data_GDJ # _chem_comp.id GDJ _chem_comp.name "N-[4-[(2-azanyl-2-oxidanylidene-ethyl)-[4-[(2-azanyl-2-oxidanylidene-ethyl)-(4-methoxyphenyl)sulfonyl-amino]naphthalen-1-yl]sulfamoyl]phenyl]-2-(4-ethylpiperazin-1-yl)ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C35 H41 N7 O8 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-05-06 _chem_comp.pdbx_modified_date 2022-07-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 751.872 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GDJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7XM4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GDJ C10 C1 C 0 1 Y N N 44.565 3.000 15.907 1.076 1.396 -0.132 C10 GDJ 1 GDJ N12 N1 N 0 1 N N N 47.634 -0.436 13.957 1.934 -3.384 -0.484 N12 GDJ 2 GDJ C13 C2 C 0 1 N N N 47.487 5.659 16.579 3.475 2.187 2.395 C13 GDJ 3 GDJ C20 C3 C 0 1 Y N N 48.835 -0.072 11.194 -0.635 -3.970 0.311 C20 GDJ 4 GDJ C22 C4 C 0 1 Y N N 47.099 6.366 13.113 3.107 3.677 -0.854 C22 GDJ 5 GDJ C24 C5 C 0 1 Y N N 51.059 -0.376 10.353 -2.691 -4.449 -0.819 C24 GDJ 6 GDJ C26 C6 C 0 1 Y N N 49.837 1.593 9.713 -2.593 -2.685 0.811 C26 GDJ 7 GDJ C28 C7 C 0 1 Y N N 47.232 5.500 12.031 2.470 3.205 -1.986 C28 GDJ 8 GDJ C01 C8 C 0 1 Y N N 48.103 3.252 14.572 4.020 -0.638 0.815 C01 GDJ 9 GDJ C02 C9 C 0 1 Y N N 48.351 1.921 14.197 3.592 -1.910 0.443 C02 GDJ 10 GDJ C03 C10 C 0 1 Y N N 47.363 0.954 14.405 2.348 -2.101 -0.115 C03 GDJ 11 GDJ C04 C11 C 0 1 Y N N 46.073 1.325 14.964 1.493 -0.996 -0.312 C04 GDJ 12 GDJ C05 C12 C 0 1 Y N N 45.833 2.638 15.336 1.928 0.298 0.066 C05 GDJ 13 GDJ C06 C13 C 0 1 Y N N 46.865 3.615 15.151 3.209 0.460 0.635 C06 GDJ 14 GDJ C07 C14 C 0 1 Y N N 45.064 0.337 15.149 0.219 -1.156 -0.879 C07 GDJ 15 GDJ C08 C15 C 0 1 Y N N 43.822 0.694 15.708 -0.579 -0.068 -1.062 C08 GDJ 16 GDJ C09 C16 C 0 1 Y N N 43.580 2.028 16.084 -0.154 1.204 -0.684 C09 GDJ 17 GDJ C16 C17 C 0 1 N N N 48.011 -1.590 14.841 2.263 -3.906 -1.813 C16 GDJ 18 GDJ C23 C18 C 0 1 Y N N 49.977 -0.817 11.123 -1.353 -4.717 -0.605 C23 GDJ 19 GDJ C25 C19 C 0 1 Y N N 50.995 0.847 9.661 -3.315 -3.429 -0.113 C25 GDJ 20 GDJ C27 C20 C 0 1 Y N N 48.752 1.154 10.484 -1.255 -2.957 1.020 C27 GDJ 21 GDJ C29 C21 C 0 1 Y N N 48.206 5.749 11.072 1.468 3.951 -2.578 C29 GDJ 22 GDJ C30 C22 C 0 1 Y