data_G5R # _chem_comp.id G5R _chem_comp.name "1-(cyclopentylmethyl)-1-[3-methoxy-4-(2-morpholin-4-ylethoxy)phenyl]-3-[3-(5-methylimidazol-1-yl)propyl]urea" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H41 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-07-28 _chem_comp.pdbx_modified_date 2021-12-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 499.646 _chem_comp.one_letter_code ? _chem_comp.three_letter_code G5R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7CM0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal G5R C01 C1 C 0 1 N N N 45.591 -29.699 1.017 1.967 3.594 -0.184 C01 G5R 1 G5R C03 C2 C 0 1 Y N N 46.382 -28.241 2.755 2.444 1.332 -0.742 C03 G5R 2 G5R C04 C3 C 0 1 Y N N 46.741 -28.940 3.926 1.078 1.109 -0.763 C04 G5R 3 G5R C05 C4 C 0 1 Y N N 46.552 -28.351 5.143 0.588 -0.156 -1.060 C05 G5R 4 G5R C07 C5 C 0 1 N N N 48.268 -29.498 6.848 -1.318 -1.672 -1.544 C07 G5R 5 G5R C08 C6 C 0 1 N N N 49.158 -28.284 7.172 -1.297 -2.674 -0.388 C08 G5R 6 G5R C09 C7 C 0 1 N N N 48.316 -27.061 7.818 -1.726 -4.073 -0.879 C09 G5R 7 G5R C10 C8 C 0 1 N N N 48.904 -25.724 7.143 -2.570 -4.694 0.248 C10 G5R 8 G5R C11 C9 C 0 1 N N N 49.971 -26.127 6.381 -2.625 -3.652 1.384 C11 G5R 9 G5R C12 C10 C 0 1 N N N 49.702 -27.755 6.038 -2.362 -2.301 0.673 C12 G5R 10 G5R C13 C11 C 0 1 N N N 45.772 -29.361 7.305 -1.644 0.582 -0.679 C13 G5R 11 G5R C15 C12 C 0 1 N N N 44.625 -30.276 9.391 -3.877 1.345 -0.073 C15 G5R 12 G5R C16 C13 C 0 1 N N N 43.470 -30.724 8.471 -5.312 0.816 -0.115 C16 G5R 13 G5R C17 C14 C 0 1 N N N 42.212 -31.167 9.292 -6.262 1.872 0.452 C17 G5R 14 G5R C19 C15 C 0 1 Y N N 39.847 -30.624 8.512 -8.544 1.587 -0.564 C19 G5R 15 G5R C21 C16 C 0 1 Y N N 39.596 -32.155 6.893 -9.495 0.347 0.925 C21 G5R 16 G5R C22 C17 C 0 1 Y N N 40.880 -32.300 7.450 -8.239 0.576 1.354 C22 G5R 17 G5R C23 C18 C 0 1 N N N 41.972 -33.315 7.067 -7.617 0.064 2.628 C23 G5R 18 G5R C25 C19 C 0 1 Y N N 45.980 -27.063 5.238 1.466 -1.195 -1.334 C25 G5R 19 G5R C26 C20 C 0 1 Y N N 45.625 -26.369 4.095 2.831 -0.972 -1.313 C26 G5R 20 G5R C27 C21 C 0 1 Y N N 45.830 -26.948 2.877 3.323 0.289 -1.018 C27 G5R 21 G5R C29 C22 C 0 1 N N N 44.026 -26.533 1.469 5.509 -0.610 -1.289 C29 G5R 22 G5R C30 C23 C 0 1 N N N 43.200 -25.184 1.456 6.974 -0.175 -1.218 C30 G5R 23 G5R C32 C24 C 0 1 N N N 41.093 -24.605 1.085 7.247 -0.951 1.060 C32 G5R 24 G5R C33 C25 C 0 1 N