data_FV5 # _chem_comp.id FV5 _chem_comp.name "(1R,2S)-1-hydroxy-2-{[N-({[7-(methanesulfonyl)-7-azaspiro[3.5]nonan-2-yl]oxy}carbonyl)-L-leucyl]amino}-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H40 N4 O10 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-12-15 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 596.715 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FV5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7T40 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FV5 C12 C1 C 0 1 N N N N N N -20.622 -2.192 6.441 6.013 -1.260 0.818 C12 FV5 1 FV5 C14 C2 C 0 1 N N N N N N -20.413 -4.412 7.622 4.253 -2.707 -0.211 C14 FV5 2 FV5 C16 C3 C 0 1 N N N N N N -22.763 -4.892 7.823 6.071 -3.845 -1.104 C16 FV5 3 FV5 C19 C4 C 0 1 N N R N N N -20.834 0.136 5.390 5.747 1.141 1.459 C19 FV5 4 FV5 C23 C5 C 0 1 N N N N N N -22.062 -7.542 1.818 -3.219 -0.424 0.670 C23 FV5 5 FV5 C24 C6 C 0 1 N N N N N N -22.977 -8.618 1.190 -4.183 -0.917 1.764 C24 FV5 6 FV5 C26 C7 C 0 1 N N N N N N -22.022 -9.489 -0.992 -6.386 0.388 1.753 C26 FV5 7 FV5 C27 C8 C 0 1 N N N N N N -22.990 -10.590 -1.237 -7.339 1.135 0.813 C27 FV5 8 FV5 C31 C9 C 0 1 N N N N N N -23.522 -13.240 -2.749 -9.919 1.207 -1.671 C31 FV5 9 FV5 C02 C10 C 0 1 N N N N N N -21.518 -5.263 1.916 -0.892 0.034 0.407 C02 FV5 10 FV5 C04 C11 C 0 1 N N S N N N -21.023 -2.912 1.715 1.495 0.336 0.022 C04 FV5 11 FV5 C05 C12 C 0 1 N N N N N N -21.134 -1.827 0.625 1.609 1.468 -1.001 C05 FV5 12 FV5 C06 C13 C 0 1 N N N N N N -20.499 -2.259 -0.696 2.700 1.129 -2.018 C06 FV5 13 FV5 C07 C14 C 0 1 N N N N N N -20.836 -1.294 -1.853 2.267 -0.085 -2.844 C07 FV5 14 FV5 C08 C15 C 0 1 N N N N N N -18.972 -2.421 -0.554 2.921 2.325 -2.947 C08 FV5 15 FV5 C09 C16 C 0 1 N N N N N N -21.606 -2.431 3.060 2.707 0.345 0.918 C09 FV5 16 FV5 C11 C17 C 0 1 N N S N N N -21.242 -1.340 5.281 5.038 -0.211 1.359 C11 FV5 17 FV5 C13 C18 C 0 1 N N S N N N -21.126 -3.630 6.491 5.343 -2.635 0.836 C13 FV5 18 FV5 C17 C19 C 0 1 N N N N N N -22.632 -3.736 6.833 6.348 -3.731 0.412 C17 FV5 19 FV5 C25 C20 C 0 1 N N N N N N -21.761 -9.259 0.460 -5.316 -0.317 0.922 C25 FV5 20 FV5 C33 C21 C 0 1 N N N N N N -22.059 -11.777 0.696 -6.855 -0.534 -1.027 C33 FV5 21 FV5 C34 C22 C 0 1 N N N N N N -21.208 -10.546 1.001 -5.899 -1.292 -0.099 C34 FV5 22 FV5 C35 C23 C 0 1 N N N N N N -20.949 -8.051 0.865 -4.275 0.641 0.327 C35 FV5 23 FV5 N03 N1 N 0 1 N N N N N N -21.692 -4.080 1.262 0.289 0.527 0.831 N03 FV5 24 FV5 N10 N2 N 0 1 N N N N N N -20.797 -1.828 3.998 3.893 -0.096 0.453 N10 FV5 25 FV5 N15 N3 N 0 1 N N N N N N -21.403 -5.099 8.342 4.684 -3.398 -1.280 N15 FV5 26 FV5 N28 N4 