data_G0C # _chem_comp.id G0C _chem_comp.name "[6-methyl-4-[(E)-3-methylsulfanylpropyliminomethyl]-5-oxidanyl-pyridin-3-yl]methyl dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H19 N2 O5 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-07-14 _chem_comp.pdbx_modified_date 2021-01-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 334.328 _chem_comp.one_letter_code ? _chem_comp.three_letter_code G0C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7CIJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal G0C C4 C1 C 0 1 Y N N 25.649 13.757 48.777 0.323 -1.356 0.238 C4 G0C 1 G0C C5 C2 C 0 1 Y N N 24.914 12.854 49.564 1.640 -0.934 0.023 C5 G0C 2 G0C C6 C3 C 0 1 Y N N 23.935 13.307 50.423 2.593 -1.867 -0.331 C6 G0C 3 G0C N1 N1 N 0 1 Y N N 23.719 14.639 50.546 2.280 -3.141 -0.468 N1 G0C 4 G0C C3 C4 C 0 1 Y N N 25.365 15.139 48.950 0.032 -2.721 0.081 C3 G0C 5 G0C OP1 O1 O 0 1 N N N 28.410 9.834 50.311 3.557 3.079 -1.171 OP1 G0C 6 G0C P P1 P 0 1 N N N 27.171 9.693 49.589 4.148 2.111 -0.028 P G0C 7 G0C OP2 O2 O 0 1 N N N 26.248 8.563 49.967 5.728 1.905 -0.263 OP2 G0C 8 G0C OP3 O3 O 0 1 N N N 27.257 9.846 48.126 3.922 2.721 1.301 OP3 G0C 9 G0C OP4 O4 O 0 1 N N N 26.410 11.073 50.065 3.405 0.684 -0.097 OP4 G0C 10 G0C C5A C5 C 0 1 N N N 25.135 11.324 49.481 2.012 0.518 0.175 C5A G0C 11 G0C C2 C6 C 0 1 Y N N 24.380 15.555 49.821 1.056 -3.587 -0.277 C2 G0C 12 G0C C2A C7 C 0 1 N N N 24.058 17.003 50.074 0.763 -5.055 -0.449 C2A G0C 13 G0C O3 O5 O 0 1 N N N 26.012 16.087 48.239 -1.228 -3.185 0.278 O3 G0C 14 G0C C4A C8 C 0 1 N N N 26.656 13.340 47.897 -0.729 -0.395 0.623 C4A G0C 15 G0C N N2 N 0 1 N N N 27.075 14.127 46.922 -1.939 -0.806 0.823 N G0C 16 G0C CA C9 C 0 1 N N N 28.214 13.867 46.063 -2.983 0.148 1.206 CA G0C 17 G0C CB C10 C 0 1 N N N 29.019 12.612 46.184 -4.031 0.231 0.094 CB G0C 18 G0C CG C11 C 0 1 N N N 30.223 12.475 45.339 -5.121 1.227 0.494 CG G0C 19 G0C SD S1 S 0 1 N N N 31.473 13.582 46.071 -6.363 1.325 -0.824 SD G0C 20 G0C CE C12 C 0 1 N N N 32.000 12.578 47.462 -7.550 2.534 -0.176 CE G0C 21 G0C H1 H1 H 0 1 N N N 23.345 12.605 50.994 3.611 -1.548 -0.499 H1 G0C 22 G0C H2 H2 H 0 1 N N N 29.115 10.011 49.699 3.671 2.742 -2.070 H2 G0C 23 G0C H3 H3 H 0 1 N N N 25.897 8.164 49.180 6.240 2.725 -0.235 H3 G0C 24 G0C H4 H4 H 0 1 N N N 24.349 10.795 50.040 1.431 1.118 -0.526 H4 G0C 25 G0C H5 H5 H 0 1 N N N 25.125 10.994 48.432 1.800 0.843 1.194 H5 G0C 26 G0C H6 H6 H 0 1 N N N 23.289 17.077 50.857 0.479 -5.250 -1.484 H6 G0C 27 G0C H7 H7 H 0 1 N N N 24.967 17.529 50.402 1.652 -5.635 -0.201 H7 G0C 28 G0C H8 H8 H 0 1 N N N 23.683 17.462 49.148 -0.055 -5.342 0.212 H8 G0C 29 G0C