data_GDY # _chem_comp.id GDY _chem_comp.name "(5Z)-5-({4-[2-(thiophen-2-yl)ethoxy]phenyl}methylidene)-1,3-thiazolidine-2,4-dione" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H13 N O3 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-05-18 _chem_comp.pdbx_modified_date 2019-05-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 331.409 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GDY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6DGR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GDY C10 C1 C 0 1 Y N N 18.650 61.569 13.079 -0.379 1.135 -0.837 C10 GDY 1 GDY C13 C2 C 0 1 Y N N 16.673 61.955 14.972 -0.468 -1.486 0.090 C13 GDY 2 GDY C15 C3 C 0 1 N N N 18.281 61.644 16.924 -2.950 -1.476 -0.056 C15 GDY 3 GDY C17 C4 C 0 1 N N N 18.821 63.038 19.137 -5.471 -1.218 0.085 C17 GDY 4 GDY C20 C5 C 0 1 N N N 20.519 64.539 18.799 -6.000 1.004 0.339 C20 GDY 5 GDY C01 C6 C 0 1 Y N N 18.228 66.995 8.518 7.419 -1.032 -0.527 C01 GDY 6 GDY C02 C7 C 0 1 Y N N 18.194 65.587 8.817 6.320 -0.396 -1.079 C02 GDY 7 GDY C03 C8 C 0 1 Y N N 16.987 65.161 9.401 5.637 0.379 -0.235 C03 GDY 8 GDY C05 C9 C 0 1 Y N N 17.065 67.714 8.834 7.628 -0.774 0.765 C05 GDY 9 GDY C06 C10 C 0 1 N N N 16.583 63.741 9.850 4.406 1.174 -0.589 C06 GDY 10 GDY C07 C11 C 0 1 N N N 17.655 62.827 10.463 3.160 0.319 -0.349 C07 GDY 11 GDY C09 C12 C 0 1 Y N N 17.350 61.812 12.647 0.795 0.457 -0.528 C09 GDY 12 GDY C11 C13 C 0 1 Y N N 18.969 61.517 14.445 -1.597 0.515 -0.680 C11 GDY 13 GDY C12 C14 C 0 1 Y N N 17.983 61.736 15.406 -1.653 -0.805 -0.214 C12 GDY 14 GDY C14 C15 C 0 1 Y N N 16.362 62.002 13.609 0.745 -0.851 -0.060 C14 GDY 15 GDY C16 C16 C 0 1 N N N 19.013 62.726 17.755 -4.084 -0.741 0.069 C16 GDY 16 GDY N19 N1 N 0 1 N N N 19.638 64.003 19.649 -6.385 -0.272 0.222 N19 GDY 17 GDY O08 O1 O 0 1 N N N 17.015 61.859 11.272 1.994 1.074 -0.685 O08 GDY 18 GDY O18 O2 O 0 1 N N N 17.876 62.438 19.984 -5.760 -2.395 -0.025 O18 GDY 19 GDY O21 O3 O 0 1 N N N 21.436 65.551 19.099 -6.726 1.971 0.470 O21 GDY 20 GDY S04 S1 S 0 1 Y N N 16.018 66.559 9.491 6.390 0.329 1.353 S04 GDY 21 GDY S22 S2 S 0 1 N N N 20.284 63.778 17.304 -4.230 1.018 0.253 S22 GDY 22 GDY H1 H1 H 0 1 N N N 19.430 61.417 12.348 -0.335 2.153 -1.196 H1 GDY 23 GDY H2 H2 H 0 1 N N N 15.888 62.090 15.701 -0.505 -2.503 0.449 H2 GDY 24 GDY H3 H3 H 0 1 N N N 17.952 60.756 17.443 -3.001 -2.555 -0.040 H3 GDY 25 GDY H5 H5 H 0 1 N N N 19.094 67.468 8.078 8.057 -1.691 -1.098 H5 GDY 26 GDY H6 H6 H 0 1 N N N 19.018 64.920 8.612 6.038 -0.518 -2.114 H6 GDY 27 GDY H7 H7 H 0 1 N N N 