data_FSI
# 
_chem_comp.id                                    FSI 
_chem_comp.name                                  "5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid" 
_chem_comp.type                                  "D-saccharide, beta linking" 
_chem_comp.pdbx_type                             ATOMS 
_chem_comp.formula                               "C11 H18 F N O9" 
_chem_comp.mon_nstd_parent_comp_id               SLB 
_chem_comp.pdbx_synonyms                         
;5-(acetylamino)-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid; 3-FLUOROSIALIC ACID;
5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulosonic acid;
5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-L-manno-non-2-ulosonic acid;
5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-manno-non-2-ulosonic acid
;
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2004-01-19 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        327.260 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     FSI 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2AH2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 FSI "5-(acetylamino)-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid" PDB ? 
2 FSI "3-FLUOROSIALIC ACID"                                                                    PDB ? 
3 FSI "5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulosonic acid"           PDB ? 
4 FSI "5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-L-manno-non-2-ulosonic acid"                 PDB ? 
5 FSI "5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-manno-non-2-ulosonic acid"                   PDB ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
FSI O2   O2   O 0 1 N Y N N N N -8.461  14.077 5.887  0.293  -2.008 -1.837 O2   FSI 1  
FSI C1   C1   C 0 1 N N N N N N -9.128  15.150 3.866  0.111  -3.315 0.165  C1   FSI 2  
FSI F1   F1   F 0 1 N N N N N N -10.577 16.946 5.363  1.922  -1.508 1.376  F1   FSI 3  
FSI C2   C2   C 0 1 N N R N N N -8.914  15.318 5.356  0.394  -1.952 -0.413 C2   FSI 4  
FSI C3   C3   C 0 1 N N R N N N -10.110 15.899 6.050  1.806  -1.513 -0.018 C3   FSI 5  
FSI C4   C4   C 0 1 N N R N N N -9.727  16.435 7.425  2.063  -0.103 -0.558 C4   FSI 6  
FSI O4   O4   O 0 1 N N N N N N -10.838 17.001 8.026  3.352  0.345  -0.132 O4   FSI 7  
FSI C5   C5   C 0 1 N N R N N N -8.663  17.564 7.321  0.988  0.844  -0.017 C5   FSI 8  
FSI N5   N5   N 0 1 N N N N N N -8.398  18.150 8.531  1.180  2.180  -0.586 N5   FSI 9  
FSI C6   C6   C 0 1 N N R N N N -7.485  16.760 6.739  -0.393 0.313  -0.412 C6   FSI 10 
FSI O6   O6   O 0 1 N N N N N N -7.815  16.213 5.445  -0.556 -1.013 0.095  O6   FSI 11 
FSI C7   C7   C 0 1 N N R N N N -6.175  17.533 6.585  -1.475 1.221  0.176  C7   FSI 12 
FSI O7   O7   O 0 1 N N N N N N -6.206  18.345 5.433  -1.290 1.330  1.589  O7   FSI 13 
FSI C8   C8   C 0 1 N N R N N N -4.965  16.572 6.576  -2.854 0.623  -0.112 C8   FSI 14 
FSI O8   O8   O 0 1 N N N N N N -4.828  16.000 7.861  -3.040 0.514  -1.525 O8   FSI 15 
FSI C9   C9   C 0 1 N N N N N N -3.661  17.265 6.193  -3.937 1.531  0.476  C9   FSI 16 
FSI O9   O9   O 0 1 N N N N N N -3.380  18.245 7.184  -5.216 0.916  0.309  O9   FSI 17 
FSI C10  C10  C 0 1 N N N N N N -8.419  19.479 8.768  2.043  3.040  -0.009 C10  FSI 18 
FSI O10  O10  O 0 1 N N N N N N -8.544  20.331 7.867  2.660  2.708  0.981  O10  FSI 19 
FSI C11  C11  C 0 1 N N N N N N -8.249  19.977 10.191 2.240  4.415  -0.594 C11  FSI 20 
FSI O1A  O1A  O 0 1 N N N N N N -8.124  15.151 3.102  -0.861 -3.486 0.861  O1A  FSI 21 
FSI O1B  O1B  O 0 1 N N N N N N -10.281 14.987 3.429  0.940  -4.338 -0.093 O1B  FSI 22 
FSI HO2  HO2  H 0 1 N Y N N N N -8.321  14.164 6.823  -0.577 -2.280 -2.159 HO2  FSI 23 
FSI H32  H3   H 0 1 N N N N N N -10.875 15.118 6.171  2.534  -2.204 -0.441 H32  FSI 24 
FSI H4   H4   H 0 1 N N N N N N -9.318  15.615 8.033  2.024  -0.116 -1.647 H4   FSI 25 
FSI HO4  HO4  H 0 1 N Y N N N N -10.599 17.335 8.883  4.082  -0.213 -0.434 HO4  FSI 26 
FSI H5   H5   H 0 1 N N N N N N -8.998  18.303 6.578  1.062  0.896  1.070  H5   FSI 27 
FSI HN5  HN5  H 0 1 N N N N N N -8.172  17.548 9.297  0.686  2.446  -1.377 HN5  FSI 28 
FSI H6   H6   H 0 1 N N N N N N -7.292  15.925 7.428  -0.480 0.300  -1.498 H6   FSI 29 