N N 49.043 6.841 11.209 1.103 5.174 -2.034 C30 GDJ 23 GDJ C31 C23 C 0 1 Y N N 48.911 7.694 12.303 1.744 5.645 -0.898 C31 GDJ 24 GDJ C32 C24 C 0 1 Y N N 47.945 7.448 13.264 2.745 4.895 -0.310 C32 GDJ 25 GDJ C34 C25 C 0 1 N N N 51.050 7.887 10.675 -0.205 7.159 -2.001 C34 GDJ 26 GDJ C36 C26 C 0 1 N N N 52.757 2.654 8.808 -5.124 -1.890 -0.242 C36 GDJ 27 GDJ C37 C27 C 0 1 N N N 53.956 2.920 7.822 -6.601 -1.609 -0.350 C37 GDJ 28 GDJ C40 C28 C 0 1 N N N 52.310 2.373 6.164 -6.495 0.320 1.110 C40 GDJ 29 GDJ C41 C29 C 0 1 N N N 51.884 1.777 4.974 -6.676 1.839 1.164 C41 GDJ 30 GDJ C43 C30 C 0 1 N N N 54.046 1.037 4.609 -8.404 1.693 -0.524 C43 GDJ 31 GDJ C44 C31 C 0 1 N N N 54.468 1.630 5.802 -8.223 0.174 -0.579 C44 GDJ 32 GDJ C45 C32 C 0 1 N N N 52.350 0.497 2.951 -8.298 3.622 0.936 C45 GDJ 33 GDJ C46 C33 C 0 1 N N N 50.918 0.002 3.031 -7.706 4.132 2.252 C46 GDJ 34 GDJ C47 C34 C 0 1 N N N 49.445 -1.555 15.422 3.630 -4.540 -1.779 C47 GDJ 35 GDJ C50 C35 C 0 1 N N N 46.952 5.400 18.000 4.603 1.663 3.246 C50 GDJ 36 GDJ N11 N2 N 0 1 N N N 46.733 5.030 15.474 3.653 1.730 1.014 N11 GDJ 37 GDJ N35 N3 N 0 1 N N N 52.163 1.279 8.824 -4.671 -3.156 -0.327 N35 GDJ 38 GDJ N39 N4 N 0 1 N N N 53.574 2.294 6.554 -6.835 -0.163 -0.236 N39 GDJ 39 GDJ N42 N5 N 0 1 N N N 52.775 1.120 4.226 -8.064 2.176 0.821 N42 GDJ 40 GDJ N48 N6 N 0 1 N N N 50.493 -0.742 14.799 4.191 -4.991 -2.918 N48 GDJ 41 GDJ N51 N7 N 0 1 N N N 45.918 6.281 18.554 4.589 1.859 4.579 N51 GDJ 42 GDJ O17 O1 O 0 1 N N N 45.322 7.242 15.018 4.899 1.871 -1.111 O17 GDJ 43 GDJ O18 O2 O 0 1 N N N 46.166 -0.041 11.753 1.275 -5.665 0.190 O18 GDJ 44 GDJ O19 O3 O 0 1 N N N 47.135 -2.096 11.952 1.379 -3.826 1.880 O19 GDJ 45 GDJ O21 O4 O 0 1 N N N 44.647 5.429 13.805 5.182 3.631 0.640 O21 GDJ 46 GDJ O33 O5 O 0 1 N N N 50.004 7.082 10.249 0.118 5.910 -2.615 O33 GDJ 47 GDJ O38 O6 O 0 1 N N N 52.327 3.531 9.489 -4.344 -0.975 -0.079 O38 GDJ 48 GDJ O49 O7 O 0 1 N N N 49.712 -2.205 16.375 4.225 -4.642 -0.728 O49 GDJ 49 GDJ O52 O8 O 0 1 N N N 47.414 4.515 18.627 5.525 1.066 2.731 O52 GDJ 50 GDJ S14 S1 S 0 1 N N N 47.408 -0.678 12.206 1.072 -4.314 0.581 S14 GDJ 51 GDJ S15 S2 S 0 1 N N N 45.850 6.031 14.382 4.379 2.720 -0.098 S15 GDJ 52 GDJ H101 H1 H 0 0 N N N 44.375 4.022 16.199 1.393 2.387 0.156 