data_FYJ # _chem_comp.id FYJ _chem_comp.name "phenyl 1-thio-beta-D-glucopyranosiduronic acid" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C12 H14 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "phenyl 1-thio-beta-D-glucosiduronic acid; phenyl 1-thio-D-glucosiduronic acid; phenyl 1-thio-glucosiduronic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-04-25 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 286.301 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FYJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6D7F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 FYJ "phenyl 1-thio-beta-D-glucosiduronic acid" PDB ? 2 FYJ "phenyl 1-thio-D-glucosiduronic acid" PDB ? 3 FYJ "phenyl 1-thio-glucosiduronic acid" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FYJ C6 C10 C 0 1 N N N 101.569 -75.340 -30.172 -1.692 2.361 0.364 C6 FYJ 1 FYJ C3 C02 C 0 1 N N S 98.582 -75.482 -27.884 -2.487 -1.288 -0.476 C3 FYJ 2 FYJ C2 C03 C 0 1 N N R 99.062 -74.602 -26.780 -1.219 -1.862 0.164 C2 FYJ 3 FYJ C1 C05 C 0 1 N N S 100.588 -74.433 -26.686 -0.043 -0.925 -0.123 C1 FYJ 4 FYJ C5 C07 C 0 1 N N S 100.754 -75.443 -28.884 -1.490 0.986 -0.218 C5 FYJ 5 FYJ C4 C08 C 0 1 N N S 99.302 -75.188 -29.167 -2.724 0.125 0.065 C4 FYJ 6 FYJ C14 C14 C 0 1 Y N N 102.855 -72.920 -25.268 2.704 -0.455 0.135 C14 FYJ 7 FYJ C15 C15 C 0 1 Y N N 103.870 -72.694 -26.187 2.382 0.591 -0.721 C15 FYJ 8 FYJ C16 C16 C 0 1 Y N N 105.241 -72.685 -25.780 3.368 1.458 -1.150 C16 FYJ 9 FYJ C17 C17 C 0 1 Y N N 105.560 -72.921 -24.479 4.674 1.286 -0.729 C17 FYJ 10 FYJ C18 C18 C 0 1 Y N N 104.539 -73.167 -23.541 4.998 0.246 0.124 C18 FYJ 11 FYJ C19 C19 C 0 1 Y N N 103.179 -73.149 -23.948 4.017 -0.624 0.557 C19 FYJ 12 FYJ O3 O01 O 0 1 N N N 97.191 -75.296 -28.101 -3.604 -2.119 -0.154 O3 FYJ 13 FYJ O2 O04 O 0 1 N N N 98.623 -75.081 -25.518 -0.948 -3.151 -0.388 O2 FYJ 14 FYJ O5 O06 O 0 1 N N N 101.223 -74.392 -28.019 -0.342 0.380 0.379 O5 FYJ 15 FYJ O4 O09 O 0 1 N N N 98.901 -75.985 -30.326 -3.864 0.699 -0.579 O4 FYJ 16 FYJ O11 O11 O 0 1 N N N 101.670 -76.360 -30.907 -0.986 2.744 1.267 O11 FYJ 17 FYJ O6 O12 O 0 1 N N N 102.111 -74.219 -30.427 -2.652 3.162 -0.124 O6 FYJ 18 FYJ S13 S13 S 0 1 N N N 101.083 -72.892 -25.799 1.449 -1.559 0.691 S13 FYJ 19 FYJ H3 H1 H 0 1 N N N 98.775 -76.529 -27.608 -2.363 -1.247 -1.559 H3 FYJ 20 FYJ H2 H2 H 0 1 N N N 98.635 -73.601 -26.942 -1.362 -1.948 1.241 H2 FYJ 21 FYJ H1 H3 H 0 1 N N N 101.006 -75.264 -26.098 0.125 -0.871 -1.199 H1 FYJ 22 FYJ H5 H4 H 0 1 N N N 100.891 -76.434 -28.426 -1.341 1.065 -1.294 H5 FYJ 23 FYJ H4 H5 H 0 1 N N N 99.174 -74.121 -29.403 -2.897 0.079 1.140 H4 FYJ 24 FYJ H6 H6 H 0 1 N N N 103.621 -72.523 -27.224 1.363 0.725 -1.051 H6 FYJ 25 FYJ H7 H7 H 0 1 N N N 106.020 -72.492 -26.503 3.118 2.271 -1.816 H7 FYJ 26 FYJ H8 H8 H 0 1 N N N 106.594 -72.920 -24.166 5.443 1.965 -1.067 H8 FYJ 27 FYJ H9 H9 H 0 1 N N N 104.791 -73.370 -22.511 6.018 0.115 0.451 H9 FYJ 28 FYJ H10 H10 H 0 1 N N N 102.397 -73.315 -23.222 4.271 -1.436 1.223 H10 FYJ 29 FYJ HO3 H11 H 0 1 N Y N 96.718 -75.478 -27.298 -3.517 -3.031 -0.462 HO3 FYJ 30 FYJ HO2 H12 H 0 1 N Y N 98.941 -74.505 -24.832 -0.157 -3.575 -0.028 HO2 FYJ 31 FYJ HO4 H13 H 0 1 N Y N 99.675 -76.292 -30.783 -4.070 1.597 -0.287 HO4 FYJ 32 FYJ HO6 H14 H 0 1 N Y N 102.593 -74.278 -31.244 -2.743 4.035 0.282 HO6 FYJ 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FYJ O11 C6 DOUB N N 1 FYJ O6 C6 SING N N 2 FYJ O4 C4 SING N N 3 FYJ C6 C5 SING N N 4 FYJ C4 C5 SING N N 5 FYJ C4 C3 SING N N 6 FYJ C5 O5 SING N N 7 FYJ O3 C3 SING N N 8 FYJ O5 C1 SING N N 9 FYJ C3 C2 SING N N 10 FYJ C2 C1 SING N N 11 FYJ C2 O2 SING N N 12 FYJ C1 S13 SING N N 13 FYJ C15 C16 DOUB Y N 14 FYJ C15 C14 SING Y N 15 FYJ S13 C14 SING N N 16 FYJ C16 C17 SING Y N 17 FYJ C14 C19 DOUB Y N 18 FYJ C17 C18 DOUB Y N 19 FYJ C19 C18 SING Y N 20 FYJ C3 H3 SING N N 21 FYJ C2 H2 SING N N 22 FYJ C1 H1 SING N N 23 FYJ C5 H5 SING N N 24 FYJ C4 H4 SING N N 25 FYJ C15 H6 SING N N 26 FYJ C16 H7 SING N N 27 FYJ C17 H8 SING N N 28 FYJ C18 H9 SING N N 29 FYJ C19 H10 SING N N 30 FYJ O3 HO3 SING N N 31 FYJ O2 HO2 SING N N 32 FYJ O4 HO4 SING N N 33 FYJ O6 HO6 SING N N 34 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FYJ SMILES ACDLabs 12.01 "C(C1OC(C(C(C1O)O)O)Sc2ccccc2)(=O)O" FYJ InChI InChI 1.03 "InChI=1S/C12H14O6S/c13-7-8(14)10(11(16)17)18-12(9(7)15)19-6-4-2-1-3-5-6/h1-5,7-10,12-15H,(H,16,17)/t7-,8-,9+,10-,12-/m0/s1" FYJ InChIKey InChI 1.03 XXJOOMMTHULGSD-LIJGXYGRSA-N FYJ SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1[C@@H](O)[C@@H](O[C@@H]([C@H]1O)C(O)=O)Sc2ccccc2" FYJ SMILES CACTVS 3.385 "O[CH]1[CH](O)[CH](O[CH]([CH]1O)C(O)=O)Sc2ccccc2" FYJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)S[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)C(=O)O)O)O)O" FYJ SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)SC2C(C(C(C(O2)C(=O)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FYJ "SYSTEMATIC NAME" ACDLabs 12.01 "phenyl 1-thio-beta-D-glucopyranosiduronic acid" FYJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S},3~{S},4~{S},5~{R},6~{S})-3,4,5-tris(oxidanyl)-6-phenylsulfanyl-oxane-2-carboxylic acid" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support FYJ "CARBOHYDRATE ISOMER" D PDB ? FYJ "CARBOHYDRATE RING" pyranose PDB ? FYJ "CARBOHYDRATE ANOMER" beta PDB ? FYJ "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FYJ "Create component" 2018-04-25 RCSB FYJ "Initial release" 2018-10-17 RCSB FYJ "Other modification" 2020-07-03 RCSB FYJ "Modify synonyms" 2020-07-17 RCSB FYJ "Modify internal type" 2020-07-17 RCSB FYJ "Modify linking type" 2020-07-17 RCSB FYJ "Modify atom id" 2020-07-17 RCSB FYJ "Modify component atom id" 2020-07-17 RCSB FYJ "Modify leaving atom flag" 2020-07-17 RCSB ##