data_FF9 # _chem_comp.id FF9 _chem_comp.name "(2S)-2-azanyl-6-[(E)-(1-oxidanyl-1-oxidanylidene-butan-2-ylidene)amino]hexanoic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C10 H18 N2 O4" _chem_comp.mon_nstd_parent_comp_id LYS _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-05-08 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 230.261 _chem_comp.one_letter_code K _chem_comp.three_letter_code FF9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7C0E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FF9 C2 C2 C 0 1 N N N N N N 44.763 20.244 -9.962 -3.413 2.462 -0.207 C2 FF9 1 FF9 C1 C1 C 0 1 N N N N N N 43.566 21.143 -9.747 -3.078 1.335 0.772 C1 FF9 2 FF9 N N N 0 1 N N N Y Y N 38.680 26.174 -15.408 4.056 0.424 -1.642 N FF9 3 FF9 CA CA C 0 1 N N S Y N N 38.953 24.940 -14.651 3.786 0.448 -0.199 CA FF9 4 FF9 C C C 0 1 N N N Y N Y 37.843 24.770 -13.652 4.946 -0.170 0.539 C FF9 5 FF9 O O O 0 1 N N N Y N Y 37.859 25.432 -12.591 5.714 -0.898 -0.044 O FF9 6 FF9 CB CB C 0 1 N N N N N N 40.319 25.037 -13.979 2.513 -0.348 0.095 CB FF9 7 FF9 CG CG C 0 1 N N N N N N 40.786 23.748 -13.318 1.314 0.350 -0.551 CG FF9 8 FF9 CD CD C 0 1 N N N N N N 41.910 24.087 -12.343 0.041 -0.446 -0.257 CD FF9 9 FF9 CE CE C 0 1 N N N N N N 42.621 22.842 -11.833 -1.157 0.252 -0.904 CE FF9 10 FF9 NZ NZ N 0 1 N N N N N N 43.472 23.309 -10.745 -2.376 -0.510 -0.623 NZ FF9 11 FF9 CX1 CX1 C 0 1 N N N N N N 43.931 22.611 -9.794 -3.299 0.004 0.102 CX1 FF9 12 FF9 CX2 CX2 C 0 1 N N N N N N 44.770 23.249 -8.775 -4.585 -0.711 0.280 CX2 FF9 13 FF9 O1 O1 O 0 1 N N N N N N 44.292 24.157 -8.069 -4.783 -1.901 -0.319 O1 FF9 14 FF9 O2 O2 O 0 1 N N N N N N 45.949 22.880 -8.620 -5.460 -0.225 0.967 O2 FF9 15 FF9 OXT OXT O 0 1 N Y N Y N Y 36.862 23.932 -13.967 5.126 0.089 1.844 OXT FF9 16 FF9 H1 H1 H 0 1 N N N N N N 44.445 19.192 -9.919 -2.769 2.385 -1.083 H1 FF9 17 FF9 H20 H2 H 0 1 N N N N N N 45.206 20.453 -10.947 -4.455 2.378 -0.514 H2 FF9 18 FF9 H3 H3 H 0 1 N N N N N N 45.510 20.434 -9.177 -3.252 3.424 0.278 H3 FF9 19 FF9 H4 H4 H 0 1 N N N N N N 42.825 20.938 -10.533 -2.035 1.418 1.079 H4 FF9 20 FF9 H5 H5 H 0 1 N N N N N N 43.128 20.919 -8.763 -3.721 1.412 1.649 H5 FF9 21 FF9 H H6 H 0 1 N N N Y Y N 37.784 26.105 -15.846 4.855 0.996 -1.870 H6 FF9 22 FF9 H2 H7 H 0 1 N Y N Y Y N 38.687 26.956 -14.785 4.182 -0.521 -1.972 H7 FF9 23 FF9 HA H9 H 0 1 N N N Y N N 38.955 24.080 -15.337 3.654 1.479 0.130 H9 FF9 24 FF9 H10 H10 H 0 1 N N N