H101 GDJ 53 GDJ H132 H2 H 0 0 N N N 48.521 5.285 16.536 2.526 1.814 2.781 H132 GDJ 54 GDJ H131 H3 H 0 0 N N N 47.483 6.746 16.412 3.476 3.276 2.421 H131 GDJ 55 GDJ H241 H4 H 0 0 N N N 51.952 -0.980 10.289 -3.251 -5.032 -1.535 H241 GDJ 56 GDJ H261 H5 H 0 0 N N N 49.766 2.517 9.159 -3.076 -1.894 1.364 H261 GDJ 57 GDJ H281 H6 H 0 0 N N N 46.583 4.642 11.938 2.755 2.253 -2.409 H281 GDJ 58 GDJ H011 H7 H 0 0 N N N 48.863 4.003 14.417 5.000 -0.511 1.251 H011 GDJ 59 GDJ H021 H8 H 0 0 N N N 49.296 1.647 13.752 4.245 -2.757 0.594 H021 GDJ 60 GDJ H071 H9 H 0 0 N N N 45.252 -0.687 14.860 -0.126 -2.137 -1.173 H071 GDJ 61 GDJ H081 H10 H 0 0 N N N 43.056 -0.055 15.848 -1.559 -0.193 -1.498 H081 GDJ 62 GDJ H091 H11 H 0 0 N N N 42.627 2.301 16.512 -0.809 2.050 -0.831 H091 GDJ 63 GDJ H161 H12 H 0 0 N N N 47.306 -1.613 15.685 1.523 -4.653 -2.103 H161 GDJ 64 GDJ H162 H13 H 0 0 N N N 47.908 -2.513 14.252 2.258 -3.090 -2.535 H162 GDJ 65 GDJ H231 H14 H 0 0 N N N 50.045 -1.750 11.663 -0.867 -5.510 -1.154 H231 GDJ 66 GDJ H271 H15 H 0 0 N N N 47.852 1.749 10.538 -0.693 -2.379 1.738 H271 GDJ 67 GDJ H291 H16 H 0 0 N N N 48.309 5.091 10.222 0.971 3.582 -3.463 H291 GDJ 68 GDJ H311 H17 H 0 0 N N N 49.564 8.549 12.402 1.462 6.597 -0.473 H311 GDJ 69 GDJ H321 H18 H 0 0 N N N 47.854 8.096 14.123 3.242 5.260 0.577 H321 GDJ 70 GDJ H342 H19 H 0 0 N N N 51.765 8.026 9.851 -1.005 7.643 -2.562 H342 GDJ 71 GDJ H343 H20 H 0 0 N N N 50.656 8.865 10.987 -0.534 6.986 -0.976 H343 GDJ 72 GDJ H341 H21 H 0 0 N N N 51.558 7.408 11.525 0.676 7.800 -1.996 H341 GDJ 73 GDJ H372 H22 H 0 0 N N N 54.880 2.466 8.211 -6.968 -1.961 -1.315 H372 GDJ 74 GDJ H371 H23 H 0 0 N N N 54.108 4.001 7.686 -7.129 -2.127 0.450 H371 GDJ 75 GDJ H401 H24 H 0 0 N N N 52.076 3.444 6.078 -5.459 0.069 1.336 H401 GDJ 76 GDJ H411 H25 H 0 0 N N N 51.462 2.575 4.346 -6.453 2.196 2.170 H411 GDJ 77 GDJ H431 H26 H 0 0 N N N 54.281 -0.034 4.689 -7.748 2.164 -1.256 H431 GDJ 78 GDJ H441 H27 H 0 0 N N N 54.885 0.829 6.430 -8.899 -0.298 0.134 H441 GDJ 79 GDJ H452 H28 H 0 0 N N N 53.011 -0.354 2.730 -9.370 3.819 0.920 H452 GDJ 80 GDJ H451 H29 H 0 0 N N N 52.428 1.241 2.145 -7.822 4.135 0.101 H451 GDJ 81 GDJ H461 H30 H 0 0 N N N 50.633 -0.454 2.071 -7.879 5.205 2.337 H461 GDJ 82 GDJ H462 H31 H 0 0 N N N 