data_FV4 # _chem_comp.id FV4 _chem_comp.name "6-chloro-1-[(4-fluoro-3,5-dimethylphenyl)methyl]-2-(piperazin-1-yl)-1H-benzimidazole" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H22 Cl F N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-04-20 _chem_comp.pdbx_modified_date 2018-09-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 372.867 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FV4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6D5J _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FV4 N1 N1 N 0 1 Y N N 36.386 28.729 23.623 -0.300 2.428 -0.922 N1 FV4 1 FV4 N3 N2 N 0 1 N N N 36.736 26.656 19.030 4.254 3.375 0.219 N3 FV4 2 FV4 C4 C1 C 0 1 N N N 33.044 28.905 22.052 0.206 -0.107 1.590 C4 FV4 3 FV4 C5 C2 C 0 1 Y N N 35.529 28.549 22.595 0.468 1.738 -0.115 C5 FV4 4 FV4 C6 C3 C 0 1 Y N N 35.578 29.254 24.664 -1.589 2.020 -0.785 C6 FV4 5 FV4 C7 C4 C 0 1 Y N N 35.931 29.618 25.970 -2.787 2.408 -1.389 C7 FV4 6 FV4 C8 C5 C 0 1 Y N N 34.931 30.088 26.795 -3.965 1.790 -1.031 C8 FV4 7 FV4 C10 C6 C 0 1 Y N N 33.214 29.860 25.059 -2.795 0.391 0.532 C10 FV4 8 FV4 C13 C7 C 0 1 N N N 36.495 28.120 19.038 3.910 2.678 -1.028 C13 FV4 9 FV4 C15 C8 C 0 1 N N N 36.034 26.544 21.337 2.178 2.590 1.251 C15 FV4 10 FV4 C17 C9 C 0 1 Y N N 31.657 31.314 19.518 2.252 -2.734 -0.188 C17 FV4 11 FV4 N N3 N 0 1 Y N N 34.211 28.937 22.903 -0.285 0.844 0.590 N FV4 12 FV4 C C10 C 0 1 N N N 33.871 33.878 21.274 -0.974 -4.695 -0.023 C FV4 13 FV4 C1 C11 C 0 1 Y N N 33.217 32.569 20.927 0.036 -3.588 0.139 C1 FV4 14 FV4 C11 C12 C 0 1 Y N N 34.232 29.382 24.228 -1.600 1.002 0.182 C11 FV4 15 FV4 C12 C13 C 0 1 N N N 36.722 28.646 20.465 2.387 2.598 -1.160 C12 FV4 16 FV4 C14 C14 C 0 1 N N N 35.844 25.919 19.949 3.700 2.670 1.384 C14 FV4 17 FV4 C16 C15 C 0 1 Y N N 31.934 30.160 20.238 1.889 -1.556 0.435 C16 FV4 18 FV4 C18 C16 C 0 1 N N N 30.656 31.332 18.413 3.658 -2.914 -0.699 C18 FV4 19 FV4 C19 C17 C 0 1 Y N N 32.313 32.502 19.867 1.326 -3.753 -0.336 C19 FV4 20 FV4 C2 C18 C 0 1 Y N N 33.486 31.400 21.643 -0.325 -2.409 0.763 C2 FV4 21 FV4 C3 C19 C 0 1 Y N N 32.837 30.201 21.292 0.601 -1.393 0.910 C3 FV4 22 FV4 C9 C20 C 0 1 Y N N 33.614 30.188 26.321 -3.971 0.785 -0.075 C9 FV4 23 FV4 F F1 F 0 1 N N N 32.058 33.581 19.132 1.680 -4.905 -0.946 F FV4 24 FV4 N2 N4 N 0 1 N N N 35.746 27.983 21.311 1.833 1.893 0.004 N2 FV4 25 FV4 CL CL1 CL 0 0 N N N 32.391 30.742 27.434 -5.466 0.019 0.364 CL FV4 26 FV4 H1 H1 H 0 1 N N N 36.590 26.314 18.102 5.253 3.488 0.307 H1 FV4 27 FV4 H3 H3 H 0 1 N N N 32.158 28.718 22.677 1.072 0.316 2.099 H3 FV4 28 FV4 H4 H4 H 0 1 N N N 33.160 28.086 21.326 -0.581 -0.308 2.318 H4 FV4 29 FV4 H5 H5 H 0 1 N N N 36.950 29.534 26.318 -2.790 3.190 -2.134 H5 FV4 30 FV4 H6 H6 H 0 1 N N N 35.162 30.380 27.809 -4.891 2.091 -1.499 H6 FV4 31 FV4 H7 H7 H 0 1 N N N 32.191 29.962 24.727 -2.805 -0.392 1.275 H7 FV4 32 FV4 H8 H8 H 0 1 N N N 37.192 28.614 18.345 4.320 3.226 -1.876 H8 FV4 33 FV4 H9 H9 H 0 1 N N N 35.460 28.327 18.727 4.327 1.671 -1.008 H9 FV4 34 FV4 H10 H10 H 0 1 N N N 35.353 26.054 22.048 1.767 2.042 2.099 H10 FV4 35 FV4 H11 H11 H 0 1 N N N 37.074 26.391 21.661 1.760 3.597 1.232 H11 FV4 36 FV4 H12 H12 H 0 1 N N N 33.252 