data_FI6 # _chem_comp.id FI6 _chem_comp.name "N-[(1R)-1-[3-(4-ethoxyphenyl)-4-oxidanylidene-pyrido[2,3-d]pyrimidin-2-yl]ethyl]-N-(pyridin-3-ylmethyl)-2-[4-(trifluoromethyloxy)phenyl]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H28 F3 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(+/-)-AMG 487 " _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-20 _chem_comp.pdbx_modified_date 2023-11-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 603.591 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FI6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8K2W _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FI6 C1 C1 C 0 1 N N N N N N 111.991 106.987 132.905 4.348 -3.932 -0.112 C1 FI6 1 FI6 C2 C2 C 0 1 N N N N N N 112.275 107.912 134.047 2.963 -3.461 -0.558 C2 FI6 2 FI6 C3 C3 C 0 1 Y N N N N N 111.222 109.795 135.110 1.071 -2.300 0.297 C3 FI6 3 FI6 C4 C4 C 0 1 Y N N N N N 112.314 109.897 135.956 0.397 -2.663 -0.860 C4 FI6 4 FI6 C5 C5 C 0 1 Y N N N N N 112.359 110.902 136.905 -0.897 -2.229 -1.069 C5 FI6 5 FI6 C6 C6 C 0 1 Y N N N N N 111.286 111.761 137.061 -1.523 -1.429 -0.122 C6 FI6 6 FI6 C7 C7 C 0 1 Y N N N N N 110.224 111.695 136.177 -0.847 -1.067 1.036 C7 FI6 7 FI6 O1 O1 O 0 1 N N N N N N 111.170 108.817 134.153 2.348 -2.723 0.500 O1 FI6 8 FI6 O2 O2 O 0 1 N N N N N N 113.272 113.606 137.034 -3.642 -2.357 1.248 O2 FI6 9 FI6 O3 O3 O 0 1 N N N N N N 106.294 111.981 137.208 0.706 0.234 -1.523 O3 FI6 10 FI6 O4 O4 O 0 1 N N N N N N 104.702 107.179 133.862 6.452 0.880 -0.672 O4 FI6 11 FI6 C10 C8 C 0 1 Y N N N N N 112.531 114.758 138.954 -5.202 -1.008 0.133 C10 FI6 12 FI6 C11 C9 C 0 1 Y N N N N N 111.523 114.782 139.958 -5.367 -0.018 -0.862 C11 FI6 13 FI6 C12 C10 C 0 1 Y N N N N N 112.481 116.622 140.942 -7.641 0.032 -0.475 C12 FI6 14 FI6 C13 C11 C 0 1 Y N N N N N 113.520 116.680 139.996 -7.551 -0.937 0.513 C13 FI6 15 FI6 C14 C12 C 0 1 Y N N N N N 113.541 115.750 139.007 -6.316 -1.474 0.832 C14 FI6 16 FI6 C15 C13 C 0 1 N N N N N N 110.443 112.946 139.075 -3.085 -0.041 -1.277 C15 FI6 17 FI6 C16 C14 C 0 1 N N R N N N 109.288 111.969 139.215 -1.923 0.504 -2.065 C16 FI6 18 FI6 C17 C15 C 0 1 N N N N N N 109.045 111.652 140.684 -2.446 1.260 -3.289 C17 FI6 19 FI6 C18 C16 C 0 1 N N N N N N 107.546 113.786 138.847 -1.808 2.547 -0.564 C18 FI6 20 FI6 C19 C17 C 0 1 Y N N N N N 108.095 114.826 137.912 -2.154 2.169 0.854 C19 FI6 21 FI6 C20 C18 C 0 1 Y N N N N N 108.309 114.548 