data_FM1 # _chem_comp.id FM1 _chem_comp.name "2-HYDROXYMETHYL-5-(7-METHYLAMINO-3H-PYRAZOLO[4,3-D]PYRIMIDIN-3-YL)-TETRAHYDRO-FURAN-3,4-DIOL" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H15 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "N7-METHYL-FORMYCIN A" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2001-11-12 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 281.268 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FM1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1K9S _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FM1 N1 N1 N 0 1 Y N N 113.931 93.584 33.883 -0.475 -1.113 3.952 N1 FM1 1 FM1 C2 C2 C 0 1 Y N N 115.035 94.221 34.493 -0.969 -1.844 2.967 C2 FM1 2 FM1 N3 N3 N 0 1 Y N N 115.257 95.562 34.353 -0.848 -1.504 1.705 N3 FM1 3 FM1 C4 C4 C 0 1 Y N N 114.307 96.204 33.573 -0.206 -0.380 1.361 C4 FM1 4 FM1 C5 C5 C 0 1 Y N N 113.177 95.652 32.926 0.330 0.430 2.378 C5 FM1 5 FM1 C6 C6 C 0 1 Y N N 112.930 94.246 33.066 0.177 0.018 3.709 C6 FM1 6 FM1 N6 N6 N 0 1 N N N 111.970 93.599 32.551 0.690 0.775 4.747 N6 FM1 7 FM1 N7 N7 N 0 1 Y N N 112.475 96.632 32.232 0.923 1.497 1.760 N7 FM1 8 FM1 N8 N8 N 0 1 Y N N 113.173 97.720 32.460 0.753 1.346 0.377 N8 FM1 9 FM1 C9 C9 C 0 1 Y N N 114.294 97.549 33.266 0.089 0.251 0.134 C9 FM1 10 FM1 "C1'" "C1'" C 0 1 N N S 115.147 98.793 33.577 -0.292 -0.259 -1.230 "C1'" FM1 11 FM1 "C2'" "C2'" C 0 1 N N R 116.343 98.590 34.535 -1.152 0.786 -1.975 "C2'" FM1 12 FM1 "O2'" "O2'" O 0 1 N N N 116.152 99.458 35.627 -2.541 0.470 -1.868 "O2'" FM1 13 FM1 "C3'" "C3'" C 0 1 N N S 117.630 98.897 33.727 -0.682 0.677 -3.445 "C3'" FM1 14 FM1 "O3'" "O3'" O 0 1 N N N 118.307 100.108 34.113 -1.767 0.287 -4.289 "O3'" FM1 15 FM1 "C4'" "C4'" C 0 1 N N R 117.193 98.909 32.299 0.400 -0.423 -3.412 "C4'" FM1 16 FM1 "O4'" "O4'" O 0 1 N N N 115.735 99.195 32.325 0.883 -0.426 -2.051 "O4'" FM1 17 FM1 "C5'" "C5'" C 0 1 N N N 117.514 97.550 31.634 1.536 -0.085 -4.380 "C5'" FM1 18 FM1 "O5'" "O5'" O 0 1 N N N 117.163 97.579 30.278 2.558 -1.078 -4.280 "O5'" FM1 19 FM1 C66 C66 C 0 1 N N N 111.920 92.188 32.811 0.515 0.333 6.133 C66 FM1 20 FM1 H2 H2 H 0 1 N N N 115.753 93.648 35.104 -1.493 -2.757 3.211 H2 FM1 21 FM1 HN61 1HN6 H 0 0 N N N 111.953 93.760 31.544 1.165 1.599 4.558 HN61 FM1 22 FM1 H7 H7 H 0 1 N N N 111.625 96.566 31.672 1.380 2.230 2.201 H7 FM1 23 FM1 "H1'" "H1'" H 0 1 N N N 114.458 99.517 34.072 -0.832 -1.202 -1.144 "H1'" FM1 24 FM1 "H2'" "H2'" H 0 1 N N N 116.430 97.553 34.936 -0.957 1.785 -1.585 "H2'" FM1 25 FM1 "HO2'" "'HO2" H 0 0 N N N 116.887 99.333 36.216 -3.018 1.120 -2.401 "HO2'" FM1 26 FM1 "H3'" "H3'" H 0 1 N N N 118.407 98.122 33.926 -0.257 1.621 -3.782 "H3'" FM1 27 FM1 "HO3'" "'HO3" H 0 0 N N N 119.096 100.296 33.618 -1.403 0.175 -5.178 "HO3'" FM1 28 FM1 "H4'" "H4'" H 0 1 N N N 117.727 99.680 31.695 -0.034 -1.391 -3.663 "H4'" FM1 29 FM1 "H5'1" "1H5'" H 0 0 N N N 117.032 96.700 32.171 1.150 -0.061 -5.399 "H5'1" FM1 30 FM1 "H5'2" "2H5'" H 0 0 N N N 118.579 97.255 31.782 1.951 0.890 -4.126 "H5'2" FM1 31 FM1 "HO5'" "'HO5" H 0 0 N N N 117.360 96.744 29.870 3.253 -0.827 -4.904 "HO5'" FM1 32 FM1 H661 1H66 H 0 0 N N N 111.939 92.012 33.912 0.982 1.052 6.806 H661 FM1 33 FM1 H662 2H66 H 0 0 N N N 111.075 91.619 32.358 -0.548 0.260 6.360 H662 FM1 34 FM1 H663 3H66 H 0 0 N N N 112.887 91.720 32.511 0.981 -0.643 6.264 H663 FM1 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FM1 N1 C2 DOUB Y N 1 FM1 N1 C6 SING Y N 2 FM1 C2 N3 SING Y N 3 FM1 C2 H2 SING N N 4 FM1 N3 C4 DOUB Y N 5 FM1 C4 C5 SING Y N 6 FM1 C4 C9 SING Y N 7 FM1 C5 C6 DOUB Y N 8 FM1 C5 N7 SING Y N 9 FM1 C6 N6 SING N N 10 FM1 N6 C66 SING N N 11 FM1 N6 HN61 SING N N 12 FM1 N7 N8 SING Y N 13 FM1 N7 H7 SING N N 14 FM1 N8 C9 DOUB Y N 15 FM1 C9 "C1'" SING N N 16 FM1 "C1'" "C2'" SING N N 17 FM1 "C1'" "O4'" SING N N 18 FM1 "C1'" "H1'" SING N N 19 FM1 "C2'" "O2'" SING N N 20 FM1 "C2'" "C3'" SING N N 21 FM1 "C2'" "H2'" SING N N 22 FM1 "O2'" "HO2'" SING N N 23 FM1 "C3'" "O3'" SING N N 24 FM1 "C3'" "C4'" SING N N 25 FM1 "C3'" "H3'" SING N N 26 FM1 "O3'" "HO3'" SING N N 27 FM1 "C4'" "O4'" SING N N 28 FM1 "C4'" "C5'" SING N N 29 FM1 "C4'" "H4'" SING N N 30 FM1 "C5'" "O5'" SING N N 31 FM1 "C5'" "H5'1" SING N N 32 FM1 "C5'" "H5'2" SING N N 33 FM1 "O5'" "HO5'" SING N N 34 FM1 C66 H661 SING N N 35 FM1 C66 H662 SING N N 36 FM1 C66 H663 SING N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FM1 SMILES ACDLabs 10.04 "OC1C(OC(CO)C1O)c3nnc2c3ncnc2NC" FM1 SMILES_CANONICAL CACTVS 3.341 "CNc1ncnc2c1[nH]nc2[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O" FM1 SMILES CACTVS 3.341 "CNc1ncnc2c1[nH]nc2[CH]3O[CH](CO)[CH](O)[CH]3O" FM1 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CNc1c2c(c(n[nH]2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)ncn1" FM1 SMILES "OpenEye OEToolkits" 1.5.0 "CNc1c2c(c(n[nH]2)C3C(C(C(O3)CO)O)O)ncn1" FM1 InChI InChI 1.03 "InChI=1S/C11H15N5O4/c1-12-11-7-5(13-3-14-11)6(15-16-7)10-9(19)8(18)4(2-17)20-10/h3-4,8-10,17-19H,2H2,1H3,(H,15,16)(H,12,13,14)/t4-,8-,9-,10+/m1/s1" FM1 InChIKey InChI 1.03 JRRNRCMIBCSOIH-LFAOKBQASA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FM1 "SYSTEMATIC NAME" ACDLabs 10.04 "(1S)-1,4-anhydro-1-[7-(methylamino)-1H-pyrazolo[4,3-d]pyrimidin-3-yl]-D-ribitol" FM1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3S,4R,5S)-2-(hydroxymethyl)-5-(7-methylamino-1H-pyrazolo[4,5-d]pyrimidin-3-yl)oxolane-3,4-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FM1 "Create component" 2001-11-12 RCSB FM1 "Modify descriptor" 2011-06-04 RCSB FM1 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id FM1 _pdbx_chem_comp_synonyms.name "N7-METHYL-FORMYCIN A" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##