50.833 -0.747 3.832 -8.183 3.619 3.087 H462 GDJ 83 GDJ H463 H32 H 0 0 N N N 50.249 0.848 3.248 -6.634 3.934 2.268 H463 GDJ 84 GDJ H351 H33 H 0 0 N N N 52.579 0.592 8.228 -5.284 -3.878 -0.537 H351 GDJ 85 GDJ H482 H34 H 0 0 N N N 51.418 -0.742 15.179 3.715 -4.909 -3.760 H482 GDJ 86 GDJ H481 H35 H 0 0 N N N 50.283 -0.188 13.994 5.071 -5.399 -2.897 H481 GDJ 87 GDJ H511 H36 H 0 0 N N N 45.587 6.139 19.487 3.852 2.336 4.991 H511 GDJ 88 GDJ H512 H37 H 0 0 N N N 45.544 7.024 17.999 5.315 1.522 5.127 H512 GDJ 89 GDJ H1 H38 H 0 1 N N N 51.092 1.060 5.237 -6.000 2.311 0.452 H1 GDJ 90 GDJ H2 H39 H 0 1 N N N 51.706 1.929 6.969 -7.151 -0.151 1.842 H2 GDJ 91 GDJ H4 H40 H 0 1 N N N 54.647 1.485 3.804 -9.441 1.944 -0.750 H4 GDJ 92 GDJ H3 H41 H 0 1 N N N 55.264 2.344 5.543 -8.447 -0.183 -1.584 H3 GDJ 93 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GDJ C45 C46 SING N N 1 GDJ C45 N42 SING N N 2 GDJ N42 C43 SING N N 3 GDJ N42 C41 SING N N 4 GDJ C43 C44 SING N N 5 GDJ C41 C40 SING N N 6 GDJ C44 N39 SING N N 7 GDJ C40 N39 SING N N 8 GDJ N39 C37 SING N N 9 GDJ C37 C36 SING N N 10 GDJ C36 N35 SING N N 11 GDJ C36 O38 DOUB N N 12 GDJ N35 C25 SING N N 13 GDJ C25 C26 DOUB Y N 14 GDJ C25 C24 SING Y N 15 GDJ C26 C27 SING Y N 16 GDJ O33 C34 SING N N 17 GDJ O33 C30 SING N N 18 GDJ C24 C23 DOUB Y N 19 GDJ C27 C20 DOUB Y N 20 GDJ C29 C30 DOUB Y N 21 GDJ C29 C28 SING Y N 22 GDJ C23 C20 SING Y N 23 GDJ C20 S14 SING N N 24 GDJ C30 C31 SING Y N 25 GDJ O18 S14 DOUB N N 26 GDJ O19 S14 DOUB N N 27 GDJ C28 C22 DOUB Y N 28 GDJ S14 N12 SING N N 29 GDJ C31 C32 DOUB Y N 30 GDJ C22 C32 SING Y N 31 GDJ C22 S15 SING N N 32 GDJ O21 S15 DOUB N N 33 GDJ N12 C03 SING N N 34 GDJ N12 C16 SING N N 35 GDJ C02 C03 DOUB Y N 36 GDJ C02 C01 SING Y N 37 GDJ S15 O17 DOUB N N 38 GDJ S15 N11 SING N N 39 GDJ C03 C04 SING Y N 40 GDJ C01 C06 DOUB Y N 41 GDJ N48 C47 SING N N 42 GDJ C16 C47 SING N N 43 GDJ C04 C07 DOUB Y N 44 GDJ C04 C05 SING Y N 45 GDJ C07 C08 SING Y N 46 GDJ C06 C05 SING Y N 47 GDJ C06 N11 SING N N 48 GDJ C05 C10 DOUB Y N 49 GDJ C47 O49 DOUB N N 50 GDJ N11 C13 SING N N 51 GDJ C08 C09 DOUB Y N 52 GDJ C10 C09 SING Y N 53 GDJ C13 C50 SING N N 54 GDJ C50 N51 SING N N 55 GDJ C50 O52 DOUB N N 56 GDJ C10 H101 SING N N 57 GDJ C13 H132 SING N N 58 GDJ C13 H131 SING N