data_FZQ # _chem_comp.id FZQ _chem_comp.name "5'-O-(N-(L-seryl)-sulfamoyl)cytidine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H19 N5 O9 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-08-20 _chem_comp.pdbx_modified_date 2019-11-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 409.372 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FZQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6HE3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FZQ O1S O1 O 0 1 N N N -27.252 -13.424 13.263 3.353 -2.677 -0.600 O1S FZQ 1 FZQ O2S O2 O 0 1 N N N -27.887 -14.844 11.340 3.854 -1.563 1.581 O2S FZQ 2 FZQ N N1 N 0 1 N N N -32.288 -11.505 14.019 2.578 3.309 0.287 N FZQ 3 FZQ CA C1 C 0 1 N N S -31.766 -12.710 13.363 3.280 2.256 -0.459 CA FZQ 4 FZQ C C2 C 0 1 N N N -30.291 -12.560 13.172 3.112 0.939 0.253 C FZQ 5 FZQ O O3 O 0 1 N N N -29.692 -11.515 13.430 2.803 0.919 1.426 O FZQ 6 FZQ CB C3 C 0 1 N N N -32.446 -12.894 12.009 4.768 2.601 -0.549 CB FZQ 7 FZQ OG O4 O 0 1 N N N -32.211 -11.766 11.185 4.937 3.789 -1.324 OG FZQ 8 FZQ "C1'" C4 C 0 1 N N R -26.202 -11.039 7.948 -2.580 -0.969 0.549 "C1'" FZQ 9 FZQ C2 C5 C 0 1 N N N -24.292 -9.448 7.887 -2.812 1.182 -0.562 C2 FZQ 10 FZQ "C2'" C6 C 0 1 N N R -26.150 -12.523 7.521 -2.898 -1.814 -0.705 "C2'" FZQ 11 FZQ "C3'" C7 C 0 1 N N S -27.135 -13.196 8.487 -1.605 -2.624 -0.950 "C3'" FZQ 12 FZQ C4 C8 C 0 1 N N N -22.745 -9.354 9.664 -4.262 2.826 0.168 C4 FZQ 13 FZQ "C4'" C9 C 0 1 N N R -28.091 -12.064 8.823 -0.660 -2.173 0.185 "C4'" FZQ 14 FZQ C5 C10 C 0 1 N N N -23.385 -10.446 10.333 -4.675 1.989 1.224 C5 FZQ 15 FZQ "C5'" C11 C 0 1 N N N -28.888 -12.225 10.092 0.780 -2.083 -0.325 "C5'" FZQ 16 FZQ C6 C12 C 0 1 N N N -24.463 -10.996 9.738 -4.123 0.757 1.340 C6 FZQ 17 FZQ N1 N2 N 0 1 N N N -24.945 -10.507 8.533 -3.185 0.360 0.435 N1 FZQ 18 FZQ N3 N3 N 0 1 N N N -23.183 -8.904 8.476 -3.345 2.396 -0.689 N3 FZQ 19 FZQ N3S N4 N 0 1 N N N -29.596 -13.707 12.640 3.304 -0.217 -0.413 N3S FZQ 20 FZQ N4 N5 N 0 1 N N N -21.716 -8.717 10.237 -4.806 4.081 0.027 N4 FZQ 21 FZQ O2 O5 O 0 1 N N N -24.764 -8.998 6.837 -1.967 0.812 -1.361 O2 FZQ 22 FZQ "O2'" O6 O 0 1 N N N -26.596 -12.673 6.179 -3.998 -2.690 -0.453 "O2'" FZQ 23 FZQ "O3'" O7 O 0 1 N N N -27.863 -14.244 7.861 -1.868 -4.026 -0.856 "O3'" FZQ 24 FZQ "O4'" O8 O 0 1 N N N -27.240 -10.907 8.906 -1.140 -0.866 0.569 "O4'" FZQ 25 FZQ "O5'" O9 O 0 1 N N N -27.950 -12.401 11.201 1.653 -1.779 0.764 "O5'" FZQ 26 FZQ S S1 S 0 1 N N N -28.081 -13.689 12.140 3.119 -1.664 0.369 S FZQ 27 FZQ H1 H1 H 0 1 N N N -31.841 -11.387 14.906 1.584 3.138 0.305 H1 FZQ 28 FZQ H2 H2 H 0 1 N N N -32.105 -10.707 13.445 2.947 3.397 1.222 H2 FZQ 29 FZQ H4 H4 H 0 1 N N N -31.967 -13.592 13.988 2.863 2.183 -1.463 H4 FZQ 30 FZQ H5 H5 H 0 1 N N N -33.529 -13.014 12.160 5.165 2.762 0.454 H5 FZQ 31 FZQ H6 H6 H 0 1 N N N -32.042 -13.792 11.519 5.304 1.778 -1.024 H6 FZQ 32 FZQ H7 H7 H 0 1 N N N -32.638 -11.892 10.346 5.857 4.067 -1.423 H7 FZQ 33 FZQ H8 H8 H 0 1 N N N -26.451 -10.443 7.057 -2.937 -1.472 1.448 H8 FZQ 34 FZQ H9 H9 H 0 1 N N N -25.136 -12.925 7.667 -3.111 -1.168 -1.557 H9 FZQ 35 FZQ H10 H10 H 0 1 N N N -26.610 -13.540 9.391 -1.179 -2.378 -1.922 H10 FZQ 36 FZQ H11 H11 H 0 1 N N N -28.792 -11.943 7.984 -0.722 -2.862 1.028 H11 FZQ 37 FZQ H12 H12 H 0 1 N N N -23.018 -10.816 11.279 -5.421 2.324 1.930 H12 FZQ 38 FZQ H13 H13 H 0 1 N N N -29.502 -11.328 10.262 1.069 -3.036 -0.767 H13 FZQ 39 FZQ H14 H14 H 0 1 N N N -29.541 -13.107 10.013 0.850 -1.297 -1.077 H14 FZQ 40 FZQ H15 H15 H 0 1 N N N -24.960 -11.832 10.208 -4.423 0.098 2.141 H15 FZQ 41 FZQ H16 H16 H 0 1 N N N -30.097 -14.570 12.581 3.552 -0.200 -1.351 H16 FZQ 42 FZQ H17 H17 H 0 1 N N N -21.298 -7.932 9.781 -5.477 4.393 0.655 H17 FZQ 43 FZQ H18 H18 H 0 1 N N N -21.366 -9.027 11.121 -4.520 4.655 -0.701 H18 FZQ 44 FZQ H19 H19 H 0 1 N N N -26.558 -13.590 5.933 -4.241 -3.244 -1.207 H19 FZQ 45 FZQ H20 H20 H 0 1 N N N -28.460 -14.634 8.489 -2.503 -4.351 -1.508 H20 FZQ 46 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FZQ "O2'" "C2'" SING N N 1 FZQ O2 C2 DOUB N N 2 FZQ "C2'" "C1'" SING N N 3 FZQ "C2'" "C3'" SING N N 4 FZQ "O3'" "C3'" SING N N 5 FZQ C2 N3 SING N N 6 FZQ C2 N1 SING N N 7 FZQ "C1'" N1 SING N N 8 FZQ "C1'" "O4'" SING N N 9 FZQ N3 C4 DOUB N N 10 FZQ "C3'" "C4'" SING N N 11 FZQ N1 C6 SING N N 12 FZQ "C4'" "O4'" SING N N 13 FZQ "C4'" "C5'" SING N N 14 FZQ C4 N4 SING N N 15 FZQ C4 C5 SING N N 16 FZQ C6 C5 DOUB N N 17 FZQ "C5'" "O5'" SING N N 18 FZQ OG CB SING N N 19 FZQ "O5'" S SING N N 20 FZQ O2S S DOUB N N 21 FZQ CB CA SING N N 22 FZQ S N3S SING N N 23 FZQ S O1S DOUB N N 24 FZQ N3S C SING N N 25 FZQ C CA SING N N 26 FZQ C O DOUB N N 27 FZQ CA N SING N N 28 FZQ N H1 SING N N 29 FZQ N H2 SING N N 30 FZQ CA H4 SING N N 31 FZQ CB H5 SING N N 32 FZQ CB H6 SING N N 33 FZQ OG H7 SING N N 34 FZQ "C1'" H8 SING N N 35 FZQ "C2'" H9 SING N N 36 FZQ "C3'" H10 SING N N 37 FZQ "C4'" H11 SING N N 38 FZQ C5 H12 SING N N 39 FZQ "C5'" H13 SING N N 40 FZQ "C5'" H14 SING N N 41 FZQ C6 H15 SING N N 42 FZQ N3S H16 SING N N 43 FZQ N4 H17 SING N N 44 FZQ N4 H18 SING N N 45 FZQ "O2'" H19 SING N N 46 FZQ "O3'" H20 SING N N 47 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FZQ InChI InChI 1.03 "InChI=1S/C12H19N5O9S/c13-5(3-18)10(21)16-27(23,24)25-4-6-8(19)9(20)11(26-6)17-2-1-7(14)15-12(17)22/h1-2,5-6,8-9,11,18-20H,3-4,13H2,(H,16,21)(H2,14,15,22)/t5-,6+,8+,9+,11+/m0/s1" FZQ InChIKey InChI 1.03 KLHALWQAANSHJB-DANLAGSESA-N FZQ SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CO)C(=O)N[S](=O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N2C=CC(=NC2=O)N" FZQ SMILES CACTVS 3.385 "N[CH](CO)C(=O)N[S](=O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)N2C=CC(=NC2=O)N" FZQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)COS(=O)(=O)NC(=O)[C@H](CO)N)O)O" FZQ SMILES "OpenEye OEToolkits" 2.0.6 "C1=CN(C(=O)N=C1N)C2C(C(C(O2)COS(=O)(=O)NC(=O)C(CO)N)O)O" # _pdbx_chem_comp_identifier.comp_id FZQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(2~{S})-2-azanyl-3-oxidanyl-propanoyl]sulfamate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FZQ "Create component" 2018-08-20 EBI FZQ "Initial release" 2019-12-04 RCSB ##