data_FD3 # _chem_comp.id FD3 _chem_comp.name "N-ALPHA-(2-NAPHTHYLSULFONYL)-3-AMIDINO-L-PHENYLALANINE PIPERAZIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H27 N5 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2001-10-19 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 465.568 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FD3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1K1L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FD3 C65 C65 C 0 1 Y N N -3.245 5.748 20.208 -0.606 0.814 2.960 C65 FD3 1 FD3 C66 C66 C 0 1 Y N N -3.813 7.028 20.103 -0.634 -0.502 3.369 C66 FD3 2 FD3 C64 C64 C 0 1 Y N N -1.896 5.564 19.825 0.221 1.721 3.597 C64 FD3 3 FD3 C63 C63 C 0 1 Y N N -1.128 6.645 19.371 1.019 1.316 4.652 C63 FD3 4 FD3 C62 C62 C 0 1 Y N N -1.707 7.924 19.276 0.994 0.003 5.074 C62 FD3 5 FD3 C61 C61 C 0 1 Y N N -3.056 8.117 19.640 0.162 -0.916 4.436 C61 FD3 6 FD3 C25 C25 C 0 1 N N N -3.694 9.474 19.544 0.131 -2.327 4.884 C25 FD3 7 FD3 N43 N43 N 0 1 N N N -2.981 10.491 19.139 0.924 -2.733 5.935 N43 FD3 8 FD3 N54 N54 N 0 1 N N N -4.956 9.614 19.886 -0.646 -3.183 4.286 N54 FD3 9 FD3 C34 C34 C 0 1 N N N -4.090 4.560 20.713 -1.473 1.265 1.812 C34 FD3 10 FD3 C31 C31 C 0 1 N N S -4.052 4.382 22.242 -0.706 1.099 0.499 C31 FD3 11 FD3 C35 C35 C 0 1 N N N -2.733 4.759 22.885 -1.573 1.549 -0.648 C35 FD3 12 FD3 O36 O36 O 0 1 N N N -2.706 5.896 23.353 -1.519 2.698 -1.035 O36 FD3 13 FD3 N81 N81 N 0 1 N N N -1.653 3.922 22.912 -2.408 0.676 -1.244 N81 FD3 14 FD3 C71 C71 C 0 1 N N N -1.595 2.734 22.030 -2.576 -0.690 -0.724 C71 FD3 15 FD3 C72 C72 C 0 1 N N N -1.119 1.567 22.931 -4.075 -0.982 -0.606 C72 FD3 16 FD3 C74 C74 C 0 1 N N N 0.130 3.304 24.376 -4.645 0.658 -2.211 C74 FD3 17 FD3 C75 C75 C 0 1 N N N -0.372 4.427 23.437 -3.187 1.060 -2.432 C75 FD3 18 FD3 N40 N40 N 0 1 N N N -0.025 1.937 23.806 -4.721 -0.774 -1.907 N40 FD3 19 FD3 N29 N29 N 0 1 N N N -5.156 5.101 22.893 0.511 1.912 0.539 N29 FD3 20 FD3 S12 S12 S 0 1 N N N -6.016 4.356 24.182 1.982 1.215 0.233 S12 FD3 21 FD3 O32 O32 O 0 1 N N N -7.070 5.238 24.608 2.913 2.288 0.178 O32 FD3 22 FD3 O33 O33 O 0 1 N N N -6.266 2.988 23.875 2.068 0.096 1.105 O33 FD3 23 FD3 C2 C2 C 0 1 Y N N -4.759 4.410 25.360 1.921 0.549 -1.396 C2 FD3 24 FD3 C3 C3 C 0 1 Y N N -4.471 5.648 25.958 2.304 1.343 -2.476 C3 FD3 25 FD3 C4 C4 C 0 1 Y N N -3.443 5.755 26.929 2.269 0.859 -3.748 C4 FD3 26 FD3 C9 C9 C 0 1 Y N N -3.019 3.330 26.677 1.452 -1.265 -2.880 C9 FD3 27 FD3 C10 C10 C 0 1 Y N N -2.710 4.586 27.297 1.841 -0.458 -3.979 C10 FD3 28 FD3 C1 C1 C 0 1 Y N N -4.054 3.259 25.707 1.507 -0.733 -1.581 C1 