data_GAA # _chem_comp.id GAA _chem_comp.name "3-nitrophenyl alpha-D-galactopyranoside" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C12 H15 N O8" _chem_comp.mon_nstd_parent_comp_id GLA _chem_comp.pdbx_synonyms ;METANITROPHENYL-ALPHA-D-GALACTOSIDE; 3-nitrophenyl alpha-D-galactoside; 3-nitrophenyl D-galactoside; 3-nitrophenyl galactoside ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 301.249 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GAA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1EEI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 GAA METANITROPHENYL-ALPHA-D-GALACTOSIDE PDB ? 2 GAA "3-nitrophenyl alpha-D-galactoside" PDB ? 3 GAA "3-nitrophenyl D-galactoside" PDB ? 4 GAA "3-nitrophenyl galactoside" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GAA C1 C1 C 0 1 N N R 7.450 -3.541 32.523 -1.248 -0.641 0.933 C1 GAA 1 GAA C2 C2 C 0 1 N N R 6.057 -3.660 33.096 -2.598 -1.282 0.601 C2 GAA 2 GAA C3 C3 C 0 1 N N S 5.296 -2.339 32.662 -3.014 -0.864 -0.814 C3 GAA 3 GAA C4 C4 C 0 1 N N R 6.019 -1.182 33.348 -2.978 0.665 -0.904 C4 GAA 4 GAA C5 C5 C 0 1 N N R 7.449 -1.196 32.860 -1.599 1.158 -0.459 C5 GAA 5 GAA C6 C6 C 0 1 N N N 8.336 -0.117 33.433 -1.541 2.683 -0.579 C6 GAA 6 GAA C7 C7 C 0 1 Y N N 8.774 -3.444 30.487 0.924 -0.578 0.394 C7 GAA 7 GAA C8 C8 C 0 1 Y N N 9.449 -2.242 30.432 2.051 -0.733 -0.399 C8 GAA 8 GAA C9 C9 C 0 1 Y N N 10.719 -2.216 29.846 3.267 -0.235 0.026 C9 GAA 9 GAA C10 C10 C 0 1 Y N N 11.254 -3.426 29.331 3.364 0.408 1.246 C10 GAA 10 GAA C11 C11 C 0 1 Y N N 10.537 -4.634 29.404 2.243 0.558 2.042 C11 GAA 11 GAA C12 C12 C 0 1 Y N N 9.266 -4.653 29.996 1.023 0.067 1.618 C12 GAA 12 GAA N1 N1 N 1 1 N N N 11.464 -0.958 29.772 4.469 -0.394 -0.823 N1 GAA 13 GAA O1 O1 O 0 1 N N N 7.463 -3.431 31.102 -0.275 -1.063 -0.024 O1 GAA 14 GAA O2 O2 O 0 1 N N N 5.495 -4.869 32.679 -2.481 -2.704 0.667 O2 GAA 15 GAA O3 O3 O 0 1 N N N 3.894 -2.251 32.939 -4.337 -1.332 -1.083 O3 GAA 16 GAA O4 O4 O 0 1 N N N 5.949 -1.350 34.756 -3.984 1.218 -0.053 O4 GAA 17 GAA O5 O5 O 0 1 N N N 8.062 -2.450 33.170 -1.366 0.780 0.896 O5 GAA 18 GAA O6 O6 O 0 1 N N N 9.643 -0.223 32.833 -0.218 3.134 -0.279 O6 GAA 19 GAA O7 O7 O -1 1 N N N 12.604 -0.894 29.266 5.543 0.041 -0.446 O7 GAA 20 GAA O8 O8 O 0 1 N N N 10.989 0.114 30.226 4.385 -0.960 -1.898 O8 GAA 21 GAA H1 H1 H 0 1 N N N 8.027 -4.475 32.714 -0.935 -0.953 1.930 H1 GAA 22 GAA H2 H2 H 0 1 N N N 6.010 -3.714 34.208 -3.348 -0.943 1.316 H2 GAA 23 GAA H3 H3 H 0 1 N N N 5.327 -2.321 31.547 -2.321 -1.291 -1.540 H3 GAA 24 GAA H4 H4 H 0 1 N N N 5.549 -0.200 33.104 -3.159 0.975 -1.933 H4 GAA 25 GAA H5 H5 H 0 1 N N N 7.365 -1.013 31.763 -0.833 0.716 -1.096 H5 GAA 26 GAA H61 H61 H 0 1 N N N 7.896 0.901 33.318 -2.245 3.129 0.123 H61 GAA 27 GAA H62 H62 H 0 1 N N N 8.375 -0.144 34.547 -1.804 2.978 -1.594 H62 GAA 28 GAA H8 H8 H 0 1 N N N 8.987 -1.329 30.844 1.976 -1.235 -1.353 H8 GAA 29 GAA H10 H10 H 0 1 N N N 12.252 -3.427 28.862 4.316 0.793 1.579 H10 GAA 30 GAA H11 H11 H 0 1 N N N 10.970 -5.563 28.998 2.321 1.060 2.995 H11 GAA 31 GAA H12 H12 H 0 1 N N N 8.676 -5.582 30.072 0.148 0.185 2.240 H12 GAA 32 GAA HO2 HO2 H 0 1 N Y N 4.619 -4.943 33.039 -2.212 -2.921 1.571 HO2 GAA 33 GAA HO3 HO3 H 0 1 N Y N 3.437 -1.459 32.678 -4.314 -2.296 -1.003 HO3 GAA 34 GAA HO4 HO4 H 0 1 N Y N 6.398 -0.630 35.182 -4.833 0.876 -0.366 HO4 GAA 35 GAA HO6 HO6 H 0 1 N Y N 10.201 0.456 33.193 -0.225 4.097 -0.365 HO6 GAA 36 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GAA