data_GEL # _chem_comp.id GEL _chem_comp.name 1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H45 N O8 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 489.521 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GEL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1MKV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GEL C1 C1 C 0 1 N N N 32.728 5.162 68.424 0.254 2.192 0.310 C1 GEL 1 GEL O1 O1 O 0 1 N N N 32.995 3.823 67.924 0.425 1.100 1.217 O1 GEL 2 GEL C11 C11 C 0 1 N N N 34.243 3.781 67.174 1.334 1.541 2.227 C11 GEL 3 GEL C12 C12 C 0 1 N N N 34.431 2.532 66.281 1.562 0.414 3.236 C12 GEL 4 GEL C13 C13 C 0 1 N N N 34.379 1.243 67.101 2.536 0.886 4.317 C13 GEL 5 GEL C14 C14 C 0 1 N N N 35.471 0.249 66.667 2.764 -0.241 5.326 C14 GEL 6 GEL C15 C15 C 0 1 N N N 36.851 0.735 67.096 3.738 0.230 6.408 C15 GEL 7 GEL C16 C16 C 0 1 N N N 37.360 -0.006 68.344 3.966 -0.897 7.416 C16 GEL 8 GEL C17 C17 C 0 1 N N N 38.916 -0.135 68.322 4.939 -0.424 8.498 C17 GEL 9 GEL C18 C18 C 0 1 N N N 39.647 0.383 69.606 5.167 -1.552 9.506 C18 GEL 10 GEL C2 C2 C 0 1 N N R 31.559 5.808 67.638 -0.713 1.783 -0.801 C2 GEL 11 GEL O2 O2 O 0 1 N N N 30.331 5.006 67.299 -0.183 0.658 -1.505 O2 GEL 12 GEL P2 P2 P 0 1 N N S 29.719 4.788 65.788 -0.004 1.112 -3.039 P2 GEL 13 GEL O1P O1P O 0 1 N N N 28.330 5.567 65.868 -1.318 1.506 -3.594 O1P GEL 14 GEL O2P O2P O 0 1 N N N 30.600 5.419 64.719 1.007 2.362 -3.115 O2P GEL 15 GEL C22 C22 C 0 1 N N N 29.407 3.097 65.592 0.672 -0.276 -4.008 C22 GEL 16 GEL C23 C23 C 0 1 N N N 30.141 2.112 66.491 0.842 0.154 -5.466 C23 GEL 17 GEL C24 C24 C 0 1 N N N 29.598 0.766 66.286 1.410 -1.010 -6.279 C24 GEL 18 GEL C25 C25 C 0 1 N N N 30.653 -0.255 66.201 1.580 -0.579 -7.738 C25 GEL 19 GEL C26 C26 C 0 1 N N N 30.570 -1.164 67.383 2.148 -1.744 -8.551 C26 GEL 20 GEL C27 C27 C 0 1 N N N 31.298 -0.556 68.590 2.318 -1.314 -10.009 C27 GEL 21 GEL C28 C28 C 0 1 N N N 30.777 -1.153 69.891 2.885 -2.479 -10.822 C28 GEL 22 GEL C3 C3 C 0 1 N N N 31.488 7.299 67.292 -2.065 1.411 -0.190 C3 GEL 23 GEL O3 O3 O 0 1 N N N 32.658 8.064 67.596 -1.894 0.320 0.716 O3 GEL 24 GEL P3 P3 P 0 1 N N R 33.292 8.710 66.220 -3.348 -0.017 1.318 P3 GEL 25 GEL O3P O3P O 0 1 N N N 32.943 7.999 64.964 -4.265 -0.387 0.217 O3P GEL 26 GEL O4P O4P O 0 1 N N N 34.862 8.488 66.400 -3.925 1.276 2.084 O4P GEL 27 GEL O5P O5P O 0 1 N N N 32.984 10.249 65.967 -3.229 -1.244 2.354 O5P GEL 28 GEL C31 C31 C 0 1 N N N 32.425 10.770 67.116 -4.545 -1.494 2.851 C31 GEL 29 GEL C32 C32 C 0 1 N N N 32.364 12.251 66.855 -4.502 -2.656 3.846 C32 GEL 30 GEL N3 N3 N 0 1 N N N 31.504 12.436 65.699 -3.613 -2.311 4.964 N3 GEL 31 GEL H11 1H1 H 0 1 N N N 32.541 5.165 69.523 -0.150 3.050 0.847 H11 GEL 32 GEL H12 2H1 H 0 1 N N N 33.641 5.800 68.409 1.217 2.457 -0.124 H12 GEL 33 GEL H111 1H11 H 0 0 N N N 34.357 4.708 66.565 0.916 2.408 2.739 H111 GEL 34 GEL H112 2H11 H 0 0 N N N 35.110 3.892 67.865 2.284 1.815 1.767 H112 GEL 35 GEL H121 1H12 H 0 0 N N N 33.693 2.513 65.445 1.981 -0.452 2.723 H121 GEL 36 GEL H122 2H12 H 0 0 N N N 35.369 2.596 65.682 0.613 