N N 39.984 -24.463 -0.049 7.537 -0.496 2.493 C33 G5R 25 G5R C35 C26 C 0 1 N N N 41.488 -25.040 -1.742 8.901 1.292 1.669 C35 G5R 26 G5R C36 C27 C 0 1 N N N 42.616 -24.649 -0.636 8.624 0.855 0.226 C36 G5R 27 G5R N06 N1 N 0 1 N N N 46.898 -29.084 6.449 -0.795 -0.384 -1.082 N06 G5R 28 G5R N14 N2 N 0 1 N N N 45.903 -30.008 8.515 -2.967 0.334 -0.616 N14 G5R 29 G5R N18 N3 N 0 1 Y N N 41.004 -31.347 8.435 -7.636 1.365 0.411 N18 G5R 30 G5R N20 N4 N 0 1 Y N N 38.959 -31.136 7.546 -9.654 0.977 -0.248 N20 G5R 31 G5R N31 N5 N 0 1 N N N 42.277 -25.224 0.574 7.304 0.210 0.161 N31 G5R 32 G5R O02 O1 O 0 1 N N N 46.600 -28.864 1.388 2.927 2.571 -0.457 O02 G5R 33 G5R O24 O2 O 0 1 N N N 44.714 -28.986 6.925 -1.215 1.678 -0.371 O24 G5R 34 G5R O28 O3 O 0 1 N N N 45.434 -26.216 1.729 4.666 0.506 -0.997 O28 G5R 35 G5R O34 O4 O 0 1 N N N 40.259 -25.336 -1.123 8.810 0.155 2.532 O34 G5R 36 G5R H011 H1 H 0 0 N N N 45.807 -30.117 0.022 2.484 4.530 0.028 H011 G5R 37 G5R H012 H2 H 0 0 N N N 45.505 -30.517 1.747 1.319 3.725 -1.050 H012 G5R 38 G5R H013 H3 H 0 0 N N N 44.645 -29.138 0.982 1.367 3.308 0.680 H013 G5R 39 G5R H041 H4 H 0 0 N N N 47.162 -29.933 3.861 0.395 1.917 -0.549 H041 G5R 40 G5R H071 H5 H 0 0 N N N 48.201 -30.139 7.739 -0.698 -2.045 -2.359 H071 G5R 41 G5R H072 H6 H 0 0 N N N 48.724 -30.064 6.022 -2.342 -1.544 -1.895 H072 G5R 42 G5R H081 H7 H 0 0 N N N 49.932 -28.586 7.893 -0.305 -2.716 0.062 H081 G5R 43 G5R H092 H8 H 0 0 N N N 48.455 -27.033 8.909 -2.323 -3.983 -1.787 H092 G5R 44 G5R H091 H9 H 0 0 N N N 47.246 -27.168 7.588 -0.846 -4.688 -1.070 H091 G5R 45 G5R H101 H10 H 0 0 N N N 49.233 -25.016 7.918 -3.577 -4.906 -0.113 H101 G5R 46 G5R H102 H11 H 0 0 N N N 48.141 -25.247 6.511 -2.101 -5.611 0.604 H102 G5R 47 G5R H111 H12 H 0 0 N N N 50.910 -26.004 6.941 -3.608 -3.651 1.853 H111 G5R 48 G5R H112 H13 H 0 0 N N N 50.020 -25.542 5.450 -1.850 -3.853 2.123 H112 G5R 49 G5R H122 H14 H 0 0 N N N 49.005 -27.859 5.193 -1.968 -1.566 1.374 H122 G5R 50 G5R H121 H15 H 0 0 N N N 50.650 -28.258 5.796 -3.270 -1.933 0.195 H121 G5R 51 G5R H152 H16 H 0 0 N N N 44.340 -29.354 9.919 -3.808 2.255 -0.670 H152 G5R 52 G5R H151 H17 H 0 0 N N N 44.840 -31.067 10.125 -3.602 1.566 0.958 H151 G5R 53 G5R H162 H18 H 0 0 N N N 43.811 -31.571 7.857 -5.587 0.595 -1.147 H162 G5R 54 G5R H161 H19 H 0 0 N N N 43.191 -29.886 7.816 -5.381 -0.094 0.482 H161 G5R 55 G5R H171 H20 H 0 0 