FD3 29 FD3 C5 C5 C 0 1 Y N N -1.668 4.628 28.275 1.791 -0.993 -5.277 C5 FD3 30 FD3 C6 C6 C 0 1 Y N N -0.945 3.441 28.625 1.372 -2.275 -5.463 C6 FD3 31 FD3 C7 C7 C 0 1 Y N N -1.266 2.211 28.000 0.989 -3.068 -4.383 C7 FD3 32 FD3 C8 C8 C 0 1 Y N N -2.291 2.150 27.033 1.024 -2.584 -3.111 C8 FD3 33 FD3 H661 1H66 H 0 0 N N N -4.868 7.180 20.388 -1.281 -1.210 2.871 H661 FD3 34 FD3 H641 1H64 H 0 0 N N N -1.436 4.563 19.881 0.244 2.750 3.270 H641 FD3 35 FD3 H631 1H63 H 0 0 N N N -0.073 6.490 19.090 1.663 2.029 5.145 H631 FD3 36 FD3 H621 1H62 H 0 0 N N N -1.104 8.775 18.917 1.618 -0.312 5.898 H621 FD3 37 FD3 H431 1H43 H 0 0 N N N -2.568 10.260 18.235 0.904 -3.658 6.229 H431 FD3 38 FD3 H432 2H43 H 0 0 N N N -3.414 11.412 19.074 1.507 -2.097 6.378 H432 FD3 39 FD3 H541 1H54 H 0 0 N N N -5.351 10.516 19.621 -1.205 -2.897 3.547 H541 FD3 40 FD3 H341 1H34 H 0 0 N N N -3.791 3.617 20.199 -2.379 0.660 1.783 H341 FD3 41 FD3 H342 2H34 H 0 0 N N N -5.142 4.643 20.352 -1.739 2.313 1.948 H342 FD3 42 FD3 H311 1H31 H 0 0 N N N -4.174 3.286 22.403 -0.439 0.051 0.363 H311 FD3 43 FD3 H711 1H71 H 0 0 N N N -0.966 2.882 21.121 -2.116 -1.402 -1.410 H711 FD3 44 FD3 H712 2H71 H 0 0 N N N -2.552 2.526 21.497 -2.107 -0.769 0.256 H712 FD3 45 FD3 H721 1H72 H 0 0 N N N -0.854 0.674 22.318 -4.220 -2.015 -0.289 H721 FD3 46 FD3 H722 2H72 H 0 0 N N N -1.969 1.142 23.514 -4.518 -0.311 0.130 H722 FD3 47 FD3 H741 1H74 H 0 0 N N N -0.364 3.374 25.373 -5.221 0.870 -3.112 H741 FD3 48 FD3 H742 2H74 H 0 0 N N N 1.187 3.487 24.679 -5.053 1.229 -1.377 H742 FD3 49 FD3 H751 1H75 H 0 0 N N N -0.442 5.429 23.922 -3.122 2.138 -2.583 H751 FD3 50 FD3 H752 2H75 H 0 0 N N N 0.359 4.722 22.648 -2.792 0.543 -3.307 H752 FD3 51 FD3 H401 1H40 H 0 0 N N N 0.844 1.707 23.323 -5.698 -0.993 -1.784 H401 FD3 52 FD3 H291 1H29 H 0 0 N N N -5.825 5.384 22.177 0.456 2.859 0.744 H291 FD3 53 FD3 H31 1H3 H 0 1 N N N -5.053 6.538 25.665 2.633 2.357 -2.302 H31 FD3 54 FD3 H41 1H4 H 0 1 N N N -3.217 6.731 27.390 2.568 1.486 -4.575 H41 FD3 55 FD3 H11 1H1 H 0 1 N N N -4.312 2.304 25.220 1.218 -1.337 -0.734 H11 FD3 56 FD3 H51 1H5 H 0 1 N N N -1.420 5.585 28.764 2.085 -0.390 -6.124 H51 FD3 57 FD3 H61 1H6 H 0 1 N N N -0.139 3.474 29.378 1.335 -2.683 -6.462 H61 FD3 58 FD3 H71 1H7 H 0 1 N N N -0.714 1.295 28.268 0.660 -4.081 -4.557 H71 FD3 59 FD3 H81 1H8 H 0 1 N N N -2.522 1.183 26.557 0.724 -3.210 -2.284 H81 FD3 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FD3 C65 C66 DOUB Y N 1 FD3 C65 C64 SING Y N 2 FD3 C65 C34 SING N N 3 FD3 C66 C61 SING Y N 4 FD3 C66 H661 SING N N 5 FD3 C64 C63 DOUB Y N 6 FD3 C64 H641 SING N N 7 FD3 C63 