data_FNU # _chem_comp.id FNU _chem_comp.name ;6-amino-5-fluorouridine 5'-(dihydrogen phosphate) ; _chem_comp.type "DNA linking" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C9 H13 F N3 O9 P" _chem_comp.mon_nstd_parent_comp_id U _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-05-24 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 357.186 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FNU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3N2M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FNU P P P 0 1 N N N -6.754 30.993 -26.000 4.514 0.983 0.233 P FNU 1 FNU N1 N1 N 0 1 N N N -7.833 24.912 -23.254 -1.988 -0.047 0.105 N1 FNU 2 FNU C2 C2 C 0 1 N N N -6.883 25.548 -22.571 -1.768 0.931 -0.793 C2 FNU 3 FNU N2 N2 N 0 1 N N N -6.023 24.949 -21.706 -2.710 1.854 -1.057 N2 FNU 4 FNU O2 O2 O 0 1 N N N -6.784 26.857 -22.769 -0.701 0.982 -1.374 O2 FNU 5 FNU N3 N3 N 0 1 N N N -8.863 22.876 -23.755 -3.411 -1.120 1.688 N3 FNU 6 FNU C4 C4 C 0 1 N N N -6.186 23.626 -21.523 -3.900 1.820 -0.425 C4 FNU 7 FNU O4 O4 O 0 1 N N N -5.369 23.000 -20.674 -4.749 2.660 -0.670 O4 FNU 8 FNU C5 C5 C 0 1 N N N -7.128 22.884 -22.221 -4.156 0.810 0.516 C5 FNU 9 FNU C6 C6 C 0 1 N N N -7.938 23.582 -23.074 -3.188 -0.121 0.772 C6 FNU 10 FNU "C1'" C1* C 0 1 N N R -8.694 25.628 -24.216 -0.946 -1.042 0.368 C1* FNU 11 FNU O1P O1P O 0 1 N N N -5.660 30.908 -27.044 5.578 0.074 -0.248 O1P FNU 12 FNU "C2'" C2* C 0 1 N N R -9.393 26.862 -23.627 -0.728 -1.945 -0.873 C2* FNU 13 FNU "O2'" O2* O 0 1 N N N -10.581 26.577 -22.879 -1.640 -3.045 -0.871 O2* FNU 14 FNU F24 F24 F 0 1 N N N -7.161 21.394 -22.221 -5.343 0.759 1.161 F24 FNU 15 FNU O2P O2P O 0 1 N N N -6.208 30.997 -24.583 5.020 1.750 1.555 O2P FNU 16 FNU "C3'" C3* C 0 1 N N S -9.627 27.676 -24.900 0.727 -2.433 -0.667 C3* FNU 17 FNU "O3'" O3* O 0 1 N N N -10.718 27.115 -25.628 0.738 -3.734 -0.076 O3* FNU 18 FNU O3P O3P O 0 1 N Y N -7.763 32.092 -26.319 4.170 2.061 -0.913 O3P FNU 19 FNU "C4'" C4* C 0 1 N N R -8.328 27.446 -25.680 1.341 -1.396 0.292 C4* FNU 20 FNU "O4'" O4* O 0 1 N N N -7.934 26.129 -25.343 0.335 -0.402 0.548 O4* FNU 21 FNU "C5'" C5* C 0 1 N N N -7.257 28.454 -25.305 2.563 -0.744 -0.359 C5* FNU 22 FNU "O5'" O5* O 0 1 N N N -7.582 29.615 -26.041 3.194 0.129 0.580 O5* FNU 23 FNU HN2 HN2 H 0 1 N N N -5.308 25.463 -21.232 -2.532 2.551 -1.708 HN2 FNU 24 FNU HN3 HN3 H 0 1 N N N -8.800 21.911 -23.500 -2.697 -1.733 1.921 HN3 FNU 25 FNU "H1'" H1* H 0 1 N N N -9.437 24.872 -24.509 -1.203 -1.644 1.239 H1* FNU 26 FNU "H2'" H2* H 0 1 N N N -8.807 27.384 -22.856 -0.818 -1.368 -1.794 H2* FNU 27 FNU "HO2'" HO2* H 0 0 N N N -10.951 27.388 -22.550 -1.542 -3.638 -1.628 HO2* FNU 28 FNU HO2P HO2P H 0 0 N N N -5.260 30.944 -24.608 5.814 