data_GAR # _chem_comp.id GAR _chem_comp.name "GLYCINAMIDE RIBONUCLEOTIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H13 N2 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -2 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 284.160 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GAR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1EZ1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GAR C1 C1 C 0 1 N N S 23.868 39.029 25.983 0.075 -2.210 0.377 C1 GAR 1 GAR O6 O6 O 0 1 N N N 23.261 37.821 26.442 -0.150 -3.383 -0.407 O6 GAR 2 GAR C2 C2 C 0 1 N N R 24.881 38.903 24.873 1.591 -1.952 0.544 C2 GAR 3 GAR O8 O8 O 0 1 N N N 24.503 37.875 23.936 2.348 -2.959 -0.130 O8 GAR 4 GAR C3 C3 C 0 1 N N R 24.776 40.273 24.260 1.809 -0.571 -0.114 C3 GAR 5 GAR O4 O4 O 0 1 N N N 23.511 40.768 24.508 0.520 0.077 -0.053 O4 GAR 6 GAR C5 C5 C 0 1 N N R 22.796 39.899 25.350 -0.440 -0.957 -0.364 C5 GAR 7 GAR C10 C10 C 0 1 N N N 21.869 40.731 26.169 -1.828 -0.566 0.148 C10 GAR 8 GAR O12 O12 O 0 1 N N N 21.017 41.578 25.413 -2.303 0.568 -0.581 O12 GAR 9 GAR N19 N19 N 0 1 N N N 25.713 41.160 24.884 2.803 0.200 0.637 N19 GAR 10 GAR C21 C21 C 0 1 N N N 26.423 42.104 24.290 3.630 1.045 -0.011 C21 GAR 11 GAR O22 O22 O 0 1 N N N 26.353 42.280 23.082 3.550 1.168 -1.215 O22 GAR 12 GAR C23 C23 C 0 1 N N N 27.286 42.956 25.152 4.652 1.839 0.761 C23 GAR 13 GAR N24 N24 N 0 1 N N N 28.030 43.950 24.359 5.422 2.678 -0.166 N24 GAR 14 GAR P15 P15 P 0 1 N N N 19.662 42.091 26.028 -3.759 0.923 0.007 P15 GAR 15 GAR O16 O16 O 0 1 N N N 20.106 43.236 26.913 -3.624 1.376 1.500 O16 GAR 16 GAR O17 O17 O -1 1 N N N 18.814 41.057 26.742 -4.394 2.081 -0.835 O17 GAR 17 GAR O18 O18 O -1 1 N N N 18.804 42.564 24.830 -4.677 -0.345 -0.072 O18 GAR 18 GAR H1 H1 H 0 1 N N N 24.372 39.421 26.896 -0.406 -2.304 1.350 H1 GAR 19 GAR HO6 HO6 H 0 1 N N N 22.622 37.900 27.141 0.190 -4.131 0.104 HO6 GAR 20 GAR H2 H2 H 0 1 N N N 25.907 38.615 25.201 1.859 -1.917 1.600 H2 GAR 21 GAR HO8 HO8 H 0 1 N N N 25.141 37.795 23.236 3.281 -2.747 0.007 HO8 GAR 22 GAR H3 H3 H 0 1 N N N 24.981 40.201 23.166 2.126 -0.690 -1.150 H3 GAR 23 GAR H5 H5 H 0 1 N N N 22.079 39.169 24.906 -0.470 -1.136 -1.438 H5 GAR 24 GAR H101 1H10 H 0 0 N N N 21.268 40.085 26.852 -2.515 -1.401 0.009 H101 GAR 25 GAR H102 2H10 H 0 0 N N N 22.440 41.324 26.919 -1.768 -0.317 1.208 H102 GAR 26 GAR H19 H19 H 0 1 N N N 25.899 41.113 25.885 2.867 0.102 1.600 H19 GAR 27 GAR H231 1H23 H 0 0 N N N 26.697 43.441 25.965 5.326 1.156 1.279 H231 GAR 28 GAR H232 2H23 H 0 0 N N N 27.971 42.339 25.779 4.146 2.472 1.490 H232 GAR 29 GAR H241 1H24 H 0 0 N N N 28.621 44.534 24.949 6.091 3.188 0.392 H241 GAR 30 GAR H242 2H24 H 0 0 N N N 27.403 44.514 23.785 5.952 2.052 -0.752 H242 GAR 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GAR C1 O6 SING N N 1 GAR C1 C2 SING N N 2 GAR C1 C5 SING N N 3 GAR C1 H1 SING N N 4 GAR O6 HO6 SING N N 5 GAR C2 O8 SING N N 6 GAR C2 C3 SING N N 7 GAR C2 H2 SING N N 8 GAR O8 HO8 SING N N 9 GAR C3 O4 SING N N 10 GAR C3 N19 SING N N 11 GAR C3 H3 SING N N 12 GAR O4 C5 SING N N 13 GAR C5 C10 SING N N 14 GAR C5 H5 SING N N 15 GAR C10 O12 SING N N 16 GAR C10 H101 SING N N 17 GAR C10 H102 SING N N 18 GAR O12 P15 SING N N 19 GAR N19 C21 SING N N 20 GAR N19 H19 SING N N 21 GAR C21 O22 DOUB N N 22 GAR C21 C23 SING N N 23 GAR C23 N24 SING N N 24 GAR C23 H231 SING N N 25 GAR C23 H232 SING N N 26 GAR N24 H241 SING N N 27 GAR N24 H242 SING N N 28 GAR P15 O16 DOUB N N 29 GAR P15 O17 SING N N 30 GAR P15 O18 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GAR SMILES ACDLabs 10.04 "O=C(NC1OC(C(O)C1O)COP([O-])([O-])=O)CN" GAR SMILES_CANONICAL CACTVS 3.341 "NCC(=O)N[C@@H]1O[C@H](CO[P]([O-])([O-])=O)[C@@H](O)[C@H]1O" GAR SMILES CACTVS 3.341 "NCC(=O)N[CH]1O[CH](CO[P]([O-])([O-])=O)[CH](O)[CH]1O" GAR SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]1[C@H]([C@H]([C@@H](O1)NC(=O)CN)O)O)OP(=O)([O-])[O-]" GAR SMILES "OpenEye OEToolkits" 1.5.0 "C(C1C(C(C(O1)NC(=O)CN)O)O)OP(=O)([O-])[O-]" GAR InChI InChI 1.03 "InChI=1S/C7H15N2O8P/c8-1-4(10)9-7-6(12)5(11)3(17-7)2-16-18(13,14)15/h3,5-7,11-12H,1-2,8H2,(H,9,10)(H2,13,14,15)/p-2/t3-,5-,6-,7-/m1/s1" GAR InChIKey InChI 1.03 OBQMLSFOUZUIOB-SHUUEZRQSA-L # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GAR "SYSTEMATIC NAME" ACDLabs 10.04 N-glycyl-5-O-phosphonato-beta-D-ribofuranosylamine GAR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(2-aminoethanoylamino)-3,4-dihydroxy-oxolan-2-yl]methyl phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GAR "Create component" 1999-07-08 RCSB GAR "Modify descriptor" 2011-06-04 RCSB #