data_FV7 # _chem_comp.id FV7 _chem_comp.name "6-chloro-4-(2-chlorophenyl)-1-[(4-fluoro-3,5-dimethylphenyl)methyl]-2-(piperazin-1-yl)-1H-benzimidazole" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H25 Cl2 F N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-04-20 _chem_comp.pdbx_modified_date 2018-09-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 483.408 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FV7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6D5H _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FV7 N1 N1 N 0 1 Y N N 36.460 29.479 23.198 1.053 1.154 -0.381 N1 FV7 1 FV7 N3 N2 N 0 1 N N N 36.848 26.774 18.963 -1.360 5.220 -1.151 N3 FV7 2 FV7 C4 C1 C 0 1 N N N 32.986 29.048 22.110 -1.937 -0.218 -1.855 C4 FV7 3 FV7 C5 C2 C 0 1 Y N N 35.538 28.986 22.339 -0.179 1.268 -0.814 C5 FV7 4 FV7 C6 C3 C 0 1 Y N N 35.729 29.983 24.293 1.479 -0.123 -0.550 C6 FV7 5 FV7 C7 C4 C 0 1 Y N N 36.172 30.637 25.457 2.688 -0.784 -0.265 C7 FV7 6 FV7 C8 C5 C 0 1 Y N N 35.205 30.980 26.390 2.817 -2.135 -0.564 C8 FV7 7 FV7 C10 C6 C 0 1 Y N N 33.387 30.101 25.006 0.573 -2.188 -1.420 C10 FV7 8 FV7 C13 C7 C 0 1 Y N N 38.418 30.308 26.456 5.003 0.136 -0.361 C13 FV7 9 FV7 C15 C8 C 0 1 Y N N 40.313 31.627 25.727 5.923 1.344 1.491 C15 FV7 10 FV7 C17 C9 C 0 1 Y N N 38.154 32.002 24.808 3.695 0.476 1.637 C17 FV7 11 FV7 C20 C10 C 0 1 N N N 37.301 28.163 19.141 -1.245 4.645 0.196 C20 FV7 12 FV7 C21 C11 C 0 1 N N N 37.276 28.498 20.637 -0.350 3.405 0.144 C21 FV7 13 FV7 C22 C12 C 0 1 Y N N 33.450 31.507 21.523 -3.617 0.352 -0.090 C22 FV7 14 FV7 C24 C13 C 0 1 N N N 33.930 33.928 21.084 -5.294 1.043 1.635 C24 FV7 15 FV7 F F1 F 0 1 N N N 32.102 33.676 18.982 -5.478 -1.700 2.255 F FV7 16 FV7 C25 C14 C 0 1 Y N N 32.307 32.600 19.729 -4.625 -1.344 1.269 C25 FV7 17 FV7 C1 C15 C 0 1 Y N N 31.612 31.409 19.428 -3.886 -2.311 0.609 C1 FV7 18 FV7 C C16 C 0 1 N N N 30.601 31.445 18.344 -4.032 -3.761 0.991 C FV7 19 FV7 C23 C17 C 0 1 Y N N 33.215 32.661 20.770 -4.490 -0.011 0.918 C23 FV7 20 FV7 C3 C18 C 0 1 Y N N 32.781 30.305 21.242 -2.884 -0.615 -0.752 C3 FV7 21 FV7 C2 C19 C 0 1 Y N N 31.869 30.261 20.182 -3.018 -1.946 -0.402 C2 FV7 22 FV7 N N3 N 0 1 Y N N 34.246 29.166 22.807 -0.616 0.064 -1.288 N FV7 23 FV7 C11 C20 C 0 1 Y N N 34.359 29.759 24.078 0.421 -0.840 -1.131 C11 FV7 24 FV7 C9 C21 C 0 1 Y N N 33.854 30.686 26.147 1.765 -2.828 -1.138 C9 FV7 25 FV7 CL CL1 CL 0 0 N N N 32.667 31.026 27.387 1.943 -4.516 -1.504 CL FV7 26 FV7 C12 C22 C 0 1 Y N N 37.581 30.993 25.579 3.816 -0.044 