2.285 1.420 HO2P FNU 29 FNU "H3'" H3* H 0 1 N N N -9.859 28.735 -24.716 1.265 -2.442 -1.615 H3* FNU 30 FNU "HO3'" HO3* H 0 0 N Y N -10.864 27.620 -26.419 0.312 -4.415 -0.614 HO3* FNU 31 FNU HO3P HO3P H 0 0 N Y N -7.514 32.526 -27.126 3.479 2.691 -0.666 HO3P FNU 32 FNU "H4'" H4* H 0 1 N N N -8.477 27.573 -26.763 1.630 -1.880 1.226 H4* FNU 33 FNU "H5'" H5* H 0 1 N N N -7.265 28.656 -24.224 3.267 -1.518 -0.665 H5* FNU 34 FNU "H5'A" H5*A H 0 0 N N N -6.256 28.085 -25.571 2.248 -0.173 -1.232 H5*A FNU 35 FNU H14 H14 H 0 1 N N N -9.775 23.221 -23.533 -4.284 -1.212 2.101 H14 FNU 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FNU P O2P SING N N 1 FNU N1 C6 SING N N 2 FNU N1 C2 SING N N 3 FNU C2 N2 SING N N 4 FNU N2 C4 SING N N 5 FNU N2 HN2 SING N N 6 FNU O2 C2 DOUB N N 7 FNU N3 C6 SING N N 8 FNU N3 HN3 SING N N 9 FNU N3 H14 SING N N 10 FNU C4 O4 DOUB N N 11 FNU C5 C4 SING N N 12 FNU C5 F24 SING N N 13 FNU C6 C5 DOUB N N 14 FNU "C1'" N1 SING N N 15 FNU "C1'" "C2'" SING N N 16 FNU "C1'" "H1'" SING N N 17 FNU O1P P DOUB N N 18 FNU "C2'" "O2'" SING N N 19 FNU "C2'" "H2'" SING N N 20 FNU "O2'" "HO2'" SING N N 21 FNU O2P HO2P SING N N 22 FNU "C3'" "C2'" SING N N 23 FNU "C3'" "H3'" SING N N 24 FNU "O3'" "C3'" SING N N 25 FNU "O3'" "HO3'" SING N N 26 FNU O3P P SING N N 27 FNU O3P HO3P SING N N 28 FNU "C4'" "C3'" SING N N 29 FNU "C4'" "O4'" SING N N 30 FNU "C4'" "C5'" SING N N 31 FNU "C4'" "H4'" SING N N 32 FNU "O4'" "C1'" SING N N 33 FNU "C5'" "H5'" SING N N 34 FNU "C5'" "H5'A" SING N N 35 FNU "O5'" P SING N N 36 FNU "O5'" "C5'" SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FNU SMILES ACDLabs 12.01 "O=P(O)(O)OCC2OC(N1C(=O)NC(=O)C(F)=C1N)C(O)C2O" FNU SMILES_CANONICAL CACTVS 3.370 "NC1=C(F)C(=O)NC(=O)N1[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O" FNU SMILES CACTVS 3.370 "NC1=C(F)C(=O)NC(=O)N1[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O" FNU SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C([C@@H]1[C@H]([C@H]([C@@H](O1)N2C(=C(C(=O)NC2=O)F)N)O)O)OP(=O)(O)O" FNU SMILES "OpenEye OEToolkits" 1.7.0 "C(C1C(C(C(O1)N2C(=C(C(=O)NC2=O)F)N)O)O)OP(=O)(O)O" FNU InChI InChI 1.03 "InChI=1S/C9H13FN3O9P/c10-3-6(11)13(9(17)12-7(3)16)8-5(15)4(14)2(22-8)1-21-23(18,19)20/h2,4-5,8,14-15H,1,11H2,(H,12,16,17)(H2,18,19,20)/t2-,4-,5-,8-/m1/s1" FNU InChIKey InChI 1.03 OLBMCLUPWOAIRA-UMMCILCDSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FNU "SYSTEMATIC NAME" ACDLabs 12.01 ;6-amino-5-fluorouridine 5'-(dihydrogen phosphate) ; FNU "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "[(2R,3S,4R,5R)-5-(6-azanyl-5-fluoro-2,4-dioxo-pyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FNU "Create component" 2010-05-24 RCSB FNU "Modify descriptor" 2011-06-04 RCSB #