N 0 1 N N N N N N -22.622 -11.891 -0.641 -7.829 0.199 -0.206 N28 FV5 27 FV5 O01 O1 O 0 1 N N N N N N -20.662 -5.471 2.753 -0.973 -0.494 -0.685 O01 FV5 28 FV5 O18 O2 O 0 1 N N N N N N -19.255 -4.459 7.874 3.150 -2.216 -0.099 O18 FV5 29 FV5 O20 O3 O 0 1 N N N N N N -21.552 0.852 4.399 4.874 2.092 2.071 O20 FV5 30 FV5 O21 O4 O 0 1 N N N N N N -22.800 -2.595 3.297 2.616 0.750 2.057 O21 FV5 31 FV5 O22 O5 O 0 1 N N N N N N -22.416 -6.228 1.549 -1.981 0.128 1.192 O22 FV5 32 FV5 O30 O6 O 0 1 N N N N N N -22.539 -14.352 -0.728 -10.027 0.291 0.832 O30 FV5 33 FV5 O32 O7 O 0 1 N N N N N N -24.680 -13.228 -0.526 -9.554 -1.340 -0.966 O32 FV5 34 FV5 S29 S1 S 0 1 N N N N N N -23.374 -13.268 -1.103 -9.454 -0.029 -0.428 S29 FV5 35 FV5 H1 H1 H 0 1 N N N N N N -19.530 -2.212 6.310 6.291 -1.004 -0.204 H1 FV5 36 FV5 H2 H2 H 0 1 N N N N N N -20.867 -1.706 7.397 6.905 -1.282 1.443 H2 FV5 37 FV5 H3 H3 H 0 1 N N N N N N -23.453 -4.628 8.638 6.748 -3.203 -1.666 H3 FV5 38 FV5 H4 H4 H 0 1 N N N N N N -23.126 -5.798 7.315 6.177 -4.880 -1.426 H4 FV5 39 FV5 H5 H5 H 0 1 N N N N N N -20.615 0.565 6.379 6.649 1.035 2.061 H5 FV5 40 FV5 H7 H7 H 0 1 N N N N N N -21.834 -7.754 2.873 -3.056 -1.150 -0.126 H7 FV5 41 FV5 H8 H8 H 0 1 N N N N N N -23.741 -8.212 0.511 -4.229 -2.003 1.849 H8 FV5 42 FV5 H9 H9 H 0 1 N N N N N N -23.455 -9.281 1.926 -4.042 -0.423 2.725 H9 FV5 43 FV5 H10 H10 H 0 1 N N N N N N -21.071 -9.741 -1.484 -5.912 1.098 2.431 H10 FV5 44 FV5 H11 H11 H 0 1 N N N N N N -22.426 -8.563 -1.427 -6.944 -0.350 2.329 H11 FV5 45 FV5 H12 H12 H 0 1 N N N N N N -23.963 -10.288 -0.822 -8.182 1.527 1.384 H12 FV5 46 FV5 H13 H13 H 0 1 N N N N N N -23.082 -10.727 -2.325 -6.808 1.956 0.331 H13 FV5 47 FV5 H14 H14 H 0 1 N N N N N N -24.169 -12.401 -3.045 -9.695 2.205 -1.293 H14 FV5 48 FV5 H15 H15 H 0 1 N N N N N N -22.528 -13.115 -3.204 -9.355 1.031 -2.587 H15 FV5 49 FV5 H16 H16 H 0 1 N N N N N N -23.967 -14.185 -3.093 -10.986 1.129 -1.880 H16 FV5 50 FV5 H17 H17 H 0 1 N N N N N N -19.956 -3.133 1.867 1.436 -0.620 -0.499 H17 FV5 51 FV5 H18 H18 H 0 1 N N N N N N -20.627 -0.917 0.979 0.656 1.589 -1.516 H18 FV5 52 FV5 H19 H19 H 0 1 N N N N N N -22.198 -1.609 0.451 1.865 2.396 -0.489 H19 FV5 53 FV5 H20 H20 H 0 1 N N N N N N -20.912 -3.244 -0.958 3.627 0.900 -1.494 H20 FV5 54 FV5 H21 H21 H 0 1 N N N N N N -21.928 -1.191 -1.939 3.056 -0.342 -3.552 H21 FV5 55 FV5 H22 H22 H 0 1 N N N N N N -20.390 -0.309 -1.651 2.086 -0.930 -2.180 H22 FV5 56 FV5 H23 H23 H 0 1 N N N N N N -20.430 -1.694 -2.794 1.354 0.153 -3.388 H23 FV5 57 FV5 H24 H24 H 0 1 N N N N N N -18.751 -3.111 0.274 3.229 3.189 -2.359 H24 FV5 58 FV5 H25 H25 H 0 1 N N