data_G2Y # _chem_comp.id G2Y _chem_comp.name "1,6-dichloro-1,6-dideoxy-alpha-L-sorbofuranosyl 4-chloro-4-deoxy-beta-D-galactopyranoside" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H19 Cl3 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-05-03 _chem_comp.pdbx_modified_date 2020-04-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status OBS _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 397.633 _chem_comp.one_letter_code ? _chem_comp.three_letter_code G2Y _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6CJV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal G2Y C01 C1 C 0 1 N N R -23.236 8.994 8.613 -3.397 -0.836 -0.435 C01 G2Y 1 G2Y C02 C2 C 0 1 N N R -24.732 9.087 8.769 -2.323 -1.922 -0.314 C02 G2Y 2 G2Y C03 C3 C 0 1 N N R -25.073 9.700 10.098 -1.255 -1.459 0.682 C03 G2Y 3 G2Y C04 C4 C 0 1 N N S -24.546 8.733 11.155 -0.678 -0.121 0.214 C04 G2Y 4 G2Y C06 C5 C 0 1 N N R -22.556 8.418 9.870 -2.737 0.478 -0.860 C06 G2Y 5 G2Y C10 C6 C 0 1 N N N -21.079 8.605 9.829 -3.794 1.582 -0.925 C10 G2Y 6 G2Y C13 C7 C 0 1 N N R -25.314 8.060 13.454 1.389 1.033 0.589 C13 G2Y 7 G2Y C14 C8 C 0 1 N N S -23.654 6.315 13.140 3.696 0.516 1.181 C14 G2Y 8 G2Y C15 C9 C 0 1 N N S -25.170 6.548 13.064 2.456 1.307 1.666 C15 G2Y 9 G2Y C17 C10 C 0 1 N N R -23.052 7.497 13.522 3.063 -0.524 0.222 C17 G2Y 10 G2Y C18 C11 C 0 1 N N N -26.679 8.731 13.332 0.922 2.353 -0.027 C18 G2Y 11 G2Y C21 C12 C 0 1 N N N -22.017 7.416 14.614 4.089 -1.000 -0.808 C21 G2Y 12 G2Y O05 O1 O 0 1 N N N -23.072 9.032 11.123 -1.733 0.835 0.093 O05 G2Y 13 G2Y O08 O2 O 0 1 N N N -25.333 9.843 7.680 -2.919 -3.134 0.153 O08 G2Y 14 G2Y O09 O3 O 0 1 N N N -26.476 9.986 10.270 -0.211 -2.433 0.749 O09 G2Y 15 G2Y O11 O4 O 0 1 N N N -20.565 7.769 10.854 -3.189 2.795 -1.379 O11 G2Y 16 G2Y O12 O5 O 0 1 N N N -25.125 8.988 12.346 0.279 0.344 1.168 O12 G2Y 17 G2Y O16 O6 O 0 1 N N N -24.211 8.532 13.949 2.001 0.213 -0.421 O16 G2Y 18 G2Y O19 O7 O 0 1 N N N -25.797 6.164 11.909 2.020 0.822 2.937 O19 G2Y 19 G2Y O20 O8 O 0 1 N N N -23.478 5.189 14.104 4.603 1.370 0.481 O20 G2Y 20 G2Y CL1 CL1 CL 0 0 N N N -22.514 10.660 8.266 -4.212 -0.614 1.158 CL1 G2Y 21 G2Y CL2 CL2 CL 0 0 N N N -21.546 9.015 15.318 3.367 -2.313 -1.812 CL2 G2Y 22 G2Y CL3 CL3 CL 0 0 N N N -27.180 8.426 15.005 -0.084 2.014 -1.485 CL3 G2Y 23 G2Y H011 H1 H 0 0 N N N -22.989 8.367 7.743 -4.132 -1.133 -1.184 H011 G2Y 24 G2Y H021 H2 H 0 0 N N N -25.138 8.065 8.752 -1.864 -2.092 -1.288 H021 G2Y 25 G2Y H031 H3 H 0 0 N N N -24.507 10.639 10.193 -1.705 -1.339 1.668 H031 G2Y 26 G2Y H041 H4 H 0 0 N N N -24.721 7.699 10.823 -0.193 -0.252 -0.753 H041 G2Y 27 G2Y H061 H5 H 0 0 N N N -22.768 7.339 9.900 -2.279 0.354 -1.841 H061 G2Y 28 G2Y H102 H6 H 0 0 N N N -20.680 8.303 8.850 -4.583 1.289 -1.617 H102 G2Y 29 G2Y H101 H7 H 0 0 N N N -20.819 9.656 10.023 -4.219 1.737 0.066 H101 G2Y 30 G2Y H141 H8 H 0 0 N N N -23.298 5.999 12.148 4.195 0.023 2.016 H141 G2Y 31 G2Y H151 H9 H 0 0 N N N -25.609 5.980 13.898 2.680 2.372 1.720 H151 G2Y 32 G2Y H171 H10 H 0 0 N N N -22.560 7.941 12.644 2.661 -1.368 0.783 H171 G2Y 33 G2Y H182 