FSI H7   H7   H 0 1 N N N N N N -6.070  18.177 7.470  -1.406 2.210  -0.277 H7   FSI 30 
FSI HO7  HO7  H 0 1 N Y N N N N -5.385  18.816 5.355  -1.339 0.486  2.059  HO7  FSI 31 
FSI H8   H8   H 0 1 N N N N N N -5.164  15.782 5.837  -2.924 -0.366 0.341  H8   FSI 32 
FSI HO8  HO8  H 0 1 N Y N N N N -4.086  15.407 7.867  -2.991 1.358  -1.994 HO8  FSI 33 
FSI H92  H9   H 0 1 N N N N N N -2.844  16.529 6.153  -3.744 1.686  1.537  H92  FSI 34 
FSI H91  H9A  H 0 1 N N N N N N -3.769  17.747 5.210  -3.925 2.491  -0.040 H91  FSI 35 
FSI HO9  HO9  H 0 1 N Y N N N N -2.570  18.692 6.967  -5.951 1.437  0.660  HO9  FSI 36 
FSI H111 H11  H 0 0 N N N N N N -8.264  21.077 10.199 1.606  4.530  -1.473 H111 FSI 37 
FSI H113 H11A H 0 0 N N N N N N -9.071  19.594 10.814 1.973  5.167  0.148  H113 FSI 38 
FSI H112 H11B H 0 0 N N N N N N -7.289  19.621 10.592 3.284  4.541  -0.880 H112 FSI 39 
FSI HO1B HO1B H 0 0 N N N N N N -10.250 14.874 2.486  0.718  -5.194 0.300  HO1B FSI 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
FSI C2  O2   SING N N 1  
FSI O2  HO2  SING N N 2  
FSI O1A C1   DOUB N N 3  
FSI O1B C1   SING N N 4  
FSI C1  C2   SING N N 5  
FSI F1  C3   SING N N 6  
FSI C2  O6   SING N N 7  
FSI C2  C3   SING N N 8  
FSI C3  C4   SING N N 9  
FSI C3  H32  SING N N 10 
FSI C5  C4   SING N N 11 
FSI C4  O4   SING N N 12 
FSI C4  H4   SING N N 13 
FSI O4  HO4  SING N N 14 
FSI C6  C5   SING N N 15 
FSI C5  N5   SING N N 16 
FSI C5  H5   SING N N 17 
FSI N5  C10  SING N N 18 
FSI N5  HN5  SING N N 19 
FSI O6  C6   SING N N 20 
FSI C7  C6   SING N N 21 
FSI C6  H6   SING N N 22 
FSI O7  C7   SING N N 23 
FSI C8  C7   SING N N 24 
FSI C7  H7   SING N N 25 
FSI O7  HO7  SING N N 26 
FSI C9  C8   SING N N 27 
FSI C8  O8   SING N N 28 
FSI C8  H8   SING N N 29 
FSI O8  HO8  SING N N 30 
FSI C9  O9   SING N N 31 
FSI C9  H92  SING N N 32 
FSI C9  H91  SING N N 33 
FSI O9  HO9  SING N N 34 
FSI O10 C10  DOUB N N 35 
FSI C10 C11  SING N N 36 
FSI C11 H111 SING N N 37 
FSI C11 H113 SING N N 38 
FSI C11 H112 SING N N 39 
FSI O1B HO1B SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
FSI SMILES           ACDLabs              12.01 "O=C(O)C1(O)OC(C(NC(=O)C)C(O)C1F)C(O)C(O)CO"                                                                                                                
FSI InChI            InChI                1.03  "InChI=1S/C11H18FNO9/c1-3(15)13-5-7(18)9(12)11(21,10(19)20)22-8(5)6(17)4(16)2-14/h4-9,14,16-18,21H,2H2,1H3,(H,13,15)(H,19,20)/t4-,5-,6-,7-,8-,9-,11+/m1/s1" 
FSI InChIKey         InChI                1.03  ALJLGESFXXDPKH-RISWTRDCSA-N                                                                                                                                 
FSI SMILES_CANONICAL CACTVS               3.370 "CC(=O)N[C@@H]1[C@@H](O)[C@@H](F)[C@](O)(O[C@H]1[C@H](O)[C@H](O)CO)C(O)=O"                                                                                  
FSI SMILES           CACTVS               3.370 "CC(=O)N[CH]1[CH](O)[CH](F)[C](O)(O[CH]1[CH](O)[CH](O)CO)C(O)=O"                                                                                            
FSI SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(=O)N[C@@H]1[C@H]([C@H]([C@](O[C@H]1[C@@H]([C@@H](CO)O)O)(C(=O)O)O)F)O"                                                                                  
FSI SMILES           "OpenEye OEToolkits" 1.7.6 "CC(=O)NC1C(C(C(OC1C(C(CO)O)O)(C(=O)O)O)F)O"                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
FSI "SYSTEMATIC NAME"           ACDLabs              12.01 "5-(acetylamino)-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid"                                   
FSI "SYSTEMATIC NAME"           "OpenEye OEToolkits" 1.7.6 
;(2R,3R,4R,5R,6R)-5-acetamido-3-fluoranyl-2,4-bis(oxidanyl)-6-[(1R,2R)-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic
acid
;
FSI "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE             1.0   b-D-Neup5Ac3fluoro                                                                                                         
# 
_pdbx_chem_comp_related.comp_id             FSI 
_pdbx_chem_comp_related.related_comp_id     SLB 
_pdbx_chem_comp_related.relationship_type   "Carbohydrate core" 
_pdbx_chem_comp_related.details             ? 