0.348 C12 FV7 27 FV7 CL1 CL2 CL 0 0 N N N 37.234 32.974 23.722 2.219 0.263 2.526 CL1 FV7 28 FV7 C16 C23 C 0 1 Y N N 39.500 32.330 24.860 4.746 1.174 2.198 C16 FV7 29 FV7 C14 C24 C 0 1 Y N N 39.768 30.628 26.522 6.050 0.826 0.214 C14 FV7 30 FV7 N2 N4 N 0 1 N N N 35.912 28.358 21.136 -0.922 2.430 -0.794 N2 FV7 31 FV7 C19 C25 C 0 1 N N N 35.511 26.501 19.540 -1.932 4.245 -2.090 C19 FV7 32 FV7 C18 C26 C 0 1 N N N 35.525 26.923 21.031 -1.037 3.005 -2.142 C18 FV7 33 FV7 H1 H1 H 0 1 N N N 36.815 26.577 17.983 -1.903 6.070 -1.137 H1 FV7 34 FV7 H3 H3 H 0 1 N N N 32.166 28.964 22.839 -1.857 -1.033 -2.575 H3 FV7 35 FV7 H4 H4 H 0 1 N N N 33.000 28.154 21.469 -2.316 0.673 -2.356 H4 FV7 36 FV7 H5 H5 H 0 1 N N N 35.492 31.475 27.306 3.743 -2.647 -0.348 H5 FV7 37 FV7 H6 H6 H 0 1 N N N 32.336 29.918 24.838 -0.242 -2.738 -1.867 H6 FV7 38 FV7 H7 H7 H 0 1 N N N 38.017 29.527 27.085 5.104 -0.268 -1.358 H7 FV7 39 FV7 H8 H8 H 0 1 N N N 41.367 31.853 25.786 6.745 1.883 1.937 H8 FV7 40 FV7 H9 H9 H 0 1 N N N 38.325 28.271 18.754 -0.807 5.382 0.870 H9 FV7 41 FV7 H10 H10 H 0 1 N N N 36.630 28.844 18.597 -2.234 4.364 0.558 H10 FV7 42 FV7 H11 H11 H 0 1 N N N 37.939 27.808 21.180 0.648 3.690 -0.191 H11 FV7 43 FV7 H12 H12 H 0 1 N N N 37.619 29.532 20.788 -0.286 2.960 1.137 H12 FV7 44 FV7 H13 H13 H 0 1 N N N 34.160 31.541 22.336 -3.512 1.391 -0.365 H13 FV7 45 FV7 H14 H14 H 0 1 N N N 33.344 34.510 21.811 -4.734 1.403 2.498 H14 FV7 46 FV7 H15 H15 H 0 1 N N N 34.917 33.696 21.510 -5.490 1.874 0.957 H15 FV7 47 FV7 H16 H16 H 0 1 N N N 34.058 34.515 20.162 -6.240 0.614 1.967 H16 FV7 48 FV7 H17 H17 H 0 1 N N N 31.079 31.186 17.388 -4.821 -4.217 0.392 H17 FV7 49 FV7 H18 H18 H 0 1 N N N 29.803 30.721 18.563 -3.091 -4.281 0.808 H18 FV7 50 FV7 H19 H19 H 0 1 N N N 30.171 32.455 18.277 -4.288 -3.835 2.047 H19 FV7 51 FV7 H20 H20 H 0 1 N N N 31.362 29.337 19.946 -2.441 -2.700 -0.917 H20 FV7 52 FV7 H21 H21 H 0 1 N N N 39.903 33.116 24.238 4.654 1.577 3.196 H21 FV7 53 FV7 H22 H22 H 0 1 N N N 40.407 30.089 27.206 6.972 0.961 -0.332 H22 FV7 54 FV7 H23 H23 H 0 1 N N N 34.748 27.078 18.998 -2.929 3.959 -1.755 H23 FV7 55 FV7 H24 H24 H 0 1 N N N 35.284 25.428 19.460 -1.995 4.690 -3.083 H24 FV7 56 FV7 H25 H25 H 0 1 N N N 34.523 26.781 21.462 -0.047 3.285 -2.503 H25 FV7 57 FV7 H26 H26 H 0 1 N N N 36.251 26.306 21.580 -1.475 2.268 -2.815 H26 FV7 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FV7 C C1 SING N N 1 FV7 N3 C20 SING N N 2 FV7 N3 C19 SING N N 3 FV7 F C25 SING N N 4 FV7 C20 C21 SING N N 5 FV7 C1 C25 DOUB