data_GER # _chem_comp.id GER _chem_comp.name "GERAN-8-YL GERAN" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H34" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2000-01-19 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 274.484 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GER _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1DOA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GER C1 C1 C 0 1 N N N N N N 61.911 15.896 40.363 8.160 -0.190 0.569 C1 GER 1 GER C2 C2 C 0 1 N N N N N N 61.687 14.397 40.304 6.659 -0.313 0.635 C2 GER 2 GER C3 C3 C 0 1 N N N N N N 61.790 13.612 41.395 5.978 -0.612 -0.444 C3 GER 3 GER C4 C4 C 0 1 N N N N N N 62.145 14.309 42.700 6.695 -0.831 -1.751 C4 GER 4 GER C5 C5 C 0 1 N N N N N N 61.555 12.091 41.286 4.478 -0.735 -0.377 C5 GER 5 GER C6 C6 C 0 1 N N N N N N 60.997 11.394 40.050 3.838 0.594 -0.783 C6 GER 6 GER C7 C7 C 0 1 N N N N N N 61.507 9.970 39.929 2.338 0.470 -0.717 C7 GER 7 GER C8 C8 C 0 1 N N N N N N 61.819 9.500 38.703 1.649 1.261 0.069 C8 GER 8 GER C9 C9 C 0 1 N N N N N N 61.616 10.491 37.555 2.364 2.203 1.004 C9 GER 9 GER C10 C10 C 0 1 N N N N N N 62.329 8.028 38.636 0.143 1.228 0.038 C10 GER 10 GER C11 C11 C 0 1 N N N N N N 62.504 7.258 37.322 -0.370 0.294 1.136 C11 GER 11 GER C12 C12 C 0 1 N N N N N N 62.675 5.767 37.537 -1.876 0.262 1.105 C12 GER 12 GER C13 C13 C 0 1 N N N N N N 62.851 4.910 36.502 -2.503 -0.873 0.915 C13 GER 13 GER C14 C14 C 0 1 N N N N N N 62.874 5.508 35.096 -1.722 -2.121 0.596 C14 GER 14 GER C15 C15 C 0 1 N N N N N N 63.029 3.409 36.754 -4.006 -0.929 1.015 C15 GER 15 GER C16 C16 C 0 1 N N N N N N 64.026 2.539 35.992 -4.616 -0.778 -0.379 C16 GER 16 GER C17 C17 C 0 1 N N N N N N 64.267 1.224 36.703 -6.119 -0.835 -0.279 C17 GER 17 GER C18 C18 C 0 1 N N N N N N 64.144 0.070 36.016 -6.837 0.209 -0.613 C18 GER 18 GER C19 C19 C 0 1 N N N N N N 63.758 0.207 34.539 -6.160 1.505 -0.975 C19 GER 19 GER C20 C20 C 0 1 N N N N N N 64.412 -1.213 36.841 -8.341 0.112 -0.636 C20 GER 20 GER H11 H11 H 0 1 N N N N N N 61.965 16.218 41.413 8.547 0.062 1.556 H11 GER 21 GER H12 H12 H 0 1 N N N N N N 62.853 16.146 39.854 8.588 -1.137 0.240 H12 GER 22 GER H13 H13 H 0 1 N N N N N N 61.077 16.411 39.864 8.429 0.595 -0.138 H13 GER 23 GER H21 H21 H 0 1 N N N N N N 61.437 13.943 39.356 6.145 -0.156 1.572 H21 GER 24 GER H41 H41 H 0 1 N N N N N N 62.231 13.563 43.503 6.960 -1.884 -1.847 H41 GER 25 GER H42 H42 H 0 1 N N N N N N 63.104 14.836 42.585 6.043 -0.543 -2.576 H42 GER 26 GER H43 H43 H 0 1 N N N N N N 61.357 15.033 42.955 7.601 -0.225 -1.775 H43 GER 27 GER H51 H51 H 0 1 N N N N N N 62.548 11.642 41.438 4.148 -1.520 -1.058 H51 GER 28 GER H52 H52 H 0 1 N N N N N N 60.734 11.948 42.004 4.179 -0.987 0.640 H52 GER 29 GER H61 H61 H 0 1 N N N N N N 59.900 11.371 40.123 4.168 1.379 -0.102 H61 GER 30 GER H62 H62 H 0 1 N N N N N N 61.326 11.954 39.162 4.137 0.845 -1.801 H62 GER 31 GER H71 H71 H 0 1 N N N N N N 61.618 9.347 40.804 1.830 -0.270 -1.317 H71 GER 32 GER H91 H91 H 0 1 N N N N N N 61.567 11.514 37.957 2.616 3.120 0.472 H91 GER 33 GER H92 H92 H 0 1 N N N N N N 62.458 10.414 36.851 1.715 2.438 1.847 H92 GER 34 GER H93 H93 H 0 1 N N N N N N 60.677 10.258 37.032 3.276 1.730 1.367 H93 GER 35 GER H101 H101 H 0 0 N N N N N N 63.330 8.050 39.091 -0.246 2.233 0.205 H101 GER 36 GER H102 H102 H 0 0 N N N N N N 61.502 7.480 39.111 -0.193 0.866 -0.933 H102 GER 37 GER H111 H111 H 0 0 N N N N N N 61.609 7.420 36.703 0.019 -0.711 0.969 H111 GER 38 GER H112 H112 H 0 0 N N N N N N 63.416 7.632 36.834 -0.034 0.656 2.108 H112 GER 39 GER H121 H121 H 0 0 N N N N N N 62.656 5.377 38.544 -2.439 1.174 1.240 H121 GER 40 GER H141 H141 H 0 0 N N N N N N 62.880 6.606 35.164 -1.380 -2.583 1.522 H141 GER 41 GER H142 H142 H 0 0 