data_G5A # _chem_comp.id G5A _chem_comp.name "5'-O-(glycylsulfamoyl)adenosine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H17 N7 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-08-03 _chem_comp.pdbx_modified_date 2013-06-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 403.371 _chem_comp.one_letter_code ? _chem_comp.three_letter_code G5A _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3HXV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal G5A C C C 0 1 N N N 24.391 48.461 20.414 -3.520 2.069 0.230 C G5A 1 G5A N N N 0 1 N N N 23.543 49.151 18.197 -2.712 4.359 0.319 N G5A 2 G5A O O O 0 1 N N N 24.185 47.297 20.100 -3.254 2.127 -0.951 O G5A 3 G5A S S S 0 1 N N N 25.507 47.767 22.597 -4.312 -0.371 -0.226 S G5A 4 G5A N1 N1 N 0 1 Y N N 23.651 40.453 27.498 6.119 0.774 -0.340 N1 G5A 5 G5A C2 C2 C 0 1 Y N N 22.786 41.324 28.040 5.741 -0.458 -0.630 C2 G5A 6 G5A N3 N3 N 0 1 Y N N 22.702 42.600 27.632 4.480 -0.834 -0.608 N3 G5A 7 G5A C4 C4 C 0 1 Y N N 23.506 43.056 26.643 3.521 0.029 -0.286 C4 G5A 8 G5A C5 C5 C 0 1 Y N N 24.449 42.175 26.027 3.872 1.352 0.031 C5 G5A 9 G5A C6 C6 C 0 1 Y N N 24.496 40.818 26.507 5.232 1.706 -0.007 C6 G5A 10 G5A N6 N6 N 0 1 N N N 25.355 39.917 25.978 5.637 2.994 0.295 N6 G5A 11 G5A N7 N7 N 0 1 Y N N 25.097 42.893 25.084 2.724 2.012 0.317 N7 G5A 12 G5A C8 C8 C 0 1 Y N N 24.593 44.156 25.110 1.715 1.198 0.199 C8 G5A 13 G5A N9 N9 N 0 1 Y N N 23.637 44.242 26.053 2.156 -0.038 -0.171 N9 G5A 14 G5A CA CA C 0 1 N N N 24.026 49.604 19.486 -3.276 3.263 1.117 CA G5A 15 G5A "C1'" C1* C 0 1 N N R 22.808 45.420 26.412 1.323 -1.221 -0.405 "C1'" G5A 16 G5A O1S O1S O 0 1 N N N 26.255 46.735 22.002 -4.821 -1.398 0.614 O1S G5A 17 G5A "C2'" C2* C 0 1 N N R 23.550 46.499 27.126 1.251 -2.098 0.871 "C2'" G5A 18 G5A "O2'" O2* O 0 1 N N N 22.754 47.072 28.139 2.352 -3.006 0.928 "O2'" G5A 19 G5A O2S O2S O 0 1 N N N 26.100 48.351 23.742 -5.007 0.116 -1.366 O2S G5A 20 G5A "C3'" C3* C 0 1 N N S 23.952 47.550 26.176 -0.082 -2.858 0.666 "C3'" G5A 21 G5A "O3'" O3* O 0 1 N N N 24.356 48.819 26.597 0.162 -4.159 0.128 "O3'" G5A 22 G5A N3S N3S N 0 1 N N N 24.949 48.827 21.566 -4.038 0.938 0.750 N3S G5A 23 G5A "C4'" C4* C 0 1 N N R 22.921 47.323 25.085 -0.859 -1.993 -0.345 "C4'" G5A 24 G5A "O4'" O4* O 0 1 N N N 22.310 46.049 25.230 -0.051 -0.839 -0.630 "O4'" G5A 25 G5A "C5'" C5* C 0 1 N N N 23.150 47.839 23.703 -2.194 -1.557 0.261 "C5'" G5A 26 G5A "O5'" O5* O 0 1 N N N 24.188 47.033 23.164 -2.957 -0.855 -0.723 "O5'" G5A 27 G5A HN HN H 0 1 N N N 23.318 49.942 17.628 -3.312 4.585 -0.460 HN G5A 28 G5A HNA HNA H 0 1 N N N 24.252 48.608 17.747 -2.539 5.171 0.891 HNA G5A 29 G5A H2 H2 H 0 1 N N N 22.134 40.986 28.832 6.495 -1.184 -0.896 H2 G5A 30 G5A HN6 HN6 H 0 1 N N N 25.234 39.034 26.432 4.980 3.665 0.536 HN6 G5A 31 G5A HN6A HN6A H 0 0 N N N 25.172 39.817 25.000 6.578 3.226 0.265 HN6A G5A 32 G5A H8 H8 H 0 1 N N N 24.912 44.966 24.471 0.682 1.462 0.369 H8 G5A 33 G5A HA HA H 0 1 N N N 24.924 50.218 19.323 -4.219 3.584 1.561 HA G5A 34 G5A HAA HAA H 0 1 N N N 23.233 50.198 19.964 -2.577 2.991 1.908 HAA