N N N 41.996 -30.398 10.049 -5.987 2.092 1.483 H171 G5R 56 G5R H172 H21 H 0 0 N N N 42.435 -32.121 9.792 -6.193 2.781 -0.145 H172 G5R 57 G5R H191 H22 H 0 0 N N N 39.649 -29.808 9.191 -8.380 2.175 -1.454 H191 G5R 58 G5R H211 H23 H 0 0 N N N 39.184 -32.746 6.088 -10.242 -0.242 1.435 H211 G5R 59 G5R H231 H24 H 0 0 N N N 42.611 -32.888 6.280 -7.145 -0.900 2.439 H231 G5R 60 G5R H232 H25 H 0 0 N N N 42.585 -33.545 7.951 -6.868 0.774 2.977 H232 G5R 61 G5R H233 H26 H 0 0 N N N 41.501 -34.238 6.697 -8.390 -0.052 3.388 H233 G5R 62 G5R H251 H27 H 0 0 N N N 45.819 -26.617 6.208 1.084 -2.178 -1.564 H251 G5R 63 G5R H261 H28 H 0 0 N N N 45.192 -25.382 4.166 3.513 -1.781 -1.526 H261 G5R 64 G5R H291 H29 H 0 0 N N N 43.643 -27.195 2.260 5.288 -0.979 -2.291 H291 G5R 65 G5R H292 H30 H 0 0 N N N 43.933 -27.034 0.494 5.329 -1.402 -0.562 H292 G5R 66 G5R H301 H31 H 0 0 N N N 43.878 -24.348 1.230 7.614 -1.002 -1.528 H301 G5R 67 G5R H302 H32 H 0 0 N N N 42.746 -25.030 2.446 7.134 0.676 -1.881 H302 G5R 68 G5R H322 H33 H 0 0 N N N 41.347 -23.605 1.466 7.991 -1.686 0.754 H322 G5R 69 G5R H321 H34 H 0 0 N N N 40.692 -25.219 1.905 6.254 -1.398 1.015 H321 G5R 70 G5R H331 H35 H 0 0 N N N 39.975 -23.427 -0.418 6.763 0.198 2.818 H331 G5R 71 G5R H332 H36 H 0 0 N N N 38.999 -24.710 0.375 7.551 -1.363 3.154 H332 G5R 72 G5R H352 H37 H 0 0 N N N 41.828 -25.920 -2.307 9.902 1.719 1.734 H352 G5R 73 G5R H351 H38 H 0 0 N N N 41.350 -24.193 -2.430 8.166 2.038 1.970 H351 G5R 74 G5R H362 H39 H 0 0 N N N 43.597 -25.025 -0.961 8.636 1.727 -0.427 H362 G5R 75 G5R H361 H40 H 0 0 N N N 42.661 -23.556 -0.525 9.390 0.149 -0.094 H361 G5R 76 G5R H141 H41 H 0 0 N N N 46.803 -30.305 8.833 -3.316 -0.514 -0.931 H141 G5R 77 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal G5R C35 O34 SING N N 1 G5R C35 C36 SING N N 2 G5R O34 C33 SING N N 3 G5R C36 N31 SING N N 4 G5R C33 C32 SING N N 5 G5R N31 C32 SING N N 6 G5R N31 C30 SING N N 7 G5R C01 O02 SING N N 8 G5R O02 C03 SING N N 9 G5R C30 C29 SING N N 10 G5R C29 O28 SING N N 11 G5R O28 C27 SING N N 12 G5R C03 C27 SING Y N 13 G5R C03 C04 DOUB Y N 14 G5R C27 C26 DOUB Y N 15 G5R C04 C05 SING Y N 16 G5R C26 C25 SING Y N 17 G5R C05 C25 DOUB Y N 18 G5R C05 N06 SING N N 19 G5R C12 C11 SING N N 20 G5R C12 C08 SING N N 21 G5R C11 C10 SING N N 22 G5R N06 C07 SING N N 23 G5R N06 C13 SING N N 24 G5R C07 C08 SING N N 25 G5R C21 C22 DOUB Y N 26 G5R