C1 C2 SING N N 1 GAA C1 O1 SING N N 2 GAA C1 O5 SING N N 3 GAA C1 H1 SING N N 4 GAA C2 C3 SING N N 5 GAA C2 O2 SING N N 6 GAA C2 H2 SING N N 7 GAA C3 C4 SING N N 8 GAA C3 O3 SING N N 9 GAA C3 H3 SING N N 10 GAA C4 C5 SING N N 11 GAA C4 O4 SING N N 12 GAA C4 H4 SING N N 13 GAA C5 C6 SING N N 14 GAA C5 O5 SING N N 15 GAA C5 H5 SING N N 16 GAA C6 O6 SING N N 17 GAA C6 H61 SING N N 18 GAA C6 H62 SING N N 19 GAA C7 C8 DOUB Y N 20 GAA C7 C12 SING Y N 21 GAA C7 O1 SING N N 22 GAA C8 C9 SING Y N 23 GAA C8 H8 SING N N 24 GAA C9 C10 DOUB Y N 25 GAA C9 N1 SING N N 26 GAA C10 C11 SING Y N 27 GAA C10 H10 SING N N 28 GAA C11 C12 DOUB Y N 29 GAA C11 H11 SING N N 30 GAA C12 H12 SING N N 31 GAA N1 O7 SING N N 32 GAA N1 O8 DOUB N N 33 GAA O2 HO2 SING N N 34 GAA O3 HO3 SING N N 35 GAA O4 HO4 SING N N 36 GAA O6 HO6 SING N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GAA SMILES ACDLabs 10.04 "[O-][N+](=O)c2cc(OC1OC(C(O)C(O)C1O)CO)ccc2" GAA SMILES_CANONICAL CACTVS 3.341 "OC[C@H]1O[C@H](Oc2cccc(c2)[N+]([O-])=O)[C@H](O)[C@@H](O)[C@H]1O" GAA SMILES CACTVS 3.341 "OC[CH]1O[CH](Oc2cccc(c2)[N+]([O-])=O)[CH](O)[CH](O)[CH]1O" GAA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(cc(c1)O[C@@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O)[N+](=O)[O-]" GAA SMILES "OpenEye OEToolkits" 1.5.0 "c1cc(cc(c1)OC2C(C(C(C(O2)CO)O)O)O)[N+](=O)[O-]" GAA InChI InChI 1.03 "InChI=1S/C12H15NO8/c14-5-8-9(15)10(16)11(17)12(21-8)20-7-3-1-2-6(4-7)13(18)19/h1-4,8-12,14-17H,5H2/t8-,9+,10+,11-,12+/m1/s1" GAA InChIKey InChI 1.03 VCCMGHVCRFMITI-IIRVCBMXSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GAA "SYSTEMATIC NAME" ACDLabs 10.04 "3-nitrophenyl alpha-D-galactopyranoside" GAA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3R,4S,5R,6R)-2-(hydroxymethyl)-6-(3-nitrophenoxy)oxane-3,4,5-triol" GAA "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 metanitrophenyl-a-D-galactoside # _pdbx_chem_comp_related.comp_id GAA _pdbx_chem_comp_related.related_comp_id GLA _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 GAA C1 GLA C1 "Carbohydrate core" 2 GAA C2 GLA C2 "Carbohydrate core" 3 GAA C3 GLA C3 "Carbohydrate core" 4 GAA C4 GLA C4 "Carbohydrate core" 5 GAA C5 GLA C5 "Carbohydrate core" 6 GAA C6 GLA C6 "Carbohydrate core" 7 GAA O1 GLA O1 "Carbohydrate core" 8 GAA O2 GLA O2 "Carbohydrate core" 9 GAA O3 GLA O3 "Carbohydrate core" 10 GAA O4 GLA O4 "Carbohydrate core" 11 GAA O5 GLA O5 "Carbohydrate core" 12 GAA O6 GLA O6 "Carbohydrate core" 13 GAA H1 GLA H1 "Carbohydrate core" 14 GAA H2 GLA H2 "Carbohydrate core" 15 GAA H3 GLA H3 "Carbohydrate core" 16 GAA H4 GLA H4 "Carbohydrate core" 17 GAA H5 GLA H5 "Carbohydrate core" 18 GAA H61 GLA H61 "Carbohydrate core" 19 GAA H62 GLA H62 "Carbohydrate core" 20 GAA HO2 GLA HO2 "Carbohydrate core" 21 GAA HO3 GLA HO3 "Carbohydrate core" 22 GAA HO4 GLA HO4 "Carbohydrate core" 23 GAA HO6 GLA HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support GAA "CARBOHYDRATE ISOMER" D PDB ? GAA "CARBOHYDRATE RING" pyranose PDB ? GAA "CARBOHYDRATE ANOMER" alpha PDB ? GAA "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GAA "Create component" 1999-07-08 RCSB GAA "Modify descriptor" 2011-06-04 RCSB GAA "Other modification" 2020-07-03 RCSB GAA "Modify parent residue" 2020-07-17 RCSB GAA "Modify name" 2020-07-17 RCSB GAA "Modify synonyms" 2020-07-17 RCSB GAA "Modify internal type" 2020-07-17 RCSB GAA "Modify linking type" 2020-07-17 RCSB GAA "Modify leaving atom flag" 2020-07-17 RCSB ##