G5A 35 G5A "H1'" H1* H 0 1 N N N 22.024 45.010 27.066 1.706 -1.798 -1.247 "H1'" G5A 36 G5A "H2'" H2* H 0 1 N N N 24.443 46.050 27.585 1.213 -1.479 1.767 "H2'" G5A 37 G5A "HO2'" HO2* H 0 0 N N N 23.245 47.755 28.580 2.351 -3.577 1.709 "HO2'" G5A 38 G5A HN3S HN3S H 0 0 N N N 25.017 49.800 21.785 -4.251 0.891 1.695 HN3S G5A 39 G5A "H4'" H4* H 0 1 N N N 22.156 48.087 25.285 -1.032 -2.559 -1.260 "H4'" G5A 40 G5A "H5'" H5* H 0 1 N N N 22.235 47.755 23.098 -2.748 -2.436 0.591 "H5'" G5A 41 G5A "H5'A" H5*A H 0 0 N N N 23.449 48.897 23.725 -2.010 -0.902 1.113 "H5'A" G5A 42 G5A H16 H16 H 0 1 N N N 24.990 47.479 25.819 -0.628 -2.931 1.607 H16 G5A 43 G5A H17 H17 H 0 1 N N N 24.573 49.350 25.840 0.697 -4.727 0.699 H17 G5A 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal G5A C N3S SING N N 1 G5A N CA SING N N 2 G5A N HN SING N N 3 G5A N HNA SING N N 4 G5A O C DOUB N N 5 G5A S "O5'" SING N N 6 G5A S O2S DOUB N N 7 G5A N1 C2 SING Y N 8 G5A C2 H2 SING N N 9 G5A N3 C2 DOUB Y N 10 G5A C4 N3 SING Y N 11 G5A C5 C4 DOUB Y N 12 G5A C5 C6 SING Y N 13 G5A C6 N1 DOUB Y N 14 G5A N6 C6 SING N N 15 G5A N6 HN6 SING N N 16 G5A N6 HN6A SING N N 17 G5A N7 C5 SING Y N 18 G5A N7 C8 DOUB Y N 19 G5A C8 N9 SING Y N 20 G5A C8 H8 SING N N 21 G5A N9 C4 SING Y N 22 G5A N9 "C1'" SING N N 23 G5A CA C SING N N 24 G5A CA HA SING N N 25 G5A CA HAA SING N N 26 G5A "C1'" "C2'" SING N N 27 G5A "C1'" "H1'" SING N N 28 G5A O1S S DOUB N N 29 G5A "C2'" "O2'" SING N N 30 G5A "C2'" "H2'" SING N N 31 G5A "O2'" "HO2'" SING N N 32 G5A "C3'" "C2'" SING N N 33 G5A "C3'" "O3'" SING N N 34 G5A N3S S SING N N 35 G5A N3S HN3S SING N N 36 G5A "C4'" "C3'" SING N N 37 G5A "C4'" "O4'" SING N N 38 G5A "C4'" "H4'" SING N N 39 G5A "O4'" "C1'" SING N N 40 G5A "C5'" "C4'" SING N N 41 G5A "C5'" "H5'" SING N N 42 G5A "C5'" "H5'A" SING N N 43 G5A "O5'" "C5'" SING N N 44 G5A "C3'" H16 SING N N 45 G5A "O3'" H17 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor G5A SMILES ACDLabs 11.02 "O=C(NS(=O)(=O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O)CN" G5A SMILES_CANONICAL CACTVS 3.352 "NCC(=O)N[S](=O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23" G5A SMILES CACTVS 3.352 "NCC(=O)N[S](=O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23" G5A SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COS(=O)(=O)NC(=O)CN)O)O)N" G5A SMILES "OpenEye OEToolkits" 1.7.0 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COS(=O)(=O)NC(=O)CN)O)O)N" G5A InChI InChI 1.03 "InChI=1S/C12H17N7O7S/c13-1-6(20)18-27(23,24)25-2-5-8(21)9(22)12(26-5)19-4-17-7-10(14)15-3-16-11(7)19/h3-5,8-9,12,21-22H,1-2,13H2,(H,18,20)(H2,14,15,16)/t5-,8-,9-,12-/m1/s1" G5A InChIKey InChI 1.03 AMWPZASLDLLQFT-JJNLEZRASA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier G5A "SYSTEMATIC NAME" ACDLabs 11.02 "5'-O-(glycylsulfamoyl)adenosine" G5A "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl N-(2-azanylethanoyl)sulfamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site G5A "Create component" 2009-08-03 RCSB G5A "Modify descriptor" 2011-06-04 RCSB G5A "Modify atom id" 2013-06-07 RCSB #