N N N 41.059 25.320 -14.742 2.611 -1.354 -0.312 H10 FF9 25 FF9 H11 H11 H 0 1 N N N N N N 40.269 25.820 -13.208 2.361 -0.406 1.173 H11 FF9 26 FF9 H12 H12 H 0 1 N N N N N N 39.949 23.285 -12.774 1.217 1.356 -0.144 H12 FF9 27 FF9 H13 H13 H 0 1 N N N N N N 41.156 23.051 -14.084 1.466 0.408 -1.629 H13 FF9 28 FF9 H14 H14 H 0 1 N N N N N N 42.642 24.729 -12.855 0.139 -1.452 -0.665 H14 FF9 29 FF9 H15 H15 H 0 1 N N N N N N 41.484 24.629 -11.485 -0.111 -0.503 0.821 H15 FF9 30 FF9 H16 H16 H 0 1 N N N N N N 41.892 22.105 -11.464 -1.255 1.258 -0.496 H16 FF9 31 FF9 H17 H17 H 0 1 N N N N N N 43.228 22.390 -12.631 -1.005 0.310 -1.982 H17 FF9 32 FF9 H18 H18 H 0 1 N N N N N N 44.952 24.466 -7.460 -5.638 -2.329 -0.173 H18 FF9 33 FF9 HXT HXT H 0 1 N Y N Y N Y 36.212 23.930 -13.274 5.884 -0.331 2.274 H19 FF9 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FF9 N CA SING N N 1 FF9 CA CB SING N N 2 FF9 CA C SING N N 3 FF9 CB CG SING N N 4 FF9 C O DOUB N N 5 FF9 CG CD SING N N 6 FF9 CD CE SING N N 7 FF9 CE NZ SING N N 8 FF9 NZ CX1 DOUB N N 9 FF9 C2 C1 SING N N 10 FF9 CX1 C1 SING N N 11 FF9 CX1 CX2 SING N N 12 FF9 CX2 O2 DOUB N N 13 FF9 CX2 O1 SING N N 14 FF9 C OXT SING N N 15 FF9 C2 H1 SING N N 16 FF9 C2 H20 SING N N 17 FF9 C2 H3 SING N N 18 FF9 C1 H4 SING N N 19 FF9 C1 H5 SING N N 20 FF9 N H SING N N 21 FF9 N H2 SING N N 22 FF9 CA HA SING N N 23 FF9 CB H10 SING N N 24 FF9 CB H11 SING N N 25 FF9 CG H12 SING N N 26 FF9 CG H13 SING N N 27 FF9 CD H14 SING N N 28 FF9 CD H15 SING N N 29 FF9 CE H16 SING N N 30 FF9 CE H17 SING N N 31 FF9 O1 H18 SING N N 32 FF9 OXT HXT SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FF9 InChI InChI 1.03 "InChI=1S/C10H18N2O4/c1-2-8(10(15)16)12-6-4-3-5-7(11)9(13)14/h7H,2-6,11H2,1H3,(H,13,14)(H,15,16)/b12-8+/t7-/m0/s1" FF9 InChIKey InChI 1.03 CWKRAMLJAYWANT-ZMMCGQQISA-N FF9 SMILES_CANONICAL CACTVS 3.385 "CCC(=NCCCC[C@H](N)C(O)=O)C(O)=O" FF9 SMILES CACTVS 3.385 "CCC(=NCCCC[CH](N)C(O)=O)C(O)=O" FF9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC/C(=N\CCCC[C@@H](C(=O)O)N)/C(=O)O" FF9 SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=NCCCCC(C(=O)O)N)C(=O)O" # _pdbx_chem_comp_identifier.comp_id FF9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-azanyl-6-[(~{E})-(1-oxidanyl-1-oxidanylidene-butan-2-ylidene)amino]hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FF9 "Create component" 2020-05-08 PDBJ FF9 "Initial release" 2020-08-05 RCSB FF9 "Modify backbone" 2023-11-03 PDBE #