data_G3M # _chem_comp.id G3M _chem_comp.name "(3S)-N~6~-carbamimidoyl-3-hydroxy-L-lysine" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C7 H16 N4 O3" _chem_comp.mon_nstd_parent_comp_id ARG _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-05-03 _chem_comp.pdbx_modified_date 2018-05-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 204.227 _chem_comp.one_letter_code ? _chem_comp.three_letter_code G3M _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6DAZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal G3M O1 O1 O 0 1 N N N 12.555 4.603 19.442 -4.551 -0.431 -1.034 O1 G3M 1 G3M C9 C1 C 0 1 N N N 8.342 11.277 22.455 4.718 0.003 -0.058 C9 G3M 2 G3M C2 C2 C 0 1 N N N 12.389 5.824 19.643 -3.973 0.045 -0.086 C2 G3M 3 G3M C3 C3 C 0 1 N N S 11.595 6.627 18.646 -2.690 -0.575 0.403 C3 G3M 4 G3M C4 C4 C 0 1 N N S 10.120 6.785 19.046 -1.500 0.230 -0.124 C4 G3M 5 G3M C7 C5 C 0 1 N N N 9.915 10.039 21.088 2.296 -0.301 0.242 C7 G3M 6 G3M C6 C6 C 0 1 N N N 9.890 9.149 19.858 0.993 0.328 -0.255 C6 G3M 7 G3M C5 C7 C 0 1 N N N 9.931 7.681 20.266 -0.198 -0.400 0.373 C5 G3M 8 G3M N8 N1 N 0 1 N N N 8.713 10.823 21.258 3.435 0.396 -0.359 N8 G3M 9 G3M O10 O2 O 0 1 N Y N 12.881 6.407 20.632 -4.474 1.127 0.531 O10 G3M 10 G3M N11 N2 N 0 1 N N N 11.682 6.013 17.295 -2.598 -1.959 -0.081 N11 G3M 11 G3M O12 O3 O 0 1 N N N 9.517 5.511 19.316 -1.589 1.576 0.347 O12 G3M 12 G3M N13 N3 N 0 1 N N N 7.133 12.008 22.574 4.920 -0.989 0.762 N13 G3M 13 G3M N14 N4 N 0 1 N N N 9.049 11.056 23.480 5.787 0.654 -0.627 N14 G3M 14 G3M H1 H1 H 0 1 N N N 12.035 7.634 18.595 -2.677 -0.570 1.493 H1 G3M 15 G3M H2 H2 H 0 1 N N N 9.595 7.255 18.201 -1.513 0.225 -1.214 H2 G3M 16 G3M H3 H3 H 0 1 N N N 10.044 9.402 21.976 2.349 -0.216 1.327 H3 G3M 17 G3M H4 H4 H 0 1 N N N 10.770 10.726 21.003 2.322 -1.353 -0.042 H4 G3M 18 G3M H5 H5 H 0 1 N N N 10.763 9.375 19.229 0.966 1.380 0.029 H5 G3M 19 G3M H6 H6 H 0 1 N N N 8.968 9.342 19.289 0.939 0.244 -1.340 H6 G3M 20 G3M H7 H7 H 0 1 N N N 8.986 7.418 20.763 -0.144 -0.315 1.458 H7 G3M 21 G3M H8 H8 H 0 1 N N N 10.768 7.523 20.962 -0.171 -1.452 0.089 H8 G3M 22 G3M H9 H9 H 0 1 N N N 8.147 11.029 20.460 3.285 1.135 -0.969 H9 G3M 23 G3M H10 H10 H 0 1 N N N 13.368 5.783 21.158 -5.299 1.489 0.181 H10 G3M 24 G3M H11 H11 H 0 1 N N N 12.642 5.911 17.036 -2.609 -1.990 -1.090 H11 G3M 25 G3M H12 H12 H 0 1 N N N 11.243 5.115 17.308 -1.778 -2.417 0.286 H12 G3M 26 G3M H14 H14 H 0 1 N N N 8.608 5.636 19.560 -1.583 1.656 1.311 H14 G3M 27 G3M H15 H15 H 0 1 N N N 6.957 12.289 23.517 5.825 -1.269 0.971 H15 G3M 28 G3M H16 H16 H 0 1 N N N 8.755 11.397 24.373 6.692 0.374 -0.417 H16 G3M 29 G3M H17 H17 H 0 1 N N N 9.902 10.541 23.397 5.637 1.393 -1.237 H17 G3M 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal G3M N11 C3 SING N N 1 G3M C3 C4 SING N N 2 G3M C3 C2 SING N N 3 G3M C4 O12 SING N N 4 G3M C4 C5 SING N N 5 G3M O1 C2 DOUB N N 6 G3M C2 O10 SING N N 7 G3M C6 C5 SING N N 8 G3M C6 C7 SING N N 9 G3M C7 N8 SING N N 10 G3M N8 C9 SING N N 11 G3M C9 N13 DOUB N N 12 G3M C9 N14 SING N N 13 G3M C3 H1 SING N N 14 G3M C4 H2 SING N N 15 G3M C7 H3 SING N N 16 G3M C7 H4 SING N N 17 G3M C6 H5 SING N N 18 G3M C6 H6 SING N N 19 G3M C5 H7 SING N N 20 G3M C5 H8 SING N N 21 G3M N8 H9 SING N N 22 G3M O10 H10 SING N N 23 G3M N11 H11 SING N N 24 G3M N11 H12 SING N N 25 G3M O12 H14 SING N N 26 G3M N13 H15 SING N N 27 G3M N14 H16 SING N N 28 G3M N14 H17 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor G3M SMILES ACDLabs 12.01 "O=C(O)C(C(O)CCCNC(=N)\N)N" G3M InChI InChI 1.03 "InChI=1S/C7H16N4O3/c8-5(6(13)14)4(12)2-1-3-11-7(9)10/h4-5,12H,1-3,8H2,(H,13,14)(H4,9,10,11)/t4-,5-/m0/s1" G3M InChIKey InChI 1.03 ZMNNJGSTNCXCMN-WHFBIAKZSA-N G3M SMILES_CANONICAL CACTVS 3.385 "N[C@@H]([C@@H](O)CCCNC(N)=N)C(O)=O" G3M SMILES CACTVS 3.385 "N[CH]([CH](O)CCCNC(N)=N)C(O)=O" G3M SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "[H]/N=C(/N)\NCCC[C@@H]([C@@H](C(=O)O)N)O" G3M SMILES "OpenEye OEToolkits" 2.0.6 "C(CC(C(C(=O)O)N)O)CNC(=N)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier G3M "SYSTEMATIC NAME" ACDLabs 12.01 "(3S)-N~6~-carbamimidoyl-3-hydroxy-L-lysine" G3M "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S},3~{S})-2-azanyl-6-carbamimidamido-3-oxidanyl-hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site G3M "Create component" 2018-05-03 RCSB G3M "Initial release" 2018-05-16 RCSB #