data_G0S # _chem_comp.id G0S _chem_comp.name "3-(beta-D-galactopyranosylthio)propanoic acid" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C9 H16 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "3-(beta-D-galactosylthio)propanoic acid; 3-(D-galactosylthio)propanoic acid; 3-(galactosylthio)propanoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-08-23 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 268.284 _chem_comp.one_letter_code ? _chem_comp.three_letter_code G0S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3ZYH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 G0S "3-(beta-D-galactosylthio)propanoic acid" PDB ? 2 G0S "3-(D-galactosylthio)propanoic acid" PDB ? 3 G0S "3-(galactosylthio)propanoic acid" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal G0S C1 C1 C 0 1 N N S 11.679 -47.048 -39.947 -0.537 -0.587 -0.320 C1 G0S 1 G0S C2 C2 C 0 1 N N R 13.063 -47.481 -39.460 -1.766 -1.439 0.005 C2 G0S 2 G0S O2 O2 O 0 1 N N N 14.012 -47.461 -40.518 -1.592 -2.753 -0.530 O2 G0S 3 G0S C3 C3 C 0 1 N N S 13.012 -48.817 -38.880 -3.006 -0.792 -0.621 C3 G0S 4 G0S O3 O3 O 0 1 N N N 14.302 -49.132 -38.362 -4.169 -1.541 -0.261 O3 G0S 5 G0S C4 C4 C 0 1 N N R 12.050 -48.937 -37.845 -3.138 0.642 -0.100 C4 G0S 6 G0S O4 O4 O 0 1 N N N 12.537 -48.304 -36.656 -3.340 0.620 1.314 O4 G0S 7 G0S C5 C5 C 0 1 N N R 10.744 -48.234 -38.095 -1.855 1.414 -0.421 C5 G0S 8 G0S O5 O5 O 0 1 N N N 10.729 -47.015 -38.922 -0.738 0.743 0.164 O5 G0S 9 G0S C6 C6 C 0 1 N N N 9.661 -48.480 -37.137 -1.956 2.830 0.149 C6 G0S 10 G0S O6 O6 O 0 1 N N N 8.380 -48.146 -37.524 -0.811 3.586 -0.250 O6 G0S 11 G0S S1 S1 S 0 1 N N N 11.724 -45.434 -40.660 0.926 -1.306 0.476 S1 G0S 12 G0S C1A C1A C 0 1 N N N 10.280 -45.251 -41.658 2.279 -0.267 -0.140 C1A G0S 13 G0S C3A C3A C 0 1 N N N ? ? ? 4.728 0.111 -0.062 C3A G0S 14 G0S C2A C2A C 0 1 N N N ? ? ? 3.604 -0.753 0.450 C2A G0S 15 G0S O3A O3A O 0 1 N N N ? ? ? 4.494 1.021 -0.821 O3A G0S 16 G0S OXT OXT O 0 1 N Y N ? ? ? 5.991 -0.132 0.325 OXT G0S 17 G0S H1 H1 H 0 1 N N N 11.358 -47.728 -40.750 -0.387 -0.561 -1.400 H1 G0S 18 G0S H2 H2 H 0 1 N N N 13.379 -46.772 -38.680 -1.892 -1.499 1.086 H2 G0S 19 G0S HO2 HA H 0 1 N Y N 14.860 -47.733 -40.188 -0.821 -3.220 -0.180 HO2 G0S 20 G0S HO3 H3 H 0 1 N Y N 14.286 -50.001 -37.979 -4.150 -2.462 -0.554 HO3 G0S 21 G0S H4 H4 H 0 1 N N N 11.847 -49.999 -37.643 -3.987 1.128 -0.582 H4 G0S 22 G0S HO4 HB H 0 1 N Y N 11.890 -48.386 -35.965 -4.134 0.142 1.591 HO4 G0S 23 G0S H5 H5 H 0 1 N N N 10.382 -48.920 -38.875 -1.723 1.465 -1.502 H5 G0S 24 G0S H61 H6A H 0 1 N N N 9.665 -49.555 -36.904 -2.858 3.311 -0.229 H61 G0S 25 G0S H62 H6B H 0 1 N N N 9.890 -47.907 -36.227 -1.998 2.782 1.237 H62 G0S 26 G0S HO6 H6 H 0 1 N Y N 7.773 -48.351 -36.823 -0.807 4.497 0.077 HO6 G0S 27 G0S H1A H1A H 0 1 N N N 10.445 -44.927 -42.696 2.320 -0.331 -1.227 H1A G0S 28 G0S H1B H1B H 0 1 N N N 9.572 -46.092 -41.645 2.107 0.768 0.156 H1B G0S 29 G0S H2A H2A H 0 1 N N N ? ? ? 