136.581 -3.339 1.517 1.135 C20 FI6 22 FI6 C21 C19 C 0 1 Y N N N N N 109.091 116.652 136.159 -2.843 1.446 3.383 C21 FI6 23 FI6 C22 C20 C 0 1 Y N N N N N 108.915 117.022 137.462 -1.643 2.101 3.179 C22 FI6 24 FI6 C23 C21 C 0 1 Y N N N N N 108.412 116.097 138.345 -1.284 2.467 1.892 C23 FI6 25 FI6 C24 C22 C 0 1 N N N N N N 107.289 111.576 137.810 0.175 1.219 -1.053 C24 FI6 26 FI6 C25 C23 C 0 1 N N N N N N 107.678 110.114 137.789 0.995 2.220 -0.280 C25 FI6 27 FI6 C26 C24 C 0 1 Y N N N N N 106.884 109.340 136.763 2.455 1.862 -0.385 C26 FI6 28 FI6 C27 C25 C 0 1 Y N N N N N 105.588 108.919 137.023 3.193 2.285 -1.475 C27 FI6 29 FI6 C28 C26 C 0 1 Y N N N N N 104.855 108.212 136.084 4.532 1.958 -1.573 C28 FI6 30 FI6 C29 C27 C 0 1 Y N N N N N 105.421 107.901 134.856 5.135 1.204 -0.577 C29 FI6 31 FI6 C30 C28 C 0 1 Y N N N N N 106.715 108.311 134.580 4.392 0.780 0.515 C30 FI6 32 FI6 C31 C29 C 0 1 Y N N N N N 107.430 109.019 135.530 3.056 1.115 0.612 C31 FI6 33 FI6 C32 C30 C 0 1 N N N N N N 103.443 106.816 134.097 7.003 0.089 0.383 C32 FI6 34 FI6 C8 C31 C 0 1 Y N N N N N 110.180 110.700 135.218 0.447 -1.502 1.244 C8 FI6 35 FI6 C9 C32 C 0 1 N N N N N N 112.475 113.705 137.952 -3.848 -1.508 0.400 C9 FI6 36 FI6 F1 F1 F 0 1 N N N N N N 103.331 106.005 135.131 8.354 -0.161 0.121 F1 FI6 37 FI6 F2 F2 F 0 1 N N N N N N 102.950 106.173 133.058 6.883 0.778 1.594 F2 FI6 38 FI6 F3 F3 F 0 1 N N N N N N 102.650 107.848 134.312 6.311 -1.124 0.466 F3 FI6 39 FI6 N1 N1 N 0 1 N N N N N N 111.363 112.843 138.029 -2.836 -0.988 -0.335 N1 FI6 40 FI6 N2 N2 N 0 1 Y N N N N N 111.514 115.724 140.945 -6.579 0.460 -1.124 N2 FI6 41 FI6 N3 N3 N 0 1 N N N N N N 110.517 113.865 139.984 -4.272 0.423 -1.529 N3 FI6 42 FI6 N4 N4 N 0 1 N N N N N N 108.030 112.422 138.571 -1.147 1.418 -1.222 N4 FI6 43 FI6 N5 N5 N 0 1 Y N N N N N 108.798 115.433 135.698 -3.646 1.179 2.372 N5 FI6 44 FI6 H1 H1 H 0 1 N N N N N N 112.822 106.275 132.794 4.259 -4.498 0.815 H1 FI6 45 FI6 H2 H2 H 0 1 N N N N N N 111.060 106.436 133.103 4.782 -4.568 -0.885 H2 FI6 46 FI6 H3 H3 H 0 1 N N N N N N 111.882 107.571 131.979 4.991 -3.067 0.050 H3 FI6 47 FI6 H4 H4 H 0 1 N N N N N N 112.380 107.337 134.979 3.061 -2.823 -1.436 H4 FI6 48 FI6 H5 H5 H 0 1 N N N N N N 113.202 108.472 133.855 2.346 -4.326 -0.804 H5 FI6 49 FI6 H6 H6 H 0 1 N N N N N N 113.129 109.193 135.875 0.884 -3.284 -1.597 H6 FI6 50 FI6 H7 H7 H 0 1 N N N N N N 113.235 111.017 137.526 -1.422 -2.510 -1.970 