C62 SING Y N 8 FD3 C63 H631 SING N N 9 FD3 C62 C61 DOUB Y N 10 FD3 C62 H621 SING N N 11 FD3 C61 C25 SING N N 12 FD3 C25 N43 SING N N 13 FD3 C25 N54 DOUB N Z 14 FD3 N43 H431 SING N N 15 FD3 N43 H432 SING N N 16 FD3 N54 H541 SING N N 17 FD3 C34 C31 SING N N 18 FD3 C34 H341 SING N N 19 FD3 C34 H342 SING N N 20 FD3 C31 C35 SING N N 21 FD3 C31 N29 SING N N 22 FD3 C31 H311 SING N N 23 FD3 C35 O36 DOUB N N 24 FD3 C35 N81 SING N N 25 FD3 N81 C71 SING N N 26 FD3 N81 C75 SING N N 27 FD3 C71 C72 SING N N 28 FD3 C71 H711 SING N N 29 FD3 C71 H712 SING N N 30 FD3 C72 N40 SING N N 31 FD3 C72 H721 SING N N 32 FD3 C72 H722 SING N N 33 FD3 C74 C75 SING N N 34 FD3 C74 N40 SING N N 35 FD3 C74 H741 SING N N 36 FD3 C74 H742 SING N N 37 FD3 C75 H751 SING N N 38 FD3 C75 H752 SING N N 39 FD3 N40 H401 SING N N 40 FD3 N29 S12 SING N N 41 FD3 N29 H291 SING N N 42 FD3 S12 O32 DOUB N N 43 FD3 S12 O33 DOUB N N 44 FD3 S12 C2 SING N N 45 FD3 C2 C3 DOUB Y N 46 FD3 C2 C1 SING Y N 47 FD3 C3 C4 SING Y N 48 FD3 C3 H31 SING N N 49 FD3 C4 C10 DOUB Y N 50 FD3 C4 H41 SING N N 51 FD3 C9 C10 SING Y N 52 FD3 C9 C1 DOUB Y N 53 FD3 C9 C8 SING Y N 54 FD3 C10 C5 SING Y N 55 FD3 C1 H11 SING N N 56 FD3 C5 C6 DOUB Y N 57 FD3 C5 H51 SING N N 58 FD3 C6 C7 SING Y N 59 FD3 C6 H61 SING N N 60 FD3 C7 C8 DOUB Y N 61 FD3 C7 H71 SING N N 62 FD3 C8 H81 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FD3 SMILES ACDLabs 10.04 "O=C(N1CCNCC1)C(NS(=O)(=O)c3cc2ccccc2cc3)Cc4cc(C(=[N@H])N)ccc4" FD3 SMILES_CANONICAL CACTVS 3.341 "NC(=N)c1cccc(C[C@H](N[S](=O)(=O)c2ccc3ccccc3c2)C(=O)N4CCNCC4)c1" FD3 SMILES CACTVS 3.341 "NC(=N)c1cccc(C[CH](N[S](=O)(=O)c2ccc3ccccc3c2)C(=O)N4CCNCC4)c1" FD3 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "[H]/N=C(/c1cccc(c1)C[C@@H](C(=O)N2CCNCC2)NS(=O)(=O)c3ccc4ccccc4c3)\N" FD3 SMILES "OpenEye OEToolkits" 1.5.0 "[H]N=C(c1cccc(c1)CC(C(=O)N2CCNCC2)NS(=O)(=O)c3ccc4ccccc4c3)N" FD3 InChI InChI 1.03 "InChI=1S/C24H27N5O3S/c25-23(26)20-7-3-4-17(14-20)15-22(24(30)29-12-10-27-11-13-29)28-33(31,32)21-9-8-18-5-1-2-6-19(18)16-21/h1-9,14,16,22,27-28H,10-13,15H2,(H3,25,26)/t22-/m0/s1" FD3 InChIKey InChI 1.03 ZVDMTWWOKZXJOE-QFIPXVFZSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FD3 "SYSTEMATIC NAME" ACDLabs 10.04 "3-{(2S)-2-[(naphthalen-2-ylsulfonyl)amino]-3-oxo-3-piperazin-1-ylpropyl}benzenecarboximidamide" FD3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-[(2S)-2-(naphthalen-2-ylsulfonylamino)-3-oxo-3-piperazin-1-yl-propyl]benzenecarboximidamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FD3 "Create component" 2001-10-19 RCSB FD3 "Modify descriptor" 2011-06-04 RCSB #