data_GC1 # _chem_comp.id GC1 _chem_comp.name "2,6-anhydro-L-gulonic acid" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H10 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1-deoxy-D-glucuronic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-03-21 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 178.140 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GC1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye OEToolkits" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id GC1 _pdbx_chem_comp_synonyms.name "1-deoxy-D-glucuronic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GC1 O4 O4 O 0 1 N N N -8.953 3.989 3.877 0.911 -1.974 -3.027 O4 GC1 1 GC1 C1 C1 C 0 1 N N N -5.295 2.077 3.949 3.861 0.585 -1.707 C1 GC1 2 GC1 C2 C2 C 0 1 N N N -5.899 2.165 2.546 4.358 -0.609 -2.508 C2 GC1 3 GC1 C3 C3 C 0 1 N N N -7.059 3.182 2.524 3.197 -1.298 -3.222 C3 GC1 4 GC1 C4 C4 C 0 1 N N N -8.044 2.897 3.676 2.045 -1.583 -2.255 C4 GC1 5 GC1 C5 C5 C 0 1 N N N -7.285 2.757 5.008 1.706 -0.344 -1.429 C5 GC1 6 GC1 C6 C6 C 0 1 N N N -8.263 2.401 6.135 0.808 -0.688 -0.286 C6 GC1 7 GC1 O2 O2 O 0 1 N N N -4.864 2.596 1.658 5.312 -0.153 -3.461 O2 GC1 8 GC1 O3 O3 O 0 1 N N N -7.749 2.999 1.280 3.670 -2.530 -3.767 O3 GC1 9 GC1 O5 O5 O 0 1 N N N -6.305 1.725 4.886 2.859 0.185 -0.779 O5 GC1 10 GC1 O6B O6A O 0 1 N N N -8.520 3.375 7.027 -0.384 -1.152 -0.736 O6B GC1 11 GC1 O6A O6B O 0 1 N N N -8.781 1.310 6.246 1.099 -0.572 0.895 O6A GC1 12 GC1 H1A H1 H 0 1 N N N -4.869 3.053 4.223 4.690 1.030 -1.146 H1A GC1 13 GC1 H2 H2 H 0 1 N N N -6.296 1.186 2.240 4.864 -1.324 -1.850 H2 GC1 14 GC1 H3 H3 H 0 1 N N N -6.671 4.205 2.636 2.853 -0.699 -4.074 H3 GC1 15 GC1 H4 H4 H 0 1 N N N -8.580 1.977 3.398 2.304 -2.430 -1.608 H4 GC1 16 GC1 H5 H5 H 0 1 N N N -6.794 3.712 5.247 1.207 0.432 -2.022 H5 GC1 17 GC1 H1 H11 H 0 1 N N N -4.505 1.311 3.959 3.472 1.377 -2.360 H1 GC1 18 GC1 HO4 HO4 H 0 1 N Y N -9.154 4.068 4.802 1.228 -2.108 -3.932 HO4 GC1 19 GC1 HO2 HO2 H 0 1 N Y N -5.218 2.692 0.781 5.772 -0.941 -3.792 HO2 GC1 20 GC1 HO3 HO3 H 0 1 N Y N -8.685 2.959 1.439 4.445 -2.781 -3.243 HO3 GC1 21 GC1 HO6B HO6A H 0 0 N N N -9.126 3.052 7.683 -0.988 -1.385 0.001 HO6B GC1 22 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GC1 O4 C4 SING N N 1 GC1 O4 HO4 SING N N 2 GC1 C1 C2 SING N N 3 GC1 C1 H1 SING N N 4 GC1 C1 H1A SING N N 5 GC1 C1 O5 SING N N 6 GC1 C2 O2 SING N N 7 GC1 C2 H2 SING N N 8 GC1 C2 C3 SING N N 9 GC1 C3 O3 SING N N 10 GC1 C3 H3 SING N N 11 GC1 C3 C4 SING N N 12 GC1 C4 H4 SING N N 13 GC1 C4 C5 SING N N 14 GC1 C5 O5 SING N N 15 GC1 C5 H5 SING N N 16 GC1 C5 C6 SING N N 17 GC1 C6 O6A DOUB N N 18 GC1 C6 O6B SING N N 19 GC1 O2 HO2 SING N N 20 GC1 O3 HO3 SING N N 21 GC1 O6B HO6B SING N N 22 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GC1 SMILES ACDLabs 10.04 "O=C(O)C1OCC(O)C(O)C1O" GC1 SMILES_CANONICAL CACTVS 3.341 "O[C@H]1CO[C@@H]([C@@H](O)[C@@H]1O)C(O)=O" GC1 SMILES CACTVS 3.341 "O[CH]1CO[CH]([CH](O)[CH]1O)C(O)=O" GC1 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1[C@@H]([C@H]([C@@H]([C@H](O1)C(=O)O)O)O)O" GC1 SMILES "OpenEye OEToolkits" 1.5.0 "C1C(C(C(C(O1)C(=O)O)O)O)O" GC1 InChI InChI 1.03 "InChI=1S/C6H10O6/c7-2-1-12-5(6(10)11)4(9)3(2)8/h2-5,7-9H,1H2,(H,10,11)/t2-,3+,4-,5-/m0/s1" GC1 InChIKey InChI 1.03 KYIOVQZVBFQNEB-QTBDOELSSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GC1 "SYSTEMATIC NAME" ACDLabs 10.04 "2,6-anhydro-L-gulonic acid" GC1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3S,4R,5S)-3,4,5-trihydroxyoxane-2-carboxylic acid" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support GC1 "CARBOHYDRATE ISOMER" D PDB ? GC1 "CARBOHYDRATE RING" pyranose PDB ? GC1 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GC1 "Create component" 2007-03-21 RCSB GC1 "Modify descriptor" 2011-06-04 RCSB GC1 "Other modification" 2020-07-03 RCSB GC1 "Modify name" 2020-07-17 RCSB GC1 "Modify synonyms" 2020-07-17 RCSB GC1 "Modify linking type" 2020-07-17 RCSB GC1 "Modify atom id" 2020-07-17 RCSB GC1 "Modify component atom id" 2020-07-17 RCSB GC1 "Modify leaving atom flag" 2020-07-17 RCSB ##