N N N N N N 63.778 5.169 34.568 -2.359 -2.820 0.055 H142 GER 42 GER H143 H143 H 0 0 N N N N N N 61.981 5.180 34.544 -0.860 -1.863 -0.020 H143 GER 43 GER H151 H151 H 0 0 N N N N N N 63.330 3.330 37.809 -4.306 -1.887 1.442 H151 GER 44 GER H152 H152 H 0 0 N N N N N N 62.067 3.007 36.403 -4.358 -0.120 1.656 H152 GER 45 GER H161 H161 H 0 0 N N N N N N 63.623 2.332 34.989 -4.316 0.179 -0.805 H161 GER 46 GER H162 H162 H 0 0 N N N N N N 64.982 3.080 35.928 -4.264 -1.587 -1.020 H162 GER 47 GER H171 H171 H 0 0 N N N N N N 64.535 1.210 37.749 -6.603 -1.735 0.068 H171 GER 48 GER H191 H191 H 0 0 N N N N N N 62.662 0.240 34.447 -5.879 1.487 -2.027 H191 GER 49 GER H192 H192 H 0 0 N N N N N N 64.188 1.134 34.132 -6.844 2.335 -0.795 H192 GER 50 GER H193 H193 H 0 0 N N N N N N 64.147 -0.655 33.977 -5.267 1.632 -0.362 H193 GER 51 GER H201 H201 H 0 0 N N N N N N 64.476 -2.078 36.164 -8.645 -0.894 -0.348 H201 GER 52 GER H202 H202 H 0 0 N N N N N N 65.360 -1.105 37.388 -8.762 0.833 0.065 H202 GER 53 GER H203 H203 H 0 0 N N N N N N 63.591 -1.367 37.556 -8.703 0.327 -1.641 H203 GER 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GER C1 C2 SING N N 1 GER C1 H11 SING N N 2 GER C1 H12 SING N N 3 GER C1 H13 SING N N 4 GER C2 C3 DOUB N E 5 GER C2 H21 SING N N 6 GER C3 C4 SING N N 7 GER C3 C5 SING N N 8 GER C4 H41 SING N N 9 GER C4 H42 SING N N 10 GER C4 H43 SING N N 11 GER C5 C6 SING N N 12 GER C5 H51 SING N N 13 GER C5 H52 SING N N 14 GER C6 C7 SING N N 15 GER C6 H61 SING N N 16 GER C6 H62 SING N N 17 GER C7 C8 DOUB N E 18 GER C7 H71 SING N N 19 GER C8 C9 SING N N 20 GER C8 C10 SING N N 21 GER C9 H91 SING N N 22 GER C9 H92 SING N N 23 GER C9 H93 SING N N 24 GER C10 C11 SING N N 25 GER C10 H101 SING N N 26 GER C10 H102 SING N N 27 GER C11 C12 SING N N 28 GER C11 H111 SING N N 29 GER C11 H112 SING N N 30 GER C12 C13 DOUB N E 31 GER C12 H121 SING N N 32 GER C13 C14 SING N N 33 GER C13 C15 SING N N 34 GER C14 H141 SING N N 35 GER C14 H142 SING N N 36 GER C14 H143 SING N N 37 GER C15 C16 SING N N 38 GER C15 H151 SING N N 39 GER C15 H152 SING N N 40 GER C16 C17 SING N N 41 GER C16 H161 SING N N 42 GER C16 H162 SING N N 43 GER C17 C18 DOUB N N 44 GER C17 H171 SING N N 45 GER C18 C19 SING N N 46 GER C18 C20 SING N N 47 GER C19 H191 SING N N 48 GER C19 H192 SING N N 49 GER C19 H193 SING N N 50 GER C20 H201 SING N N 51 GER C20 H202 SING N N 52 GER C20 H203 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GER SMILES ACDLabs 10.04 "C(=C/CCC(=C/C)/C)(\CC/C=C(/CC/C=C(\C)C)C)C" GER SMILES_CANONICAL CACTVS 3.341 "C\C=C(/C)CC\C=C(/C)CC\C=C(/C)CCC=C(C)C" GER SMILES CACTVS 3.341 "CC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C" GER SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C\C=C(/C)\CC\C=C(/C)\CC\C=C(/C)\CCC=C(C)C" GER SMILES "OpenEye OEToolkits" 1.5.0 "CC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C" GER InChI InChI 1.03 "InChI=1S/C20H34/c1-7-18(4)12-9-14-20(6)16-10-15-19(5)13-8-11-17(2)3/h7,11,14-15H,8-10,12-13,16H2,1-6H3/b18-7+,19-15+,20-14+" GER InChIKey InChI 1.03 HSOYJGBJQAKCNA-CAIKYXSQSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GER "SYSTEMATIC NAME" ACDLabs 10.04 "(6E,10E,14E)-2,6,10,14-tetramethylhexadeca-2,6,10,14-tetraene" GER "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(6E,10E,14E)-2,6,10,14-tetramethylhexadeca-2,6,10,14-tetraene" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GER "Create component" 2000-01-19 RCSB GER "Modify descriptor" 2011-06-04 RCSB GER "Modify PCM" 2024-09-27 PDBE # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 GER CYS Geranylgeranylation Lipid/lipid-like "Amino-acid side chain" "Any position" C1 SG PTM-0278 ? 2 GER CMT Geranylgeranylation Lipid/lipid-like "Amino-acid side chain" "Any position" C1 SG ? ? #