Y N 6 FV7 C1 C2 SING Y N 7 FV7 C19 C18 SING N N 8 FV7 C25 C23 SING Y N 9 FV7 C2 C3 DOUB Y N 10 FV7 C21 N2 SING N N 11 FV7 C23 C24 SING N N 12 FV7 C23 C22 DOUB Y N 13 FV7 C18 N2 SING N N 14 FV7 N2 C5 SING N N 15 FV7 C3 C22 SING Y N 16 FV7 C3 C4 SING N N 17 FV7 C4 N SING N N 18 FV7 C5 N SING Y N 19 FV7 C5 N1 DOUB Y N 20 FV7 N C11 SING Y N 21 FV7 N1 C6 SING Y N 22 FV7 CL1 C17 SING N N 23 FV7 C11 C6 DOUB Y N 24 FV7 C11 C10 SING Y N 25 FV7 C6 C7 SING Y N 26 FV7 C17 C16 DOUB Y N 27 FV7 C17 C12 SING Y N 28 FV7 C16 C15 SING Y N 29 FV7 C10 C9 DOUB Y N 30 FV7 C7 C12 SING N N 31 FV7 C7 C8 DOUB Y N 32 FV7 C12 C13 DOUB Y N 33 FV7 C15 C14 DOUB Y N 34 FV7 C9 C8 SING Y N 35 FV7 C9 CL SING N N 36 FV7 C13 C14 SING Y N 37 FV7 N3 H1 SING N N 38 FV7 C4 H3 SING N N 39 FV7 C4 H4 SING N N 40 FV7 C8 H5 SING N N 41 FV7 C10 H6 SING N N 42 FV7 C13 H7 SING N N 43 FV7 C15 H8 SING N N 44 FV7 C20 H9 SING N N 45 FV7 C20 H10 SING N N 46 FV7 C21 H11 SING N N 47 FV7 C21 H12 SING N N 48 FV7 C22 H13 SING N N 49 FV7 C24 H14 SING N N 50 FV7 C24 H15 SING N N 51 FV7 C24 H16 SING N N 52 FV7 C H17 SING N N 53 FV7 C H18 SING N N 54 FV7 C H19 SING N N 55 FV7 C2 H20 SING N N 56 FV7 C16 H21 SING N N 57 FV7 C14 H22 SING N N 58 FV7 C19 H23 SING N N 59 FV7 C19 H24 SING N N 60 FV7 C18 H25 SING N N 61 FV7 C18 H26 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FV7 SMILES ACDLabs 12.01 "n4c2c(c1ccccc1Cl)cc(cc2n(Cc3cc(C)c(F)c(c3)C)c4N5CCNCC5)Cl" FV7 InChI InChI 1.03 "InChI=1S/C26H25Cl2FN4/c1-16-11-18(12-17(2)24(16)29)15-33-23-14-19(27)13-21(20-5-3-4-6-22(20)28)25(23)31-26(33)32-9-7-30-8-10-32/h3-6,11-14,30H,7-10,15H2,1-2H3" FV7 InChIKey InChI 1.03 YIYWIIQFTVKZTC-UHFFFAOYSA-N FV7 SMILES_CANONICAL CACTVS 3.385 "Cc1cc(Cn2c3cc(Cl)cc(c4ccccc4Cl)c3nc2N5CCNCC5)cc(C)c1F" FV7 SMILES CACTVS 3.385 "Cc1cc(Cn2c3cc(Cl)cc(c4ccccc4Cl)c3nc2N5CCNCC5)cc(C)c1F" FV7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc(cc(c1F)C)Cn2c3cc(cc(c3nc2N4CCNCC4)c5ccccc5Cl)Cl" FV7 SMILES "OpenEye OEToolkits" 2.0.6 "Cc1cc(cc(c1F)C)Cn2c3cc(cc(c3nc2N4CCNCC4)c5ccccc5Cl)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FV7 "SYSTEMATIC NAME" ACDLabs 12.01 "6-chloro-4-(2-chlorophenyl)-1-[(4-fluoro-3,5-dimethylphenyl)methyl]-2-(piperazin-1-yl)-1H-benzimidazole" FV7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "6-chloranyl-4-(2-chlorophenyl)-1-[(4-fluoranyl-3,5-dimethyl-phenyl)methyl]-2-piperazin-1-yl-benzimidazole" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FV7 "Create component" 2018-04-20 RCSB FV7 "Initial release" 2018-09-19 RCSB #