H11 H 0 0 N N N -26.607 9.803 13.098 0.329 2.905 0.702 H182 G2Y 34 G2Y H181 H12 H 0 0 N N N -27.331 8.238 12.596 1.789 2.948 -0.315 H181 G2Y 35 G2Y H211 H13 H 0 0 N N N -22.419 6.789 15.423 4.373 -0.167 -1.450 H211 G2Y 36 G2Y H212 H14 H 0 0 N N N -21.115 6.944 14.198 4.971 -1.380 -0.294 H212 G2Y 37 G2Y H081 H15 H 0 0 N N N -26.274 9.885 7.805 -3.611 -3.481 -0.427 H081 G2Y 38 G2Y H091 H16 H 0 0 N N N -26.619 10.370 11.127 -0.507 -3.308 1.034 H091 G2Y 39 G2Y H111 H17 H 0 0 N N N -19.618 7.844 10.879 -3.802 3.540 -1.444 H111 G2Y 40 G2Y H191 H18 H 0 0 N N N -26.725 6.354 11.974 2.676 0.915 3.641 H191 G2Y 41 G2Y H201 H19 H 0 0 N N N -22.553 4.993 14.197 5.351 0.905 0.081 H201 G2Y 42 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal G2Y O08 C02 SING N N 1 G2Y CL1 C01 SING N N 2 G2Y C01 C02 SING N N 3 G2Y C01 C06 SING N N 4 G2Y C02 C03 SING N N 5 G2Y C10 C06 SING N N 6 G2Y C10 O11 SING N N 7 G2Y C06 O05 SING N N 8 G2Y C03 O09 SING N N 9 G2Y C03 C04 SING N N 10 G2Y O05 C04 SING N N 11 G2Y C04 O12 SING N N 12 G2Y O19 C15 SING N N 13 G2Y O12 C13 SING N N 14 G2Y C15 C14 SING N N 15 G2Y C15 C13 SING N N 16 G2Y C14 C17 SING N N 17 G2Y C14 O20 SING N N 18 G2Y C18 C13 SING N N 19 G2Y C18 CL3 SING N N 20 G2Y C13 O16 SING N N 21 G2Y C17 O16 SING N N 22 G2Y C17 C21 SING N N 23 G2Y C21 CL2 SING N N 24 G2Y C01 H011 SING N N 25 G2Y C02 H021 SING N N 26 G2Y C03 H031 SING N N 27 G2Y C04 H041 SING N N 28 G2Y C06 H061 SING N N 29 G2Y C10 H102 SING N N 30 G2Y C10 H101 SING N N 31 G2Y C14 H141 SING N N 32 G2Y C15 H151 SING N N 33 G2Y C17 H171 SING N N 34 G2Y C18 H182 SING N N 35 G2Y C18 H181 SING N N 36 G2Y C21 H211 SING N N 37 G2Y C21 H212 SING N N 38 G2Y O08 H081 SING N N 39 G2Y O09 H091 SING N N 40 G2Y O11 H111 SING N N 41 G2Y O19 H191 SING N N 42 G2Y O20 H201 SING N N 43 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor G2Y SMILES ACDLabs 12.01 "C2(C(C(O)C(OC1(OC(C(O)C1O)CCl)CCl)OC2CO)O)Cl" G2Y InChI InChI 1.03 "InChI=1S/C12H19Cl3O8/c13-1-4-7(17)10(20)12(3-14,22-4)23-11-9(19)8(18)6(15)5(2-16)21-11/h4-11,16-20H,1-3H2/t4-,5+,6-,7+,8-,9+,10-,11-,12-/m0/s1" G2Y InChIKey InChI 1.03 BAQAVOSOZGMPRM-RGUBMTAVSA-N G2Y SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@@H](O[C@]2(CCl)O[C@@H](CCl)[C@@H](O)[C@@H]2O)[C@H](O)[C@@H](O)[C@H]1Cl" G2Y SMILES CACTVS 3.385 "OC[CH]1O[CH](O[C]2(CCl)O[CH](CCl)[CH](O)[CH]2O)[CH](O)[CH](O)[CH]1Cl" G2Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O[C@]2([C@H]([C@@H]([C@@H](O2)CCl)O)O)CCl)O)O)Cl)O" G2Y SMILES "OpenEye OEToolkits" 2.0.6 "C(C1C(C(C(C(O1)OC2(C(C(C(O2)CCl)O)O)CCl)O)O)Cl)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier G2Y "SYSTEMATIC NAME" ACDLabs 12.01 "1,6-dichloro-1,6-dideoxy-alpha-L-sorbofuranosyl 4-chloro-4-deoxy-beta-D-galactopyranoside" G2Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S},4~{S},5~{R})-2,5-bis(chloromethyl)-3,4-bis(oxidanyl)oxolan-2-yl]oxy-5-chloranyl-6-(hydroxymethyl)oxane-3,4-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site G2Y "Create component" 2018-05-03 RCSB G2Y "Initial release" 2018-08-08 RCSB G2Y "Obsolete component" 2020-04-16 RCSB ##