data_GCO # _chem_comp.id GCO _chem_comp.name "D-gluconic acid" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "GLUCONIC ACID" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 196.155 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GCO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1BGG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id GCO _pdbx_chem_comp_synonyms.name "GLUCONIC ACID" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GCO C1 C1 C 0 1 N N N 35.358 82.667 58.132 -0.362 0.157 -2.895 C1 GCO 1 GCO C2 C2 C 0 1 N N R 36.519 82.145 57.697 0.321 0.635 -1.640 C2 GCO 2 GCO C3 C3 C 0 1 N N S 37.053 80.904 58.152 -0.340 -0.008 -0.421 C3 GCO 3 GCO C4 C4 C 0 1 N N R 37.489 81.016 59.588 0.354 0.477 0.852 C4 GCO 4 GCO C5 C5 C 0 1 N N R 36.726 80.009 60.378 -0.308 -0.166 2.072 C5 GCO 5 GCO C6 C6 C 0 1 N N N 37.321 79.615 61.685 0.386 0.319 3.345 C6 GCO 6 GCO O1A O11 O 0 1 N N N 35.281 83.861 57.459 0.267 -0.436 -3.738 O1A GCO 7 GCO O1B O12 O 0 1 N N N 35.683 83.153 59.283 -1.671 0.390 -3.076 O1B GCO 8 GCO O2 O2 O 0 1 N N N 36.083 81.997 56.407 1.702 0.269 -1.681 O2 GCO 9 GCO O3 O3 O 0 1 N N N 38.088 80.675 57.235 -0.227 -1.430 -0.512 O3 GCO 10 GCO O4 O4 O 0 1 N N N 38.862 80.701 59.740 1.734 0.111 0.811 O4 GCO 11 GCO O5 O5 O 0 1 N N N 35.480 80.691 60.720 -1.689 0.199 2.113 O5 GCO 12 GCO O6 O6 O 0 1 N N N 38.043 80.656 62.306 -0.232 -0.282 4.485 O6 GCO 13 GCO H2 H2 H 0 1 N N N 37.380 82.775 58.016 0.235 1.719 -1.570 H2 GCO 14 GCO H3 H3 H 0 1 N N N 36.337 80.048 58.173 -1.393 0.271 -0.389 H3 GCO 15 GCO H4 H4 H 0 1 N N N 37.309 82.062 59.928 0.267 1.561 0.922 H4 GCO 16 GCO H5 H5 H 0 1 N N N 36.663 79.080 59.763 -0.222 -1.250 2.002 H5 GCO 17 GCO H61 H61 H 0 1 N N N 36.539 79.211 62.370 0.300 1.403 3.415 H61 GCO 18 GCO H62 H62 H 0 1 N N N 37.955 78.705 61.573 1.439 0.039 3.314 H62 GCO 19 GCO HO1B HO1 H 0 0 N N N 34.863 83.521 59.590 -2.111 0.083 -3.881 HO1B GCO 20 GCO HO2 HO2 H 0 1 N N N 36.902 81.628 56.099 1.733 -0.695 -1.743 HO2 GCO 21 GCO HO3 HO3 H 0 1 N N N 38.443 79.848 57.538 0.717 -1.634 -0.537 HO3 GCO 22 GCO HO4 HO4 H 0 1 N N N 39.137 80.771 60.646 1.766 -0.853 0.749 HO4 GCO 23 GCO HO5 HO5 H 0 1 N N N 34.993 80.049 61.223 -1.720 1.164 2.174 HO5 GCO 24 GCO HO6 HO6 H 0 1 N N N 38.422 80.404 63.139 0.234 0.049 5.264 HO6 GCO 25 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GCO C1 C2 SING N N 1 GCO C1 O1A DOUB N N 2 GCO C1 O1B SING N N 3 GCO C2 C3 SING N N 4 GCO C2 O2 SING N N 5 GCO C2 H2 SING N N 6 GCO C3 C4 SING N N 7 GCO C3 O3 SING N N 8 GCO C3 H3 SING N N 9 GCO C4 C5 SING N N 10 GCO C4 O4 SING N N 11 GCO C4 H4 SING N N 12 GCO C5 C6 SING N N 13 GCO C5 O5 SING N N 14 GCO C5 H5 SING N N 15 GCO C6 O6 SING N N 16 GCO C6 H61 SING N N 17 GCO C6 H62 SING N N 18 GCO O1B HO1B SING N N 19 GCO O2 HO2 SING N N 20 GCO O3 HO3 SING N N 21 GCO O4 HO4 SING N N 22 GCO O5 HO5 SING N N 23 GCO O6 HO6 SING N N 24 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GCO SMILES ACDLabs 10.04 "O=C(O)C(O)C(O)C(O)C(O)CO" GCO SMILES_CANONICAL CACTVS 3.341 "OC[C@@H](O)[C@@H](O)[C@H](O)[C@@H](O)C(O)=O" GCO SMILES CACTVS 3.341 "OC[CH](O)[CH](O)[CH](O)[CH](O)C(O)=O" GCO SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@H]([C@H]([C@@H]([C@H](C(=O)O)O)O)O)O)O" GCO SMILES "OpenEye OEToolkits" 1.5.0 "C(C(C(C(C(C(=O)O)O)O)O)O)O" GCO InChI InChI 1.03 "InChI=1S/C6H12O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-5,7-11H,1H2,(H,12,13)/t2-,3-,4+,5-/m1/s1" GCO InChIKey InChI 1.03 RGHNJXZEOKUKBD-SQOUGZDYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GCO "SYSTEMATIC NAME" ACDLabs 10.04 "D-gluconic acid" GCO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3S,4R,5R)-2,3,4,5,6-pentahydroxyhexanoic acid" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support GCO "CARBOHYDRATE ISOMER" D PDB ? GCO "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GCO "Create component" 1999-07-08 RCSB GCO "Modify descriptor" 2011-06-04 RCSB GCO "Other modification" 2020-07-03 RCSB GCO "Modify name" 2020-07-17 RCSB GCO "Modify synonyms" 2020-07-17 RCSB GCO "Modify linking type" 2020-07-17 RCSB GCO "Modify atom id" 2020-07-17 RCSB GCO "Modify component atom id" 2020-07-17 RCSB ##