# 
loop_
_pdbx_chem_comp_atom_related.ordinal 
_pdbx_chem_comp_atom_related.comp_id 
_pdbx_chem_comp_atom_related.atom_id 
_pdbx_chem_comp_atom_related.related_comp_id 
_pdbx_chem_comp_atom_related.related_atom_id 
_pdbx_chem_comp_atom_related.related_type 
1  FSI C1   SLB C1   "Carbohydrate core" 
2  FSI C10  SLB C10  "Carbohydrate core" 
3  FSI C11  SLB C11  "Carbohydrate core" 
4  FSI C2   SLB C2   "Carbohydrate core" 
5  FSI C3   SLB C3   "Carbohydrate core" 
6  FSI C4   SLB C4   "Carbohydrate core" 
7  FSI C5   SLB C5   "Carbohydrate core" 
8  FSI C6   SLB C6   "Carbohydrate core" 
9  FSI C7   SLB C7   "Carbohydrate core" 
10 FSI C8   SLB C8   "Carbohydrate core" 
11 FSI C9   SLB C9   "Carbohydrate core" 
12 FSI N5   SLB N5   "Carbohydrate core" 
13 FSI O10  SLB O10  "Carbohydrate core" 
14 FSI O1A  SLB O1A  "Carbohydrate core" 
15 FSI O1B  SLB O1B  "Carbohydrate core" 
16 FSI O2   SLB O2   "Carbohydrate core" 
17 FSI O4   SLB O4   "Carbohydrate core" 
18 FSI O6   SLB O6   "Carbohydrate core" 
19 FSI O7   SLB O7   "Carbohydrate core" 
20 FSI O8   SLB O8   "Carbohydrate core" 
21 FSI O9   SLB O9   "Carbohydrate core" 
22 FSI H111 SLB H111 "Carbohydrate core" 
23 FSI H113 SLB H113 "Carbohydrate core" 
24 FSI H112 SLB H112 "Carbohydrate core" 
25 FSI H32  SLB H32  "Carbohydrate core" 
26 FSI H4   SLB H4   "Carbohydrate core" 
27 FSI H5   SLB H5   "Carbohydrate core" 
28 FSI H6   SLB H6   "Carbohydrate core" 
29 FSI H7   SLB H7   "Carbohydrate core" 
30 FSI H8   SLB H8   "Carbohydrate core" 
31 FSI H92  SLB H92  "Carbohydrate core" 
32 FSI H91  SLB H91  "Carbohydrate core" 
33 FSI HN5  SLB HN5  "Carbohydrate core" 
34 FSI HO1B SLB HO1B "Carbohydrate core" 
35 FSI HO2  SLB HO2  "Carbohydrate core" 
36 FSI HO4  SLB HO4  "Carbohydrate core" 
37 FSI HO7  SLB HO7  "Carbohydrate core" 
38 FSI HO8  SLB HO8  "Carbohydrate core" 
39 FSI HO9  SLB HO9  "Carbohydrate core" 
# 
loop_
_pdbx_chem_comp_feature.comp_id 
_pdbx_chem_comp_feature.type 
_pdbx_chem_comp_feature.value 
_pdbx_chem_comp_feature.source 
_pdbx_chem_comp_feature.support 
FSI "CARBOHYDRATE ISOMER"                 D        PDB ? 
FSI "CARBOHYDRATE RING"                   pyranose PDB ? 
FSI "CARBOHYDRATE ANOMER"                 beta     PDB ? 
FSI "CARBOHYDRATE PRIMARY CARBONYL GROUP" ketose   PDB ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
FSI "Create component"         2004-01-19 RCSB 
FSI "Modify descriptor"        2011-06-04 RCSB 
FSI "Other modification"       2013-01-08 RCSB 
FSI "Other modification"       2020-07-03 RCSB 
FSI "Modify parent residue"    2020-07-17 RCSB 
FSI "Modify name"              2020-07-17 RCSB 
FSI "Modify synonyms"          2020-07-17 RCSB 
FSI "Modify linking type"      2020-07-17 RCSB 
FSI "Modify atom id"           2020-07-17 RCSB 
FSI "Modify component atom id" 2020-07-17 RCSB 
FSI "Modify leaving atom flag" 2020-07-17 RCSB 
FSI "Modify PCM"               2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            FSI 
_pdbx_chem_comp_pcm.modified_residue_id                TYR 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Carbohydrate 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C2 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OH 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
#