0.140 3.696 H122 GEL 37 GEL H131 1H13 H 0 0 N N N 34.432 1.454 68.194 2.117 1.752 4.830 H131 GEL 38 GEL H132 2H13 H 0 0 N N N 33.366 0.777 67.063 3.485 1.159 3.857 H132 GEL 39 GEL H141 1H14 H 0 0 N N N 35.262 -0.780 67.040 3.183 -1.107 4.814 H141 GEL 40 GEL H142 2H14 H 0 0 N N N 35.428 0.043 65.572 1.815 -0.515 5.786 H142 GEL 41 GEL H151 1H15 H 0 0 N N N 37.583 0.666 66.257 3.319 1.097 6.920 H151 GEL 42 GEL H152 2H15 H 0 0 N N N 36.861 1.839 67.248 4.687 0.504 5.947 H152 GEL 43 GEL H161 1H16 H 0 0 N N N 37.000 0.475 69.283 4.384 -1.763 6.904 H161 GEL 44 GEL H162 2H16 H 0 0 N N N 36.866 -0.998 68.462 3.016 -1.170 7.876 H162 GEL 45 GEL H171 1H17 H 0 0 N N N 39.210 -1.189 68.112 4.521 0.441 9.010 H171 GEL 46 GEL H172 2H17 H 0 0 N N N 39.329 0.367 67.416 5.889 -0.151 8.038 H172 GEL 47 GEL H181 1H18 H 0 0 N N N 40.758 0.290 69.590 5.861 -1.216 10.277 H181 GEL 48 GEL H182 2H18 H 0 0 N N N 39.352 1.437 69.815 4.218 -1.826 9.966 H182 GEL 49 GEL H183 3H18 H 0 0 N N N 39.233 -0.119 70.511 5.586 -2.418 8.994 H183 GEL 50 GEL H2 H2 H 0 1 N N N 32.529 5.596 67.131 -0.844 2.616 -1.493 H2 GEL 51 GEL HOP2 2HOP H 0 0 N N N 30.246 5.293 63.846 1.849 2.063 -2.745 HOP2 GEL 52 GEL H221 1H22 H 0 0 N N N 28.309 2.919 65.680 1.640 -0.566 -3.600 H221 GEL 53 GEL H222 2H22 H 0 0 N N N 29.585 2.817 64.527 -0.012 -1.122 -3.957 H222 GEL 54 GEL H231 1H23 H 0 0 N N N 31.245 2.148 66.342 -0.125 0.445 -5.875 H231 GEL 55 GEL H232 2H23 H 0 0 N N N 30.114 2.418 67.562 1.527 1.001 -5.518 H232 GEL 56 GEL H241 1H24 H 0 0 N N N 28.851 0.508 67.073 2.378 -1.300 -5.871 H241 GEL 57 GEL H242 2H24 H 0 0 N N N 28.932 0.732 65.392 0.725 -1.857 -6.228 H242 GEL 58 GEL H251 1H25 H 0 0 N N N 30.618 -0.814 65.237 0.612 -0.289 -8.146 H251 GEL 59 GEL H252 2H25 H 0 0 N N N 31.666 0.196 66.088 2.265 0.266 -7.789 H252 GEL 60 GEL H261 1H26 H 0 0 N N N 29.514 -1.427 67.627 3.116 -2.035 -8.142 H261 GEL 61 GEL H262 2H26 H 0 0 N N N 30.947 -2.185 67.145 1.463 -2.591 -8.499 H262 GEL 62 GEL H271 1H27 H 0 0 N N N 32.404 -0.661 68.501 1.350 -1.023 -10.417 H271 GEL 63 GEL H272 2H27 H 0 0 N N N 31.235 0.557 68.592 3.002 -0.467 -10.060 H272 GEL 64 GEL H281 1H28 H 0 0 N N N 31.305 -0.711 70.767 3.007 -2.172 -11.861 H281 GEL 65 GEL H282 2H28 H 0 0 N N N 29.670 -1.047 69.979 3.853 -2.769 -10.414 H282 GEL 66 GEL H283 3H28 H 0 0 N N N 30.839 -2.266 69.888 2.201 -3.325 -10.771 H283 GEL 67 GEL H31 1H3 H 0 1 N N N 31.218 7.427 66.217 -2.470 2.269 0.346 H31 GEL 68 GEL H32 2H3 H 0 1 N N N 30.596 7.759 67.777 -2.755 1.120 -0.982 H32 GEL 69 GEL HOP4 4HOP H 0 0 N N N 35.227 8.860 65.606 -3.300 1.484 2.792 HOP4 GEL 70 GEL H311 1H31 H 0 0 N N N 31.447 10.314 67.396 -4.920 -0.601 3.352 H311 GEL 71 GEL H312 2H31 H 0 0 N N N 32.961 10.492 68.053 -5.204 -1.750 2.022 H312 GEL 72 GEL H321 1H32 H 0 0 N N N 32.040 12.841 67.743 -5.505 -2.846 4.226 H321 GEL 73 GEL H322 2H32 H 0 0 N N N 33.369 12.718 66.735 -4.127 -3.549 3.346 H322 GEL 74 GEL HN31 1HN3 H 0 0 N N N 31.462 13.439 65.522 -3.615 -3.101 5.591 HN31 GEL 75 GEL HN32 2HN3 H 0 0 N N N 30.584 12.008 65.808 -2.681 -2.245 4.583 HN32 