data_GBZ # _chem_comp.id GBZ _chem_comp.name "(2~{S})-2-[[(2~{S})-6-[2-[(6-fluoranylpyridin-3-yl)carbonylamino]ethyl-phenyl-amino]-1-oxidanyl-1,6-bis(oxidanylidene)hexan-2-yl]carbamoylamino]pentanedioic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H30 F N5 O9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-09-12 _chem_comp.pdbx_modified_date 2018-11-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 575.543 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GBZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6HKZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GBZ OBN O1 O 0 1 N N N 13.870 49.359 41.299 8.550 2.959 -3.073 OBN GBZ 1 GBZ CBA C1 C 0 1 N N N 13.956 48.127 41.049 7.693 3.372 -2.126 CBA GBZ 2 GBZ OBO O2 O 0 1 N N N 13.164 47.484 40.312 7.357 4.532 -2.080 OBO GBZ 3 GBZ CAZ C2 C 0 1 N N N 15.149 47.404 41.690 7.150 2.390 -1.121 CAZ GBZ 4 GBZ CAY C3 C 0 1 N N N 14.882 45.901 41.823 6.203 3.114 -0.161 CAY GBZ 5 GBZ CAW C4 C 0 1 N N S 16.212 45.136 42.195 5.652 2.116 0.860 CAW GBZ 6 GBZ CAX C5 C 0 1 N N N 17.214 45.249 40.994 4.817 2.849 1.878 CAX GBZ 7 GBZ OBG O3 O 0 1 N N N 17.141 44.428 40.061 3.650 2.571 2.016 OBG GBZ 8 GBZ OBF O4 O 0 1 N N N 18.021 46.201 41.034 5.371 3.812 2.632 OBF GBZ 9 GBZ NAV N1 N 0 1 N N N 16.937 45.715 43.328 4.823 1.122 0.173 NAV GBZ 10 GBZ CAU C6 C 0 1 N N N 18.148 45.258 43.703 4.645 -0.098 0.716 CAU GBZ 11 GBZ OBE O5 O 0 1 N N N 18.536 44.180 43.265 5.173 -0.375 1.776 OBE GBZ 12 GBZ N N2 N 0 1 N N N 18.866 46.051 44.550 3.883 -1.012 0.085 N GBZ 13 GBZ CA C7 C 0 1 N N S 20.143 45.697 45.235 3.690 -2.339 0.675 CA GBZ 14 GBZ C C8 C 0 1 N N N 20.295 46.421 46.597 4.836 -3.236 0.282 C GBZ 15 GBZ OXT O6 O 0 1 N N N 19.809 47.581 46.711 5.722 -2.810 -0.420 OXT GBZ 16 GBZ O O7 O 0 1 N N N 20.968 45.807 47.462 4.871 -4.507 0.711 O GBZ 17 GBZ CB C9 C 0 1 N N N 21.394 46.026 44.437 2.376 -2.938 0.167 CB GBZ 18 GBZ CAP C10 C 0 1 N N N 21.518 47.521 44.146 1.203 -2.095 0.672 CAP GBZ 19 GBZ CAO C11 C 0 1 N N N 22.706 47.687 43.144 -0.110 -2.694 0.164 CAO GBZ 20 GBZ CAN C12 C 0 1 N N N 24.069 47.690 43.930 -1.266 -1.864 0.662 CAN GBZ 21 GBZ OBB O8 O 0 1 N N N 24.037 47.464 45.125 -1.057 -0.837 1.273 OBB GBZ 22 GBZ NAM N3 N 0 1 N N N 25.277 47.880 43.292 -2.532 -2.263 0.428 NAM GBZ 23 GBZ CBJ C13 C 0 1 Y N N 25.325 47.997 41.937 -2.774 -3.500 -0.179 CBJ GBZ 24 GBZ CBH C14 C 0 1 Y N N 25.163 46.843 41.163 -3.385 -4.520 0.539 CBH GBZ 25 GBZ CBI C15 C 0 1 Y N N 25.187 46.896 39.766 -3.623 -5.740 -0.064 CBI GBZ 26 GBZ CBK C16 C 0 1 Y N N 25.372 48.119 39.125 -3.254 -5.946 -1.380 CBK GBZ 27 GBZ CBM C17 C 0 1 Y N N 25.533 49.274 39.882 -2.646 -4.933 -2.098 CBM GBZ 28 GBZ CBL C18 C 0 1 Y N N 25.509 49.211 41.281 -2.411 -3.709 -1.503 CBL GBZ 29 GBZ CAL C19 C 0 1 N N N 26.493 47.788 44.108 -3.654 -1.402 0.810 CAL GBZ 30 GBZ CAJ C20 C 0 1 N N N 27.254 49.083 44.107 -4.003 -0.473 -0.354 CAJ GBZ 31 GBZ NAI N4 N 0 1 N N N 26.701 50.087 45.058 -5.125 0.388 