H7 FI6 51 FI6 H8 H8 H 0 1 N N N N N N 109.428 112.422 136.236 -1.334 -0.446 1.773 H8 FI6 52 FI6 H9 H9 H 0 1 N N N N N N 112.474 117.367 141.724 -8.609 0.446 -0.719 H9 FI6 53 FI6 H10 H10 H 0 1 N N N N N N 114.281 117.444 140.055 -8.439 -1.270 1.030 H10 FI6 54 FI6 H11 H11 H 0 1 N N N N N N 114.324 115.766 138.264 -6.218 -2.230 1.597 H11 FI6 55 FI6 H12 H12 H 0 1 N N N N N N 109.593 111.032 138.727 -1.287 -0.318 -2.391 H12 FI6 56 FI6 H13 H13 H 0 1 N N N N N N 109.985 111.318 141.148 -3.092 0.604 -3.872 H13 FI6 57 FI6 H14 H14 H 0 1 N N N N N N 108.683 112.554 141.199 -3.013 2.132 -2.962 H14 FI6 58 FI6 H15 H15 H 0 1 N N N N N N 108.292 110.855 140.767 -1.606 1.582 -3.903 H15 FI6 59 FI6 H16 H16 H 0 1 N N N N N N 107.835 114.055 139.874 -2.720 2.800 -1.105 H16 FI6 60 FI6 H17 H17 H 0 1 N N N N N N 106.449 113.788 138.763 -1.138 3.407 -0.558 H17 FI6 61 FI6 H18 H18 H 0 1 N N N N N N 108.069 113.557 136.225 -4.022 1.281 0.332 H18 FI6 62 FI6 H19 H19 H 0 1 N N N N N N 109.487 117.381 135.467 -3.130 1.157 4.384 H19 FI6 63 FI6 H20 H20 H 0 1 N N N N N N 109.166 118.020 137.791 -0.993 2.324 4.013 H20 FI6 64 FI6 H21 H21 H 0 1 N N N N N N 108.264 116.366 139.381 -0.349 2.973 1.701 H21 FI6 65 FI6 H22 H22 H 0 1 N N N N N N 107.493 109.681 138.783 0.835 3.216 -0.693 H22 FI6 66 FI6 H23 H23 H 0 1 N N N N N N 108.748 110.033 137.547 0.692 2.207 0.766 H23 FI6 67 FI6 H24 H24 H 0 1 N N N N N N 105.140 109.148 137.979 2.723 2.872 -2.250 H24 FI6 68 FI6 H25 H25 H 0 1 N N N N N N 103.844 107.903 136.307 5.108 2.289 -2.425 H25 FI6 69 FI6 H26 H26 H 0 1 N N N N N N 107.165 108.079 133.626 4.860 0.193 1.292 H26 FI6 70 FI6 H27 H27 H 0 1 N N N N N N 108.440 109.330 135.305 2.477 0.786 1.462 H27 FI6 71 FI6 H28 H28 H 0 1 N N N N N N 109.332 110.629 134.553 0.972 -1.220 2.145 H28 FI6 72 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FI6 C1 C2 SING N N 1 FI6 F2 C32 SING N N 2 FI6 O4 C32 SING N N 3 FI6 O4 C29 SING N N 4 FI6 C2 O1 SING N N 5 FI6 C32 F3 SING N N 6 FI6 C32 F1 SING N N 7 FI6 O1 C3 SING N N 8 FI6 C30 C29 DOUB Y N 9 FI6 C30 C31 SING Y N 10 FI6 C29 C28 SING Y N 11 FI6 C3 C8 DOUB Y N 12 FI6 C3 C4 SING Y N 13 FI6 C8 C7 SING Y N 14 FI6 C31 C26 DOUB Y N 15 FI6 N5 C21 DOUB Y N 16 FI6 N5 C20 SING Y N 17 FI6 C4 C5 DOUB Y N 18 FI6 C28 C27 DOUB Y N 19 FI6 C21 C22 SING Y N 20 FI6 C7 C6 DOUB Y N 21 FI6 C20 C19 DOUB Y N 22 FI6 C26 C27 SING Y N 23 FI6 C26 C25 SING N N 24 FI6 C5 C6 SING Y N 25 FI6 O2 C9 DOUB N N 26 FI6 C6 