N N N N -18.558 -2.826 -1.489 3.698 2.083 -3.672 H25 FV5 59 FV5 H26 H26 H 0 1 N N N N N N -18.517 -1.441 -0.346 1.993 2.554 -3.471 H26 FV5 60 FV5 H27 H27 H 0 1 N N N N N N -22.338 -1.409 5.349 4.691 -0.513 2.347 H27 FV5 61 FV5 H28 H28 H 0 1 N N N N N N -20.934 -4.125 5.527 4.937 -2.849 1.824 H28 FV5 62 FV5 H29 H29 H 0 1 N N N N N N -22.986 -2.800 7.290 6.135 -4.673 0.919 H29 FV5 63 FV5 H30 H30 H 0 1 N N N N N N -23.216 -3.944 5.924 7.374 -3.413 0.598 H30 FV5 64 FV5 H31 H31 H 0 1 N N N N N N -22.897 -11.782 1.408 -6.290 0.169 -1.639 H31 FV5 65 FV5 H32 H32 H 0 1 N N N N N N -21.429 -12.663 0.865 -7.377 -1.242 -1.671 H32 FV5 66 FV5 H33 H33 H 0 1 N N N N N N -20.210 -10.701 0.565 -5.092 -1.730 -0.686 H33 FV5 67 FV5 H34 H34 H 0 1 N N N N N N -21.121 -10.450 2.093 -6.443 -2.081 0.420 H34 FV5 68 FV5 H35 H35 H 0 1 N N N N N N -20.011 -8.304 1.380 -4.161 1.567 0.891 H35 FV5 69 FV5 H36 H36 H 0 1 N N N N N N -20.736 -7.365 0.032 -4.395 0.807 -0.743 H36 FV5 70 FV5 H37 H37 H 0 1 N N N N N N -22.291 -4.034 0.463 0.340 1.009 1.671 H37 FV5 71 FV5 H38 H38 H 0 1 N N N N N N -19.829 -1.720 3.773 3.987 -0.338 -0.482 H38 FV5 72 FV5 H39 H39 H 0 1 N N N N N N -21.202 -5.675 9.134 4.148 -3.577 -2.069 H39 FV5 73 FV5 H40 H40 H 0 1 N N N N N N -21.320 1.772 4.442 4.049 2.238 1.588 H40 FV5 74 FV5 S1 S2 S 0 1 N Y N N N N ? ? ? 6.194 1.713 -0.204 S1 FV5 75 FV5 O1 O8 O 0 1 N N N N N N ? ? ? 7.208 0.888 -0.760 O1 FV5 76 FV5 O2 O9 O 0 1 N N N N N N ? ? ? 5.029 2.044 -0.947 O2 FV5 77 FV5 O3 O10 O 0 1 N N N N N N ? ? ? 6.884 3.050 0.028 O3 FV5 78 FV5 H6 H6 H 0 1 N N N N N N ? ? ? 7.184 3.484 -0.783 H6 FV5 79 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FV5 C31 S29 SING N N 1 FV5 C07 C06 SING N N 2 FV5 C27 C26 SING N N 3 FV5 C27 N28 SING N N 4 FV5 S29 O30 DOUB N N 5 FV5 S29 N28 SING N N 6 FV5 S29 O32 DOUB N N 7 FV5 C26 C25 SING N N 8 FV5 C06 C08 SING N N 9 FV5 C06 C05 SING N N 10 FV5 N28 C33 SING N N 11 FV5 C25 C35 SING N N 12 FV5 C25 C34 SING N N 13 FV5 C25 C24 SING N N 14 FV5 C05 C04 SING N N 15 FV5 C33 C34 SING N N 16 FV5 C35 C23 SING N N 17 FV5 C24 C23 SING N N 18 FV5 N03 C04 SING N N 19 FV5 N03 C02 SING N N 20 FV5 O22 C23 SING N N 21 FV5 O22 C02 SING N N 22 FV5 C04 C09 SING N N 23 FV5 C02 O01 DOUB N N 24 FV5 C09 O21 DOUB N N 25 FV5 C09 N10 SING N N 26 FV5 N10 C11 SING N N 27 FV5 O20 C19 SING N N 28 FV5 C11 C19 SING N N 29 FV5 C11 C12 SING N N 30 FV5 C12 C13 SING N N 31 FV5 C13 C17 SING N N 32 FV5 C13 C14 SING N N 33 FV5 C17 C16 SING N N 34 FV5 C14 O18 DOUB N N 35 FV5 C14 N15 SING N N 36 FV5 C16 N15 SING N N 37 FV5 C12 H1 SING N N 38 FV5 C12 H2 SING N N 39 FV5 C16 H3 SING N N 40 FV5 C16 H4 