C21 N20 SING Y N 27 G5R O24 C13 DOUB N N 28 G5R C23 C22 SING N N 29 G5R C10 C09 SING N N 30 G5R C08 C09 SING N N 31 G5R C13 N14 SING N N 32 G5R C22 N18 SING Y N 33 G5R N20 C19 DOUB Y N 34 G5R N18 C19 SING Y N 35 G5R N18 C17 SING N N 36 G5R C16 C17 SING N N 37 G5R C16 C15 SING N N 38 G5R N14 C15 SING N N 39 G5R C01 H011 SING N N 40 G5R C01 H012 SING N N 41 G5R C01 H013 SING N N 42 G5R C04 H041 SING N N 43 G5R C07 H071 SING N N 44 G5R C07 H072 SING N N 45 G5R C08 H081 SING N N 46 G5R C09 H092 SING N N 47 G5R C09 H091 SING N N 48 G5R C10 H101 SING N N 49 G5R C10 H102 SING N N 50 G5R C11 H111 SING N N 51 G5R C11 H112 SING N N 52 G5R C12 H122 SING N N 53 G5R C12 H121 SING N N 54 G5R C15 H152 SING N N 55 G5R C15 H151 SING N N 56 G5R C16 H162 SING N N 57 G5R C16 H161 SING N N 58 G5R C17 H171 SING N N 59 G5R C17 H172 SING N N 60 G5R C19 H191 SING N N 61 G5R C21 H211 SING N N 62 G5R C23 H231 SING N N 63 G5R C23 H232 SING N N 64 G5R C23 H233 SING N N 65 G5R C25 H251 SING N N 66 G5R C26 H261 SING N N 67 G5R C29 H291 SING N N 68 G5R C29 H292 SING N N 69 G5R C30 H301 SING N N 70 G5R C30 H302 SING N N 71 G5R C32 H322 SING N N 72 G5R C32 H321 SING N N 73 G5R C33 H331 SING N N 74 G5R C33 H332 SING N N 75 G5R C35 H352 SING N N 76 G5R C35 H351 SING N N 77 G5R C36 H362 SING N N 78 G5R C36 H361 SING N N 79 G5R N14 H141 SING N N 80 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor G5R InChI InChI 1.03 "InChI=1S/C27H41N5O4/c1-22-19-28-21-31(22)11-5-10-29-27(33)32(20-23-6-3-4-7-23)24-8-9-25(26(18-24)34-2)36-17-14-30-12-15-35-16-13-30/h8-9,18-19,21,23H,3-7,10-17,20H2,1-2H3,(H,29,33)" G5R InChIKey InChI 1.03 FVTOUNXWAFKVHI-UHFFFAOYSA-N G5R SMILES_CANONICAL CACTVS 3.385 "COc1cc(ccc1OCCN2CCOCC2)N(CC3CCCC3)C(=O)NCCCn4cncc4C" G5R SMILES CACTVS 3.385 "COc1cc(ccc1OCCN2CCOCC2)N(CC3CCCC3)C(=O)NCCCn4cncc4C" G5R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cncn1CCCNC(=O)N(CC2CCCC2)c3ccc(c(c3)OC)OCCN4CCOCC4" G5R SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cncn1CCCNC(=O)N(CC2CCCC2)c3ccc(c(c3)OC)OCCN4CCOCC4" # _pdbx_chem_comp_identifier.comp_id G5R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-(cyclopentylmethyl)-1-[3-methoxy-4-(2-morpholin-4-ylethoxy)phenyl]-3-[3-(5-methylimidazol-1-yl)propyl]urea" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site G5R "Create component" 2020-07-28 PDBJ G5R "Initial release" 2021-12-22 RCSB ##