34.415 22.008 -1.502 -4.570 -0.968 H12 FV4 37 FV4 H13 H13 H 0 1 N N N 34.866 33.688 21.703 -0.462 -5.657 -0.017 H13 FV4 38 FV4 H14 H14 H 0 1 N N N 33.974 34.489 20.365 -1.688 -4.658 0.800 H14 FV4 39 FV4 H15 H15 H 0 1 N N N 37.741 28.405 20.801 1.973 3.605 -1.207 H15 FV4 40 FV4 H16 H16 H 0 1 N N N 36.574 29.736 20.496 2.130 2.055 -2.070 H16 FV4 41 FV4 H17 H17 H 0 1 N N N 34.797 26.022 19.626 4.115 1.663 1.430 H17 FV4 42 FV4 H18 H18 H 0 1 N N N 36.118 24.854 19.971 3.958 3.212 2.293 H18 FV4 43 FV4 H19 H19 H 0 1 N N N 31.448 29.231 19.979 2.611 -0.761 0.551 H19 FV4 44 FV4 H20 H20 H 0 1 N N N 31.157 31.108 17.460 3.716 -2.569 -1.732 H20 FV4 45 FV4 H21 H21 H 0 1 N N N 29.882 30.575 18.607 4.346 -2.335 -0.083 H21 FV4 46 FV4 H22 H22 H 0 1 N N N 30.190 32.327 18.357 3.930 -3.969 -0.653 H22 FV4 47 FV4 H23 H23 H 0 1 N N N 34.189 31.416 22.463 -1.331 -2.280 1.134 H23 FV4 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FV4 C18 C17 SING N N 1 FV4 N3 C13 SING N N 2 FV4 N3 C14 SING N N 3 FV4 C13 C12 SING N N 4 FV4 F C19 SING N N 5 FV4 C17 C19 DOUB Y N 6 FV4 C17 C16 SING Y N 7 FV4 C19 C1 SING Y N 8 FV4 C14 C15 SING N N 9 FV4 C16 C3 DOUB Y N 10 FV4 C12 N2 SING N N 11 FV4 C1 C SING N N 12 FV4 C1 C2 DOUB Y N 13 FV4 C3 C2 SING Y N 14 FV4 C3 C4 SING N N 15 FV4 N2 C15 SING N N 16 FV4 N2 C5 SING N N 17 FV4 C4 N SING N N 18 FV4 C5 N SING Y N 19 FV4 C5 N1 DOUB Y N 20 FV4 N C11 SING Y N 21 FV4 N1 C6 SING Y N 22 FV4 C11 C6 DOUB Y N 23 FV4 C11 C10 SING Y N 24 FV4 C6 C7 SING Y N 25 FV4 C10 C9 DOUB Y N 26 FV4 C7 C8 DOUB Y N 27 FV4 C9 C8 SING Y N 28 FV4 C9 CL SING N N 29 FV4 N3 H1 SING N N 30 FV4 C4 H3 SING N N 31 FV4 C4 H4 SING N N 32 FV4 C7 H5 SING N N 33 FV4 C8 H6 SING N N 34 FV4 C10 H7 SING N N 35 FV4 C13 H8 SING N N 36 FV4 C13 H9 SING N N 37 FV4 C15 H10 SING N N 38 FV4 C15 H11 SING N N 39 FV4 C H12 SING N N 40 FV4 C H13 SING N N 41 FV4 C H14 SING N N 42 FV4 C12 H15 SING N N 43 FV4 C12 H16 SING N N 44 FV4 C14 H17 SING N N 45 FV4 C14 H18 SING N N 46 FV4 C16 H19 SING N N 47 FV4 C18 H20 SING N N 48 FV4 C18 H21 SING N N 49 FV4 C18 H22 SING N N 50 FV4 C2 H23 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FV4 SMILES ACDLabs 12.01 "n3c1ccc(cc1n(Cc2cc(c(c(C)c2)F)C)c3N4CCNCC4)Cl" FV4 InChI InChI 1.03 "InChI=1S/C20H22ClFN4/c1-13-9-15(10-14(2)19(13)22)12-26-18-11-16(21)3-4-17(18)24-20(26)25-7-5-23-6-8-25/h3-4,9-11,23H,5-8,12H2,1-2H3" FV4 InChIKey InChI 1.03 HQRYJQRNCCMWFK-UHFFFAOYSA-N FV4 SMILES_CANONICAL CACTVS 3.385 "Cc1cc(Cn2c3cc(Cl)ccc3nc2N4CCNCC4)cc(C)c1F" FV4 SMILES CACTVS 3.385 "Cc1cc(Cn2c3cc(Cl)ccc3nc2N4CCNCC4)cc(C)c1F" FV4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc(cc(c1F)C)Cn2c3cc(ccc3nc2N4CCNCC4)Cl" FV4 SMILES "OpenEye OEToolkits" 2.0.6 "Cc1cc(cc(c1F)C)Cn2c3cc(ccc3nc2N4CCNCC4)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FV4 "SYSTEMATIC NAME" ACDLabs 12.01 "6-chloro-1-[(4-fluoro-3,5-dimethylphenyl)methyl]-2-(piperazin-1-yl)-1H-benzimidazole" FV4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "6-chloranyl-1-[(4-fluoranyl-3,5-dimethyl-phenyl)methyl]-2-piperazin-1-yl-benzimidazole" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FV4 "Create component" 2018-04-20 RCSB FV4 "Initial release" 2018-09-19 RCSB #