N 59 GDJ C24 H241 SING N N 60 GDJ C26 H261 SING N N 61 GDJ C28 H281 SING N N 62 GDJ C01 H011 SING N N 63 GDJ C02 H021 SING N N 64 GDJ C07 H071 SING N N 65 GDJ C08 H081 SING N N 66 GDJ C09 H091 SING N N 67 GDJ C16 H161 SING N N 68 GDJ C16 H162 SING N N 69 GDJ C23 H231 SING N N 70 GDJ C27 H271 SING N N 71 GDJ C29 H291 SING N N 72 GDJ C31 H311 SING N N 73 GDJ C32 H321 SING N N 74 GDJ C34 H342 SING N N 75 GDJ C34 H343 SING N N 76 GDJ C34 H341 SING N N 77 GDJ C37 H372 SING N N 78 GDJ C37 H371 SING N N 79 GDJ C40 H401 SING N N 80 GDJ C41 H411 SING N N 81 GDJ C43 H431 SING N N 82 GDJ C44 H441 SING N N 83 GDJ C45 H452 SING N N 84 GDJ C45 H451 SING N N 85 GDJ C46 H461 SING N N 86 GDJ C46 H462 SING N N 87 GDJ C46 H463 SING N N 88 GDJ N35 H351 SING N N 89 GDJ N48 H482 SING N N 90 GDJ N48 H481 SING N N 91 GDJ N51 H511 SING N N 92 GDJ N51 H512 SING N N 93 GDJ C41 H1 SING N N 94 GDJ C40 H2 SING N N 95 GDJ C43 H4 SING N N 96 GDJ C44 H3 SING N N 97 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GDJ InChI InChI 1.03 "InChI=1S/C35H41N7O8S2/c1-3-39-18-20-40(21-19-39)24-35(45)38-25-8-12-27(13-9-25)51(46,47)41(22-33(36)43)31-16-17-32(30-7-5-4-6-29(30)31)42(23-34(37)44)52(48,49)28-14-10-26(50-2)11-15-28/h4-17H,3,18-24H2,1-2H3,(H2,36,43)(H2,37,44)(H,38,45)" GDJ InChIKey InChI 1.03 KTGQNHLFJOVZNG-UHFFFAOYSA-N GDJ SMILES_CANONICAL CACTVS 3.385 "CCN1CCN(CC1)CC(=O)Nc2ccc(cc2)[S](=O)(=O)N(CC(N)=O)c3ccc(N(CC(N)=O)[S](=O)(=O)c4ccc(OC)cc4)c5ccccc35" GDJ SMILES CACTVS 3.385 "CCN1CCN(CC1)CC(=O)Nc2ccc(cc2)[S](=O)(=O)N(CC(N)=O)c3ccc(N(CC(N)=O)[S](=O)(=O)c4ccc(OC)cc4)c5ccccc35" GDJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN1CCN(CC1)CC(=O)Nc2ccc(cc2)S(=O)(=O)N(CC(=O)N)c3ccc(c4c3cccc4)N(CC(=O)N)S(=O)(=O)c5ccc(cc5)OC" GDJ SMILES "OpenEye OEToolkits" 2.0.7 "CCN1CCN(CC1)CC(=O)Nc2ccc(cc2)S(=O)(=O)N(CC(=O)N)c3ccc(c4c3cccc4)N(CC(=O)N)S(=O)(=O)c5ccc(cc5)OC" # _pdbx_chem_comp_identifier.comp_id GDJ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[4-[(2-azanyl-2-oxidanylidene-ethyl)-[4-[(2-azanyl-2-oxidanylidene-ethyl)-(4-methoxyphenyl)sulfonyl-amino]naphthalen-1-yl]sulfamoyl]phenyl]-2-(4-ethylpiperazin-1-yl)ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GDJ "Create component" 2022-05-06 PDBJ GDJ "Initial release" 2022-07-06 RCSB #