0.028 NAI GBZ 32 GBZ CAH C21 C 0 1 N N N 26.391 51.311 44.580 -5.608 1.293 -0.846 CAH GBZ 33 GBZ OAK O9 O 0 1 N N N 26.485 51.606 43.390 -5.112 1.395 -1.952 OAK GBZ 34 GBZ CAE C22 C 0 1 Y N N 25.985 52.324 45.436 -6.739 2.161 -0.461 CAE GBZ 35 GBZ CAD C23 C 0 1 Y N N 24.950 53.157 44.986 -7.253 3.102 -1.363 CAD GBZ 36 GBZ CAC C24 C 0 1 Y N N 24.522 54.225 45.767 -8.312 3.891 -0.955 CAC GBZ 37 GBZ CAA C25 C 0 1 Y N N 25.149 54.480 46.987 -8.828 3.727 0.322 CAA GBZ 38 GBZ FAB F1 F 0 1 N N N 24.695 55.523 47.701 -9.863 4.495 0.725 FAB GBZ 39 GBZ NAG N5 N 0 1 Y N N 26.176 53.699 47.430 -8.321 2.831 1.151 NAG GBZ 40 GBZ CAF C26 C 0 1 Y N N 26.634 52.601 46.651 -7.316 2.054 0.805 CAF GBZ 41 GBZ H1 H1 H 0 1 N N N 13.118 49.723 40.846 8.871 3.625 -3.696 H1 GBZ 42 GBZ H2 H2 H 0 1 N N N 16.040 47.556 41.062 6.607 1.601 -1.641 H2 GBZ 43 GBZ H3 H3 H 0 1 N N N 15.329 47.826 42.690 7.975 1.953 -0.557 H3 GBZ 44 GBZ H4 H4 H 0 1 N N N 14.135 45.734 42.613 6.746 3.903 0.359 H4 GBZ 45 GBZ H5 H5 H 0 1 N N N 14.497 45.515 40.867 5.378 3.550 -0.724 H5 GBZ 46 GBZ H6 H6 H 0 1 N N N 15.981 44.076 42.379 6.479 1.615 1.362 H6 GBZ 47 GBZ H7 H7 H 0 1 N N N 18.558 46.194 40.251 4.796 4.254 3.271 H7 GBZ 48 GBZ H8 H8 H 0 1 N N N 16.522 46.469 43.837 4.401 1.343 -0.672 H8 GBZ 49 GBZ H9 H9 H 0 1 N N N 18.498 46.963 44.730 3.461 -0.792 -0.761 H9 GBZ 50 GBZ H10 H10 H 0 1 N N N 20.141 44.615 45.432 3.653 -2.252 1.761 H10 GBZ 51 GBZ H11 H11 H 0 1 N N N 21.063 46.351 48.235 5.626 -5.043 0.432 H11 GBZ 52 GBZ H12 H12 H 0 1 N N N 21.358 45.481 43.482 2.377 -2.943 -0.923 H12 GBZ 53 GBZ H13 H13 H 0 1 N N N 22.275 45.703 45.011 2.276 -3.959 0.535 H13 GBZ 54 GBZ H14 H14 H 0 1 N N N 21.726 48.072 45.075 1.202 -2.090 1.762 H14 GBZ 55 GBZ H15 H15 H 0 1 N N N 20.588 47.898 43.697 1.304 -1.074 0.304 H15 GBZ 56 GBZ H16 H16 H 0 1 N N N 22.596 48.637 42.601 -0.109 -2.699 -0.926 H16 GBZ 57 GBZ H17 H17 H 0 1 N N N 22.699 46.852 42.428 -0.211 -3.715 0.532 H17 GBZ 58 GBZ H18 H18 H 0 1 N N N 25.017 45.892 41.654 -3.672 -4.360 1.567 H18 GBZ 59 GBZ H19 H19 H 0 1 N N N 25.063 45.993 39.187 -4.097 -6.534 0.494 H19 GBZ 60 GBZ H20 H20 H 0 1 N N N 25.390 48.170 38.046 -3.441 -6.901 -1.849 H20 GBZ 61 GBZ H21 H21 H 0 1 N N N 25.677 50.224 39.389 -2.358 -5.097 -3.126 H21 GBZ 62 GBZ H22 H22 H 0 1 N N N 25.635 50.115 41.858 -1.936 -2.917 -2.064 H22 GBZ 63 GBZ H23 H23 H 0 1 N N N 26.212 47.539 45.142 -4.518 -2.019 1.055 H23 GBZ 64 GBZ H24 H24 H 0 1 N N N 27.137 46.994 43.702 -3.375 -0.806 1.679 H24 GBZ 65 GBZ H25 H25 H 0 1 N N N 28.298 48.876 44.385 -3.138 0.144 -0.599 H25 GBZ 66 GBZ H26 H26 H 0 1 N N N 27.222 49.507 43.093 -4.282 -1.069 -1.223 H26 GBZ 67 GBZ H27 H27 H 0 1 N N N 26.563 49.861 46.022 -5.520 0.307 0.910 H27 GBZ 68 GBZ H28 H28 H 0 1 N N N 24.484 52.968 44.030 -6.832 3.209 -2.352 H28 GBZ 69 GBZ H29 H29 H 0 1 N N N 23.710 54.853 45.431 -8.734 4.627 -1.624 H29 GBZ 70 GBZ H30 H30 H 0 1 N N N 27.462 51.994 46.986 -6.932 1.330 1.508 H30 GBZ 