16.880 68.768 8.690 8.433 -1.179 1.359 H7 GDY 28 GDY H8 H8 H 0 1 N N N 15.786 63.853 10.600 4.360 2.067 0.034 H8 GDY 29 GDY H9 H9 H 0 1 N N N 16.184 63.223 8.965 4.451 1.465 -1.638 H9 GDY 30 GDY H10 H10 H 0 1 N N N 18.217 62.326 9.661 3.207 -0.574 -0.973 H10 GDY 31 GDY H11 H11 H 0 1 N N N 18.345 63.425 11.077 3.115 0.028 0.700 H11 GDY 32 GDY H12 H12 H 0 1 N N N 19.983 61.306 14.753 -2.509 1.044 -0.915 H12 GDY 33 GDY H13 H13 H 0 1 N N N 15.344 62.188 13.300 1.660 -1.374 0.177 H13 GDY 34 GDY H14 H14 H 0 1 N N N 19.581 64.292 20.605 -7.327 -0.501 0.238 H14 GDY 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GDY C01 C02 SING Y N 1 GDY C01 C05 DOUB Y N 2 GDY C02 C03 DOUB Y N 3 GDY C05 S04 SING Y N 4 GDY C03 S04 SING Y N 5 GDY C03 C06 SING N N 6 GDY C06 C07 SING N N 7 GDY C07 O08 SING N N 8 GDY O08 C09 SING N N 9 GDY C09 C10 DOUB Y N 10 GDY C09 C14 SING Y N 11 GDY C10 C11 SING Y N 12 GDY C14 C13 DOUB Y N 13 GDY C11 C12 DOUB Y N 14 GDY C13 C12 SING Y N 15 GDY C12 C15 SING N N 16 GDY C15 C16 DOUB N Z 17 GDY S22 C16 SING N N 18 GDY S22 C20 SING N N 19 GDY C16 C17 SING N N 20 GDY C20 O21 DOUB N N 21 GDY C20 N19 SING N N 22 GDY C17 N19 SING N N 23 GDY C17 O18 DOUB N N 24 GDY C10 H1 SING N N 25 GDY C13 H2 SING N N 26 GDY C15 H3 SING N N 27 GDY C01 H5 SING N N 28 GDY C02 H6 SING N N 29 GDY C05 H7 SING N N 30 GDY C06 H8 SING N N 31 GDY C06 H9 SING N N 32 GDY C07 H10 SING N N 33 GDY C07 H11 SING N N 34 GDY C11 H12 SING N N 35 GDY C14 H13 SING N N 36 GDY N19 H14 SING N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GDY SMILES ACDLabs 12.01 "c1cc(ccc1OCCc2cccs2)[C@H]=C3C(NC(=O)S3)=O" GDY InChI InChI 1.03 "InChI=1S/C16H13NO3S2/c18-15-14(22-16(19)17-15)10-11-3-5-12(6-4-11)20-8-7-13-2-1-9-21-13/h1-6,9-10H,7-8H2,(H,17,18,19)" GDY InChIKey InChI 1.03 NTKWOUHXDKSPIX-UHFFFAOYSA-N GDY SMILES_CANONICAL CACTVS 3.385 "O=C1NC(=O)/C(S1)=C/c2ccc(OCCc3sccc3)cc2" GDY SMILES CACTVS 3.385 "O=C1NC(=O)C(S1)=Cc2ccc(OCCc3sccc3)cc2" GDY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(sc1)CCOc2ccc(cc2)C=C3C(=O)NC(=O)S3" GDY SMILES "OpenEye OEToolkits" 2.0.6 "c1cc(sc1)CCOc2ccc(cc2)C=C3C(=O)NC(=O)S3" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GDY "SYSTEMATIC NAME" ACDLabs 12.01 "(5Z)-5-({4-[2-(thiophen-2-yl)ethoxy]phenyl}methylidene)-1,3-thiazolidine-2,4-dione" GDY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "5-[[4-(2-thiophen-2-ylethoxy)phenyl]methylidene]-1,3-thiazolidine-2,4-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GDY "Create component" 2018-05-18 RCSB GDY "Initial release" 2019-05-22 RCSB ##