GEL 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GEL C1 O1 SING N N 1 GEL C1 C2 SING N N 2 GEL C1 H11 SING N N 3 GEL C1 H12 SING N N 4 GEL O1 C11 SING N N 5 GEL C11 C12 SING N N 6 GEL C11 H111 SING N N 7 GEL C11 H112 SING N N 8 GEL C12 C13 SING N N 9 GEL C12 H121 SING N N 10 GEL C12 H122 SING N N 11 GEL C13 C14 SING N N 12 GEL C13 H131 SING N N 13 GEL C13 H132 SING N N 14 GEL C14 C15 SING N N 15 GEL C14 H141 SING N N 16 GEL C14 H142 SING N N 17 GEL C15 C16 SING N N 18 GEL C15 H151 SING N N 19 GEL C15 H152 SING N N 20 GEL C16 C17 SING N N 21 GEL C16 H161 SING N N 22 GEL C16 H162 SING N N 23 GEL C17 C18 SING N N 24 GEL C17 H171 SING N N 25 GEL C17 H172 SING N N 26 GEL C18 H181 SING N N 27 GEL C18 H182 SING N N 28 GEL C18 H183 SING N N 29 GEL C2 O2 SING N N 30 GEL C2 C3 SING N N 31 GEL C2 H2 SING N N 32 GEL O2 P2 SING N N 33 GEL P2 O1P DOUB N N 34 GEL P2 O2P SING N N 35 GEL P2 C22 SING N N 36 GEL O2P HOP2 SING N N 37 GEL C22 C23 SING N N 38 GEL C22 H221 SING N N 39 GEL C22 H222 SING N N 40 GEL C23 C24 SING N N 41 GEL C23 H231 SING N N 42 GEL C23 H232 SING N N 43 GEL C24 C25 SING N N 44 GEL C24 H241 SING N N 45 GEL C24 H242 SING N N 46 GEL C25 C26 SING N N 47 GEL C25 H251 SING N N 48 GEL C25 H252 SING N N 49 GEL C26 C27 SING N N 50 GEL C26 H261 SING N N 51 GEL C26 H262 SING N N 52 GEL C27 C28 SING N N 53 GEL C27 H271 SING N N 54 GEL C27 H272 SING N N 55 GEL C28 H281 SING N N 56 GEL C28 H282 SING N N 57 GEL C28 H283 SING N N 58 GEL C3 O3 SING N N 59 GEL C3 H31 SING N N 60 GEL C3 H32 SING N N 61 GEL O3 P3 SING N N 62 GEL P3 O3P DOUB N N 63 GEL P3 O4P SING N N 64 GEL P3 O5P SING N N 65 GEL O4P HOP4 SING N N 66 GEL O5P C31 SING N N 67 GEL C31 C32 SING N N 68 GEL C31 H311 SING N N 69 GEL C31 H312 SING N N 70 GEL C32 N3 SING N N 71 GEL C32 H321 SING N N 72 GEL C32 H322 SING N N 73 GEL N3 HN31 SING N N 74 GEL N3 HN32 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GEL SMILES ACDLabs 10.04 "O=P(OCC(OP(=O)(O)CCCCCCC)COCCCCCCCC)(OCCN)O" GEL SMILES_CANONICAL CACTVS 3.341 "CCCCCCCCOC[C@H](CO[P@@](O)(=O)OCCN)O[P@](O)(=O)CCCCCCC" GEL SMILES CACTVS 3.341 "CCCCCCCCOC[CH](CO[P](O)(=O)OCCN)O[P](O)(=O)CCCCCCC" GEL SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCCCCOCC(CO[P@](=O)(O)OCCN)O[P@](=O)(CCCCCCC)O" GEL SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCCCCOCC(COP(=O)(O)OCCN)OP(=O)(CCCCCCC)O" GEL InChI InChI 1.03 "InChI=1S/C20H45NO8P2/c1-3-5-7-9-10-12-15-26-18-20(19-28-31(24,25)27-16-14-21)29-30(22,23)17-13-11-8-6-4-2/h20H,3-19,21H2,1-2H3,(H,22,23)(H,24,25)/t20-/m1/s1" GEL InChIKey InChI 1.03 RCCNUBYROFOKAU-HXUWFJFHSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GEL "SYSTEMATIC NAME" ACDLabs 10.04 "(1R)-2-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octyloxy)methyl]ethyl hydrogen (S)-heptylphosphonate" GEL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[1-(2-aminoethoxy-hydroxy-phosphoryl)oxy-3-octoxy-propan-2-yl]oxy-heptyl-phosphinic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GEL "Create component" 1999-07-08 EBI GEL "Modify descriptor" 2011-06-04 RCSB #