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GBZ CBK CBI DOUB Y N 1 GBZ CBK CBM SING Y N 2 GBZ CBI CBH SING Y N 3 GBZ CBM CBL DOUB Y N 4 GBZ OBG CAX DOUB N N 5 GBZ OBO CBA DOUB N N 6 GBZ CAX OBF SING N N 7 GBZ CAX CAW SING N N 8 GBZ CBA OBN SING N N 9 GBZ CBA CAZ SING N N 10 GBZ CBH CBJ DOUB Y N 11 GBZ CBL CBJ SING Y N 12 GBZ CAZ CAY SING N N 13 GBZ CAY CAW SING N N 14 GBZ CBJ NAM SING N N 15 GBZ CAW NAV SING N N 16 GBZ CAO CAN SING N N 17 GBZ CAO CAP SING N N 18 GBZ OBE CAU DOUB N N 19 GBZ NAM CAN SING N N 20 GBZ NAM CAL SING N N 21 GBZ NAV CAU SING N N 22 GBZ OAK CAH DOUB N N 23 GBZ CAU N SING N N 24 GBZ CAN OBB DOUB N N 25 GBZ CAJ CAL SING N N 26 GBZ CAJ NAI SING N N 27 GBZ CAP CB SING N N 28 GBZ CB CA SING N N 29 GBZ N CA SING N N 30 GBZ CAH NAI SING N N 31 GBZ CAH CAE SING N N 32 GBZ CAD CAE DOUB Y N 33 GBZ CAD CAC SING Y N 34 GBZ CA C SING N N 35 GBZ CAE CAF SING Y N 36 GBZ CAC CAA DOUB Y N 37 GBZ C OXT DOUB N N 38 GBZ C O SING N N 39 GBZ CAF NAG DOUB Y N 40 GBZ CAA NAG SING Y N 41 GBZ CAA FAB SING N N 42 GBZ OBN H1 SING N N 43 GBZ CAZ H2 SING N N 44 GBZ CAZ H3 SING N N 45 GBZ CAY H4 SING N N 46 GBZ CAY H5 SING N N 47 GBZ CAW H6 SING N N 48 GBZ OBF H7 SING N N 49 GBZ NAV H8 SING N N 50 GBZ N H9 SING N N 51 GBZ CA H10 SING N N 52 GBZ O H11 SING N N 53 GBZ CB H12 SING N N 54 GBZ CB H13 SING N N 55 GBZ CAP H14 SING N N 56 GBZ CAP H15 SING N N 57 GBZ CAO H16 SING N N 58 GBZ CAO H17 SING N N 59 GBZ CBH H18 SING N N 60 GBZ CBI H19 SING N N 61 GBZ CBK H20 SING N N 62 GBZ CBM H21 SING N N 63 GBZ CBL H22 SING N N 64 GBZ CAL H23 SING N N 65 GBZ CAL H24 SING N N 66 GBZ CAJ H25 SING N N 67 GBZ CAJ H26 SING N N 68 GBZ NAI H27 SING N N 69 GBZ CAD H28 SING N N 70 GBZ CAC H29 SING N N 71 GBZ CAF H30 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GBZ InChI InChI 1.03 "InChI=1S/C26H30FN5O9/c27-20-11-9-16(15-29-20)23(36)28-13-14-32(17-5-2-1-3-6-17)21(33)8-4-7-18(24(37)38)30-26(41)31-19(25(39)40)10-12-22(34)35/h1-3,5-6,9,11,15,18-19H,4,7-8,10,12-14H2,(H,28,36)(H,34,35)(H,37,38)(H,39,40)(H2,30,31,41)/t18-,19-/m0/s1" GBZ InChIKey InChI 1.03 AFDHXMJDHQVEHD-OALUTQOASA-N GBZ SMILES_CANONICAL CACTVS 3.385 "OC(=O)CC[C@H](NC(=O)N[C@@H](CCCC(=O)N(CCNC(=O)c1ccc(F)nc1)c2ccccc2)C(O)=O)C(O)=O" GBZ SMILES CACTVS 3.385 "OC(=O)CC[CH](NC(=O)N[CH](CCCC(=O)N(CCNC(=O)c1ccc(F)nc1)c2ccccc2)C(O)=O)C(O)=O" GBZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)N(CCNC(=O)c2ccc(nc2)F)C(=O)CCC[C@@H](C(=O)O)NC(=O)N[C@@H](CCC(=O)O)C(=O)O" GBZ SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)N(CCNC(=O)c2ccc(nc2)F)C(=O)CCCC(C(=O)O)NC(=O)NC(CCC(=O)O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GBZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-2-[[(2~{S})-6-[2-[(6-fluoranylpyridin-3-yl)carbonylamino]ethyl-phenyl-amino]-1-oxidanyl-1,6-bis(oxidanylidene)hexan-2-yl]carbamoylamino]pentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GBZ "Create component" 2018-09-12 EBI GBZ "Initial release" 2018-12-05 RCSB #