H9 H9 H 0 1 N N N 25.691 16.945 48.489 -1.777 -3.183 -0.519 H9 G0C 30 G0C H10 H10 H 0 1 N N N 27.096 12.361 48.017 -0.488 0.652 0.739 H10 G0C 31 G0C H11 H11 H 0 1 N N N 28.915 14.700 46.218 -3.457 -0.184 2.129 H11 G0C 32 G0C H12 H12 H 0 1 N N N 28.352 11.771 45.942 -3.556 0.563 -0.829 H12 G0C 33 G0C H13 H13 H 0 1 N N N 30.002 12.778 44.305 -5.596 0.895 1.417 H13 G0C 34 G0C H14 H14 H 0 1 N N N 30.581 11.435 45.348 -4.676 2.210 0.648 H14 G0C 35 G0C H15 H15 H 0 1 N N N 32.776 13.114 48.028 -7.045 3.485 -0.006 H15 G0C 36 G0C H16 H16 H 0 1 N N N 31.139 12.379 48.118 -8.355 2.675 -0.897 H16 G0C 37 G0C H17 H17 H 0 1 N N N 32.407 11.625 47.093 -7.965 2.169 0.764 H17 G0C 38 G0C H18 H18 H 0 1 N N N 27.835 13.893 45.031 -2.538 1.131 1.360 H18 G0C 39 G0C H19 H19 H 0 1 N N N 29.344 12.532 47.232 -4.476 -0.752 -0.060 H19 G0C 40 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal G0C CG SD SING N N 1 G0C CG CB SING N N 2 G0C CA CB SING N N 3 G0C CA N SING N N 4 G0C SD CE SING N N 5 G0C N C4A DOUB N N 6 G0C C4A C4 SING N N 7 G0C OP3 P DOUB N N 8 G0C O3 C3 SING N N 9 G0C C4 C3 DOUB Y N 10 G0C C4 C5 SING Y N 11 G0C C3 C2 SING Y N 12 G0C C5A C5 SING N N 13 G0C C5A OP4 SING N N 14 G0C C5 C6 DOUB Y N 15 G0C P OP2 SING N N 16 G0C P OP4 SING N N 17 G0C P OP1 SING N N 18 G0C C2 C2A SING N N 19 G0C C2 N1 DOUB Y N 20 G0C C6 N1 SING Y N 21 G0C C6 H1 SING N N 22 G0C OP1 H2 SING N N 23 G0C OP2 H3 SING N N 24 G0C C5A H4 SING N N 25 G0C C5A H5 SING N N 26 G0C C2A H6 SING N N 27 G0C C2A H7 SING N N 28 G0C C2A H8 SING N N 29 G0C O3 H9 SING N N 30 G0C C4A H10 SING N N 31 G0C CA H11 SING N N 32 G0C CB H12 SING N N 33 G0C CG H13 SING N N 34 G0C CG H14 SING N N 35 G0C CE H15 SING N N 36 G0C CE H16 SING N N 37 G0C CE H17 SING N N 38 G0C CA H18 SING N N 39 G0C CB H19 SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor G0C InChI InChI 1.03 "InChI=1S/C12H19N2O5PS/c1-9-12(15)11(7-13-4-3-5-21-2)10(6-14-9)8-19-20(16,17)18/h6-7,15H,3-5,8H2,1-2H3,(H2,16,17,18)/b13-7+" G0C InChIKey InChI 1.03 BEOXZSCYUHRCGB-NTUHNPAUSA-N G0C SMILES_CANONICAL CACTVS 3.385 "CSCCCN=Cc1c(O)c(C)ncc1CO[P](O)(O)=O" G0C SMILES CACTVS 3.385 "CSCCCN=Cc1c(O)c(C)ncc1CO[P](O)(O)=O" G0C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/CCCSC)O" G0C SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(cn1)COP(=O)(O)O)C=NCCCSC)O" # _pdbx_chem_comp_identifier.comp_id G0C _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[6-methyl-4-[(~{E})-3-methylsulfanylpropyliminomethyl]-5-oxidanyl-pyridin-3-yl]methyl dihydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site G0C "Create component" 2020-07-14 PDBJ G0C "Initial release" 2021-01-27 RCSB ##