data_FH7 # _chem_comp.id FH7 _chem_comp.name N^5^-formyl-N^5^-hydroxy-D-ornithine _chem_comp.type "PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C6 H12 N2 O4" _chem_comp.mon_nstd_parent_comp_id LYS _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-12-20 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 176.170 _chem_comp.one_letter_code K _chem_comp.three_letter_code FH7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2W77 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FH7 N N N 0 1 N N N Y Y N -66.540 -42.066 26.558 -1.993 1.425 1.091 N FH7 1 FH7 CA CA C 0 1 N N R Y N N -65.229 -41.787 27.183 -2.022 0.049 0.577 CA FH7 2 FH7 CB CB C 0 1 N N N N N N -64.157 -41.423 26.136 -0.956 -0.112 -0.509 CB FH7 3 FH7 CG CG C 0 1 N N N N N N -64.436 -40.196 25.239 0.433 0.060 0.110 CG FH7 4 FH7 CD CD C 0 1 N N N N N N -63.111 -39.742 24.619 1.498 -0.101 -0.976 CD FH7 5 FH7 NE NE N 0 1 N N N N N N -63.212 -38.758 23.549 2.828 0.063 -0.384 NE FH7 6 FH7 OZ OZ O 0 1 N N N N N N -63.653 -39.057 22.454 3.556 1.258 -0.600 OZ FH7 7 FH7 CZ CZ C 0 1 N N N N N N -62.767 -37.596 23.770 3.358 -0.922 0.367 CZ FH7 8 FH7 OH OH O 0 1 N N N N N N -62.755 -36.656 22.978 4.459 -0.786 0.858 OH FH7 9 FH7 C C C 0 1 N N N Y N Y -64.879 -42.995 28.004 -3.381 -0.242 -0.006 C FH7 10 FH7 O O O 0 1 N N N Y N Y -64.381 -43.960 27.475 -4.107 0.669 -0.328 O FH7 11 FH7 OXT OX0 O 0 1 N Y N Y N Y -65.173 -42.980 29.302 -3.785 -1.512 -0.167 OX0 FH7 12 FH7 H HN1 H 0 1 N N N Y Y N -67.242 -42.129 27.268 -1.114 1.623 1.545 HN1 FH7 13 FH7 H2 HN2 H 0 1 N Y N Y Y N -66.772 -41.327 25.925 -2.178 2.089 0.355 HN2 FH7 14 FH7 HA HA H 0 1 N N N Y N N -65.278 -40.901 27.833 -1.819 -0.647 1.391 HA FH7 15 FH7 HB1C HB1C H 0 0 N N N N N N -63.228 -41.214 26.686 -1.036 -1.105 -0.952 HB1C FH7 16 FH7 HB2C HB2C H 0 0 N N N N N N -64.121 -42.281 25.449 -1.106 0.643 -1.280 HB2C FH7 17 FH7 HG1C HG1C H 0 0 N N N N N N -65.147 -40.468 24.445 0.513 1.053 0.553 HG1C FH7 18 FH7 HG2C HG2C H 0 0 N N N N N N -64.873 -39.382 25.836 0.583 -0.696 0.881 HG2C FH7 19 FH7 HD1C HD1C H 0 0 N N N N N N -62.509 -39.293 25.423 1.418 -1.094 -1.419 HD1C FH7 20 FH7 HD2C HD2C H 0 0 N N N N N N -62.669 -40.640 24.162 1.348 0.654 -1.748 HD2C FH7 21 FH7 HZ HZ H 0 1 N N N N N N -62.357 -37.411 24.752 2.803 -1.833 0.533 HZ FH7 22 FH7 HXT HX0 H 0 1 N Y N Y N Y -64.931 -43.812 29.692 -4.664 -1.648 -0.544 HX0 FH7 23 FH7 H11 H11 H 0 1 N N N N N N -64.599 -39.135 22.503 4.422 1.275 -0.170 H11 FH7 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FH7 N CA SING N N 1 FH7 CA CB SING N N 2 FH7 CA C SING N N 3 FH7 CB CG SING N N 4 FH7 CG CD SING N N 5 FH7 CD NE SING N N 6 FH7 NE OZ SING N N 7 FH7 NE CZ SING N N 8 FH7 CZ OH DOUB N N 9 FH7 C O DOUB N N 10 FH7 C OXT SING N N 11 FH7 N H SING N N 12 FH7 N H2 SING N N 13 FH7 CA HA SING N N 14 FH7 CB HB1C SING N N 15 FH7 CB HB2C SING N N 16 FH7 CG HG1C SING N N 17 FH7 CG HG2C SING N N 18 FH7 CD HD1C SING N N 19 FH7 CD HD2C SING N N 20 FH7 CZ HZ SING N N 21 FH7 OXT HXT SING N N 22 FH7 OZ H11 SING N N 23 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FH7 SMILES ACDLabs 10.04 "O=C(O)C(N)CCCN(O)C=O" FH7 SMILES_CANONICAL CACTVS 3.352 "N[C@H](CCCN(O)C=O)C(O)=O" FH7 SMILES CACTVS 3.352 "N[CH](CCCN(O)C=O)C(O)=O" FH7 SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "C(C[C@H](C(=O)O)N)CN(C=O)O" FH7 SMILES "OpenEye OEToolkits" 1.6.1 "C(CC(C(=O)O)N)CN(C=O)O" FH7 InChI InChI 1.03 "InChI=1S/C6H12N2O4/c7-5(6(10)11)2-1-3-8(12)4-9/h4-5,12H,1-3,7H2,(H,10,11)/t5-/m1/s1" FH7 InChIKey InChI 1.03 KORLZEIJSHHTDW-RXMQYKEDSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FH7 "SYSTEMATIC NAME" ACDLabs 10.04 N~5~-formyl-N~5~-hydroxy-D-ornithine FH7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2R)-2-amino-5-(hydroxy-methanoyl-amino)pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FH7 "Create component" 2008-12-20 EBI FH7 "Modify descriptor" 2011-06-04 RCSB FH7 "Modify parent residue" 2014-01-20 EBI FH7 "Modify one letter code" 2014-01-20 EBI FH7 "Modify backbone" 2023-11-03 PDBE FH7 "Modify PCM" 2024-09-27 PDBE # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 FH7 ? Ornithine "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 2 FH7 ? Hydroxylation "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 3 FH7 ? Formylation "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? #