data_G4S # _chem_comp.id G4S _chem_comp.name 4-O-sulfo-beta-D-galactopyranose _chem_comp.type "D-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O9 S" _chem_comp.mon_nstd_parent_comp_id GAL _chem_comp.pdbx_synonyms "4-O-sulfo-beta-D-galactose; 4-O-sulfo-D-galactose; 4-O-sulfo-galactose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces GSA _chem_comp.formula_weight 260.219 _chem_comp.one_letter_code ? _chem_comp.three_letter_code G4S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1CAR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 G4S 4-O-sulfo-beta-D-galactose PDB ? 2 G4S 4-O-sulfo-D-galactose PDB ? 3 G4S 4-O-sulfo-galactose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal G4S C1 C1 C 0 1 N N R -1.598 -0.549 10.970 1.937 -1.132 -3.170 C1 G4S 1 G4S C2 C2 C 0 1 N N R -1.932 -0.742 9.493 1.068 0.121 -3.303 C2 G4S 2 G4S C3 C3 C 0 1 N N R -2.116 0.604 8.808 0.723 0.689 -1.927 C3 G4S 3 G4S C4 C4 C 0 1 N N R -3.131 1.449 9.565 0.163 -0.397 -1.008 C4 G4S 4 G4S C5 C5 C 0 1 N N R -2.754 1.529 11.039 1.120 -1.593 -0.976 C5 G4S 5 G4S C6 C6 C 0 1 N N N -3.787 2.263 11.868 0.595 -2.752 -0.136 C6 G4S 6 G4S O1 O1 O 0 1 N Y N -1.573 -1.795 11.581 2.160 -1.713 -4.455 O1 G4S 7 G4S O2 O2 O 0 1 N N N -0.895 -1.491 8.872 1.795 1.097 -4.048 O2 G4S 8 G4S O3 O3 O 0 1 N N N -2.562 0.402 7.463 -0.222 1.745 -2.078 O3 G4S 9 G4S O4 O4 O 0 1 N N N -4.433 0.876 9.459 -1.112 -0.803 -1.510 O4 G4S 10 G4S O5 O5 O 0 1 N N N -2.635 0.210 11.594 1.327 -2.088 -2.305 O5 G4S 11 G4S O6 O6 O 0 1 N N N -3.446 2.240 13.254 1.540 -3.806 -0.178 O6 G4S 12 G4S S S S 0 1 N N N -5.576 1.835 8.880 -2.312 0.294 -1.640 S G4S 13 G4S O7 O7 O 0 1 N N N -6.876 1.339 9.286 -2.565 0.816 -0.309 O7 G4S 14 G4S O8 O8 O 0 1 N N N -5.500 1.858 7.432 -2.011 1.200 -2.733 O8 G4S 15 G4S O9 O9 O 0 1 N N N -5.389 3.177 9.395 -3.606 -0.600 -2.071 O9 G4S 16 G4S H1 H1 H 0 1 N N N -0.617 -0.027 11.065 2.930 -0.878 -2.777 H1 G4S 17 G4S H2 H2 H 0 1 N N N -2.890 -1.303 9.399 0.154 -0.098 -3.868 H2 G4S 18 G4S H3 H3 H 0 1 N N N -1.138 1.140 8.799 1.624 1.130 -1.481 H3 G4S 19 G4S H4 H4 H 0 1 N N N -3.132 2.470 9.117 0.001 0.011 -0.004 H4 G4S 20 G4S H5 H5 H 0 1 N N N -1.787 2.084 11.077 2.088 -1.283 -0.563 H5 G4S 21 G4S H61 H61 H 0 1 N N N -3.943 3.304 11.501 -0.355 -3.105 -0.539 H61 G4S 22 G4S H62 H62 H 0 1 N N N -4.813 1.864 11.691 0.458 -2.432 0.898 H62 G4S 23 G4S HO1 HO1 H 0 1 N Y N -1.365 -1.674 12.500 2.919 -2.307 -4.359 HO1 G4S 24 G4S HO2 HO2 H 0 1 N Y N -1.102 -1.611 7.952 2.350 0.608 -4.674 HO2 G4S 25 G4S HO3 HO3 H 0 1 N Y N -2.676 1.242 7.035 -0.080 2.119 -2.962 HO3 G4S 26 G4S HO6 HO6 H 0 1 N Y N -4.094 2.700 13.774 2.214 -3.558 -0.833 HO6 G4S 27 G4S HO4 HO4 H 0 1 N N N -5.348 3.150 10.344 -3.480 -1.184 -2.855 HO4 G4S 28 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal G4S C1 C2 SING N N 1 G4S C1 O1 SING N N 2 G4S C1 O5 SING N N 3 G4S C1 H1 SING N N 4 G4S C2 C3 SING N N 5 G4S C2 O2 SING N N 6 G4S C2 H2 SING N N 7 G4S C3 C4 SING N N 8 G4S C3 O3 SING N N 9 G4S C3 H3 SING N N 