N1 SING N N 27 FI6 O3 C24 DOUB N N 28 FI6 C22 C23 DOUB Y N 29 FI6 C25 C24 SING N N 30 FI6 C24 N4 SING N N 31 FI6 C19 C23 SING Y N 32 FI6 C19 C18 SING N N 33 FI6 C9 N1 SING N N 34 FI6 C9 C10 SING N N 35 FI6 N1 C15 SING N N 36 FI6 N4 C18 SING N N 37 FI6 N4 C16 SING N N 38 FI6 C10 C14 DOUB Y N 39 FI6 C10 C11 SING Y N 40 FI6 C14 C13 SING Y N 41 FI6 C15 C16 SING N N 42 FI6 C15 N3 DOUB N N 43 FI6 C16 C17 SING N N 44 FI6 C11 N3 SING N N 45 FI6 C11 N2 DOUB Y N 46 FI6 C13 C12 DOUB Y N 47 FI6 C12 N2 SING Y N 48 FI6 C1 H1 SING N N 49 FI6 C1 H2 SING N N 50 FI6 C1 H3 SING N N 51 FI6 C2 H4 SING N N 52 FI6 C2 H5 SING N N 53 FI6 C4 H6 SING N N 54 FI6 C5 H7 SING N N 55 FI6 C7 H8 SING N N 56 FI6 C12 H9 SING N N 57 FI6 C13 H10 SING N N 58 FI6 C14 H11 SING N N 59 FI6 C16 H12 SING N N 60 FI6 C17 H13 SING N N 61 FI6 C17 H14 SING N N 62 FI6 C17 H15 SING N N 63 FI6 C18 H16 SING N N 64 FI6 C18 H17 SING N N 65 FI6 C20 H18 SING N N 66 FI6 C21 H19 SING N N 67 FI6 C22 H20 SING N N 68 FI6 C23 H21 SING N N 69 FI6 C25 H22 SING N N 70 FI6 C25 H23 SING N N 71 FI6 C27 H24 SING N N 72 FI6 C28 H25 SING N N 73 FI6 C30 H26 SING N N 74 FI6 C31 H27 SING N N 75 FI6 C8 H28 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FI6 InChI InChI 1.06 "InChI=1S/C32H28F3N5O4/c1-3-43-25-14-10-24(11-15-25)40-30(38-29-27(31(40)42)7-5-17-37-29)21(2)39(20-23-6-4-16-36-19-23)28(41)18-22-8-12-26(13-9-22)44-32(33,34)35/h4-17,19,21H,3,18,20H2,1-2H3/t21-/m1/s1" FI6 InChIKey InChI 1.06 WQTKNBPCJKRYPA-OAQYLSRUSA-N FI6 SMILES_CANONICAL CACTVS 3.385 "CCOc1ccc(cc1)N2C(=O)c3cccnc3N=C2[C@@H](C)N(Cc4cccnc4)C(=O)Cc5ccc(OC(F)(F)F)cc5" FI6 SMILES CACTVS 3.385 "CCOc1ccc(cc1)N2C(=O)c3cccnc3N=C2[CH](C)N(Cc4cccnc4)C(=O)Cc5ccc(OC(F)(F)F)cc5" FI6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCOc1ccc(cc1)N2C(=O)c3cccnc3N=C2[C@@H](C)N(Cc4cccnc4)C(=O)Cc5ccc(cc5)OC(F)(F)F" FI6 SMILES "OpenEye OEToolkits" 2.0.7 "CCOc1ccc(cc1)N2C(=O)c3cccnc3N=C2C(C)N(Cc4cccnc4)C(=O)Cc5ccc(cc5)OC(F)(F)F" # _pdbx_chem_comp_identifier.comp_id FI6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(1~{R})-1-[3-(4-ethoxyphenyl)-4-oxidanylidene-pyrido[2,3-d]pyrimidin-2-yl]ethyl]-~{N}-(pyridin-3-ylmethyl)-2-[4-(trifluoromethyloxy)phenyl]ethanamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id FI6 _pdbx_chem_comp_synonyms.name "(+/-)-AMG 487 " _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FI6 "Create component" 2023-07-20 PDBC FI6 "Initial release" 2023-11-29 RCSB #