85 FD0 H42 H42 H 0 1 N N N ? ? ? -15.474 -0.307 1.913 H42 FD0 86 FD0 H43 H43 H 0 1 N N N ? ? ? -18.748 0.560 0.507 H43 FD0 87 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FD0 C01 C02 SING N N 1 FD0 C02 C03 SING N N 2 FD0 O04 C03 DOUB N N 3 FD0 C03 N05 SING N N 4 FD0 C44 C12 SING N N 5 FD0 C44 C43 SING N N 6 FD0 N05 C12 SING N N 7 FD0 N05 C06 SING N N 8 FD0 C07 C06 DOUB Y N 9 FD0 C07 C08 SING Y N 10 FD0 C12 C13 SING N N 11 FD0 C43 N15 SING N N 12 FD0 C06 C11 SING Y N 13 FD0 C08 C09 DOUB Y N 14 FD0 C13 C14 SING N N 15 FD0 C11 C10 DOUB Y N 16 FD0 C14 N15 SING N N 17 FD0 N15 C16 SING N N 18 FD0 C09 C10 SING Y N 19 FD0 C16 C17 SING N N 20 FD0 C17 N18 SING N N 21 FD0 N18 C19 SING N N 22 FD0 O20 C19 DOUB N N 23 FD0 C19 C21 SING N N 24 FD0 C21 C22 SING N N 25 FD0 C22 C23 SING N N 26 FD0 N26 C24 SING N N 27 FD0 C23 C24 SING N N 28 FD0 C24 O25 DOUB N N 29 FD0 C10 H1 SING N N 30 FD0 C13 H2 SING N N 31 FD0 C13 H3 SING N N 32 FD0 C17 H4 SING N N 33 FD0 C17 H5 SING N N 34 FD0 C21 H6 SING N N 35 FD0 C21 H7 SING N N 36 FD0 C22 H8 SING N N 37 FD0 C22 H9 SING N N 38 FD0 C01 H10 SING N N 39 FD0 C01 H11 SING N N 40 FD0 C01 H12 SING N N 41 FD0 C02 H13 SING N N 42 FD0 C02 H14 SING N N 43 FD0 C07 H15 SING N N 44 FD0 C08 H16 SING N N 45 FD0 C09 H17 SING N N 46 FD0 C11 H18 SING N N 47 FD0 C12 H19 SING N N 48 FD0 C14 H20 SING N N 49 FD0 C14 H21 SING N N 50 FD0 C16 H22 SING N N 51 FD0 C16 H23 SING N N 52 FD0 C23 H24 SING N N 53 FD0 C23 H25 SING N N 54 FD0 C43 H26 SING N N 55 FD0 C43 H27 SING N N 56 FD0 C44 H28 SING N N 57 FD0 C44 H29 SING N N 58 FD0 N18 H31 SING N N 59 FD0 N26 H32 SING N N 60 FD0 N26 C1 SING N N 61 FD0 C1 C2 SING N N 62 FD0 C2 N1 SING N N 63 FD0 N1 C4 SING N N 64 FD0 C4 C5 SING N N 65 FD0 C5 N2 SING N N 66 FD0 N2 C7 SING N N 67 FD0 C7 C8 SING N N 68 FD0 C8 N3 SING N N 69 FD0 N3 C15 SING N N 70 FD0 C15 C18 SING N N 71 FD0 C18 O4 SING N N 72 FD0 C2 O1 DOUB N N 73 FD0 C5 O2 DOUB N N 74 FD0 C8 O3 DOUB N N 75 FD0 C18 O5 DOUB N N 76 FD0 C1 H30 SING N N 77 FD0 C1 H33 SING N N 78 FD0 N1 H34 SING N N 79 FD0 C4 H35 SING N N 80 FD0 C4 H36 SING N N 81 FD0 N2 H37 SING N N 82 FD0 C7 H38 SING N N 83 FD0 C7 H39 SING N N 84 FD0 N3 H40 SING N N 85 FD0 C15 H41 SING N N 86 FD0 C15 H42 SING N N 87 FD0 O4 H43 SING N N 88 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FD0 InChI InChI 1.06 "InChI=1S/C29H43N7O8/c1-2-28(42)36(21-7-4-3-5-8-21)22-11-14-35(15-12-22)16-13-30-23(37)9-6-10-24(38)31-17-25(39)32-18-26(40)33-19-27(41)34-20-29(43)44/h3-5,7-8,22H,2,6,9-20H2,1H3,(H,30,37)(H,31,38)(H,32,39)(H,33,40)(H,34,41)(H,43,44)" FD0 InChIKey InChI 1.06 WBAFWCQXKNZRIF-UHFFFAOYSA-N FD0 SMILES_CANONICAL CACTVS 3.385 "CCC(=O)N(C1CCN(CCNC(=O)CCCC(=O)NCC(=O)NCC(=O)NCC(=O)NCC(O)=O)CC1)c2ccccc2" FD0 SMILES CACTVS 3.385 "CCC(=O)N(C1CCN(CCNC(=O)CCCC(=O)NCC(=O)NCC(=O)NCC(=O)NCC(O)=O)CC1)c2ccccc2" FD0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(c1ccccc1)C2CCN(CC2)CCNC(=O)CCCC(=O)NCC(=O)NCC(=O)NCC(=O)NCC(=O)O" FD0 SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(c1ccccc1)C2CCN(CC2)CCNC(=O)CCCC(=O)NCC(=O)NCC(=O)NCC(=O)NCC(=O)O" # _pdbx_chem_comp_identifier.comp_id FD0 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[2-[2-[2-[[5-oxidanylidene-5-[2-[4-[phenyl(propanoyl)amino]piperidin-1-yl]ethylamino]pentanoyl]amino]ethanoylamino]ethanoylamino]ethanoylamino]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FD0 "Create component" 2022-01-20 PDBE FD0 "Modify descriptor" 2022-08-22 RCSB FD0 "Initial release" 2023-05-24 RCSB #