10 G4S C4 C5 SING N N 11 G4S C4 O4 SING N N 12 G4S C4 H4 SING N N 13 G4S C5 C6 SING N N 14 G4S C5 O5 SING N N 15 G4S C5 H5 SING N N 16 G4S C6 O6 SING N N 17 G4S C6 H61 SING N N 18 G4S C6 H62 SING N N 19 G4S O1 HO1 SING N N 20 G4S O2 HO2 SING N N 21 G4S O3 HO3 SING N N 22 G4S O4 S SING N N 23 G4S O6 HO6 SING N N 24 G4S S O7 DOUB N N 25 G4S S O8 DOUB N N 26 G4S S O9 SING N N 27 G4S HO4 O9 SING N N 28 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor G4S SMILES ACDLabs 10.04 "O=S(=O)(O)OC1C(OC(O)C(O)C1O)CO" G4S SMILES_CANONICAL CACTVS 3.341 "OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O[S](O)(=O)=O" G4S SMILES CACTVS 3.341 "OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O[S](O)(=O)=O" G4S SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)O)OS(=O)(=O)O)O" G4S SMILES "OpenEye OEToolkits" 1.5.0 "C(C1C(C(C(C(O1)O)O)O)OS(=O)(=O)O)O" G4S InChI InChI 1.03 "InChI=1S/C6H12O9S/c7-1-2-5(15-16(11,12)13)3(8)4(9)6(10)14-2/h2-10H,1H2,(H,11,12,13)/t2-,3-,4-,5+,6-/m1/s1" G4S InChIKey InChI 1.03 LOTQRUGOUKUSEY-DGPNFKTASA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier G4S "SYSTEMATIC NAME" ACDLabs 10.04 4-O-sulfo-beta-D-galactopyranose G4S "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3R,4R,5R,6R)-4,5,6-trihydroxy-2-(hydroxymethyl)oxan-3-yl] hydrogen sulfate" G4S "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 DGalp[4S]b G4S "COMMON NAME" GMML 1.0 4-sulfo-b-D-galactopyranose G4S "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-D-Galp4SO3 # _pdbx_chem_comp_related.comp_id G4S _pdbx_chem_comp_related.related_comp_id GAL _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 G4S C1 GAL C1 "Carbohydrate core" 2 G4S C2 GAL C2 "Carbohydrate core" 3 G4S C3 GAL C3 "Carbohydrate core" 4 G4S C4 GAL C4 "Carbohydrate core" 5 G4S C5 GAL C5 "Carbohydrate core" 6 G4S C6 GAL C6 "Carbohydrate core" 7 G4S O1 GAL O1 "Carbohydrate core" 8 G4S O2 GAL O2 "Carbohydrate core" 9 G4S O3 GAL O3 "Carbohydrate core" 10 G4S O4 GAL O4 "Carbohydrate core" 11 G4S O5 GAL O5 "Carbohydrate core" 12 G4S O6 GAL O6 "Carbohydrate core" 13 G4S H1 GAL H1 "Carbohydrate core" 14 G4S H2 GAL H2 "Carbohydrate core" 15 G4S H3 GAL H3 "Carbohydrate core" 16 G4S H4 GAL H4 "Carbohydrate core" 17 G4S H5 GAL H5 "Carbohydrate core" 18 G4S H61 GAL H61 "Carbohydrate core" 19 G4S H62 GAL H62 "Carbohydrate core" 20 G4S HO1 GAL HO1 "Carbohydrate core" 21 G4S HO2 GAL HO2 "Carbohydrate core" 22 G4S HO3 GAL HO3 "Carbohydrate core" 23 G4S HO6 GAL HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support G4S "CARBOHYDRATE ISOMER" D PDB ? G4S "CARBOHYDRATE RING" pyranose PDB ? G4S "CARBOHYDRATE ANOMER" beta PDB ? G4S "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site G4S "Create component" 1999-07-08 RCSB G4S "Modify descriptor" 2011-06-04 RCSB G4S "Other modification" 2020-07-03 RCSB G4S "Modify parent residue" 2020-07-17 RCSB G4S "Modify synonyms" 2020-07-17 RCSB G4S "Modify linking type" 2020-07-17 RCSB G4S "Modify leaving atom flag" 2020-07-17 RCSB ##