3.563 -0.688 1.537 H2A G0S 30 G0S H2B H2B H 0 1 N N N ? ? ? 3.777 -1.787 0.153 H2B G0S 31 G0S HXT HXT H 0 1 N N N ? ? ? 6.678 0.449 -0.030 HXT G0S 32 G0S H3 HC H 0 1 N N N 12.767 -49.532 -39.679 -2.902 -0.779 -1.706 H3 G0S 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal G0S C1 C2 SING N N 1 G0S C1 O5 SING N N 2 G0S C1 S1 SING N N 3 G0S C2 O2 SING N N 4 G0S C2 C3 SING N N 5 G0S C3 O3 SING N N 6 G0S C3 C4 SING N N 7 G0S C4 O4 SING N N 8 G0S C4 C5 SING N N 9 G0S C5 O5 SING N N 10 G0S C5 C6 SING N N 11 G0S C6 O6 SING N N 12 G0S S1 C1A SING N N 13 G0S C1A C2A SING N N 14 G0S C2A C3A SING N N 15 G0S C3A O3A DOUB N N 16 G0S C3A OXT SING N N 17 G0S C1 H1 SING N N 18 G0S C2 H2 SING N N 19 G0S O2 HO2 SING N N 20 G0S C4 H4 SING N N 21 G0S O4 HO4 SING N N 22 G0S C5 H5 SING N N 23 G0S C6 H61 SING N N 24 G0S C6 H62 SING N N 25 G0S O6 HO6 SING N N 26 G0S C1A H1A SING N N 27 G0S C1A H1B SING N N 28 G0S O3 HO3 SING N N 29 G0S C2A H2A SING N N 30 G0S C2A H2B SING N N 31 G0S OXT HXT SING N N 32 G0S C3 H3 SING N N 33 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor G0S SMILES ACDLabs 12.01 "O=C(O)CCSC1OC(C(O)C(O)C1O)CO" G0S InChI InChI 1.03 "InChI=1S/C9H16O7S/c10-3-4-6(13)7(14)8(15)9(16-4)17-2-1-5(11)12/h4,6-10,13-15H,1-3H2,(H,11,12)/t4-,6+,7+,8-,9+/m1/s1" G0S InChIKey InChI 1.03 XMQYQVUZHDCFEM-MRCFXUCSSA-N G0S SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@@H](SCCC(O)=O)[C@H](O)[C@@H](O)[C@H]1O" G0S SMILES CACTVS 3.385 "OC[CH]1O[CH](SCCC(O)=O)[CH](O)[CH](O)[CH]1O" G0S SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C(CS[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O)O)C(=O)O" G0S SMILES "OpenEye OEToolkits" 1.9.2 "C(CSC1C(C(C(C(O1)CO)O)O)O)C(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier G0S "SYSTEMATIC NAME" ACDLabs 12.01 "3-(beta-D-galactopyranosylthio)propanoic acid" G0S "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "3-[(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]sulfanylpropanoic acid" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support G0S "CARBOHYDRATE ISOMER" D PDB ? G0S "CARBOHYDRATE RING" pyranose PDB ? G0S "CARBOHYDRATE ANOMER" beta PDB ? G0S "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site G0S "Create component" 2011-08-23 EBI G0S "Modify descriptor" 2014-09-05 RCSB G0S "Other modification" 2020-07-03 RCSB G0S "Modify synonyms" 2020-07-17 RCSB G0S "Modify internal type" 2020-07-17 RCSB G0S "Modify linking type" 2020-07-17 RCSB G0S "Modify atom id" 2020-07-17 RCSB G0S "Modify component atom id" 2020-07-17 RCSB G0S "Modify leaving atom flag" 2020-07-17 RCSB ##