SING N N 41 FV5 C19 H5 SING N N 42 FV5 C23 H7 SING N N 43 FV5 C24 H8 SING N N 44 FV5 C24 H9 SING N N 45 FV5 C26 H10 SING N N 46 FV5 C26 H11 SING N N 47 FV5 C27 H12 SING N N 48 FV5 C27 H13 SING N N 49 FV5 C31 H14 SING N N 50 FV5 C31 H15 SING N N 51 FV5 C31 H16 SING N N 52 FV5 C04 H17 SING N N 53 FV5 C05 H18 SING N N 54 FV5 C05 H19 SING N N 55 FV5 C06 H20 SING N N 56 FV5 C07 H21 SING N N 57 FV5 C07 H22 SING N N 58 FV5 C07 H23 SING N N 59 FV5 C08 H24 SING N N 60 FV5 C08 H25 SING N N 61 FV5 C08 H26 SING N N 62 FV5 C11 H27 SING N N 63 FV5 C13 H28 SING N N 64 FV5 C17 H29 SING N N 65 FV5 C17 H30 SING N N 66 FV5 C33 H31 SING N N 67 FV5 C33 H32 SING N N 68 FV5 C34 H33 SING N N 69 FV5 C34 H34 SING N N 70 FV5 C35 H35 SING N N 71 FV5 C35 H36 SING N N 72 FV5 N03 H37 SING N N 73 FV5 N10 H38 SING N N 74 FV5 N15 H39 SING N N 75 FV5 O20 H40 SING N N 76 FV5 C19 S1 SING N N 77 FV5 S1 O1 DOUB N N 78 FV5 S1 O2 DOUB N N 79 FV5 S1 O3 SING N N 80 FV5 O3 H6 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FV5 SMILES ACDLabs 12.01 "O=C1NCCC1CC(NC(=O)C(CC(C)C)NC(=O)OC1CC2(CCN(CC2)S(C)(=O)=O)C1)C(O)S(=O)(=O)O" FV5 InChI InChI 1.03 "InChI=1S/C23H40N4O10S2/c1-14(2)10-17(20(29)25-18(21(30)39(34,35)36)11-15-4-7-24-19(15)28)26-22(31)37-16-12-23(13-16)5-8-27(9-6-23)38(3,32)33/h14-18,21,30H,4-13H2,1-3H3,(H,24,28)(H,25,29)(H,26,31)(H,34,35,36)/t15-,17-,18-,21+/m0/s1" FV5 InChIKey InChI 1.03 DXHKTWBJEAVWSD-QUJKESNLSA-N FV5 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OC1CC2(CCN(CC2)[S](C)(=O)=O)C1)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@H](O)[S](O)(=O)=O" FV5 SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OC1CC2(CCN(CC2)[S](C)(=O)=O)C1)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)[S](O)(=O)=O" FV5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@H](O)S(=O)(=O)O)NC(=O)OC2CC3(C2)CCN(CC3)S(=O)(=O)C" FV5 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OC2CC3(C2)CCN(CC3)S(=O)(=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FV5 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S)-1-hydroxy-2-{[N-({[7-(methanesulfonyl)-7-azaspiro[3.5]nonan-2-yl]oxy}carbonyl)-L-leucyl]amino}-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" FV5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S})-2-[[(2~{S})-4-methyl-2-[(7-methylsulfonyl-7-azaspiro[3.5]nonan-2-yl)oxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FV5 "Create component" 2021-12-15 RCSB FV5 "Initial release" 2021-12-22 RCSB FV5 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id FV5 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C19 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #