data_GET
#
_chem_comp.id GET
_chem_comp.name GENETICIN
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAD
_chem_comp.formula "C20 H40 N4 O10"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms G418
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2002-10-02
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 496.552
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code GET
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1MWL
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GET C11 C11 C 0 1 N N S 12.187 -6.884 5.225 1.133 -0.276 -2.464 C11 GET 1
GET O11 O11 O 0 1 N N N 13.310 -7.625 4.834 0.248 0.814 -2.202 O11 GET 2
GET C21 C21 C 0 1 N N R 10.977 -7.432 4.432 2.351 0.231 -3.239 C21 GET 3
GET N21 N21 N 0 1 N N N 10.817 -8.883 4.681 3.066 1.229 -2.433 N21 GET 4
GET C31 C31 C 0 1 N N R 11.147 -7.128 2.907 1.880 0.873 -4.548 C31 GET 5
GET O31 O31 O 0 1 N N N 10.090 -7.589 2.191 3.010 1.218 -5.351 O31 GET 6
GET C41 C41 C 0 1 N N S 11.307 -5.598 2.726 1.003 -0.135 -5.300 C41 GET 7
GET O41 O41 O 0 1 N N N 11.461 -5.273 1.343 0.431 0.489 -6.450 O41 GET 8
GET C51 C51 C 0 1 N N R 12.540 -5.104 3.551 -0.112 -0.616 -4.370 C51 GET 9
GET O51 O51 O 0 1 N N N 12.385 -5.454 4.966 0.452 -1.266 -3.233 O51 GET 10
GET C61 C61 C 0 1 N N R 12.773 -3.584 3.456 -1.011 -1.599 -5.123 C61 GET 11
GET O61 O61 O 0 1 N N N 13.916 -3.220 4.161 -1.578 -0.949 -6.262 O61 GET 12
GET C71 C71 C 0 1 N N N 11.598 -2.750 4.022 -2.133 -2.075 -4.198 C71 GET 13
GET C12 C12 C 0 1 N N R 16.523 -9.614 6.834 -2.375 0.942 1.116 C12 GET 14
GET N12 N12 N 0 1 N N N 17.663 -9.855 7.741 -3.307 0.491 2.158 N12 GET 15
GET C22 C22 C 0 1 N N N 16.861 -8.450 5.862 -2.963 0.636 -0.262 C22 GET 16
GET C32 C32 C 0 1 N N S 15.668 -8.181 4.909 -1.993 1.105 -1.347 C32 GET 17
GET N32 N32 N 0 1 N N N 16.033 -7.072 3.994 -2.558 0.811 -2.670 N32 GET 18
GET C42 C42 C 0 1 N N R 14.392 -7.842 5.742 -0.658 0.375 -1.188 C42 GET 19
GET C52 C52 C 0 1 N N S 14.061 -9.023 6.695 -0.069 0.682 0.189 C52 GET 20
GET O52 O52 O 0 1 N N N 12.919 -8.707 7.455 1.177 -0.000 0.338 O52 GET 21
GET C62 C62 C 0 1 N N S 15.250 -9.264 7.651 -1.040 0.212 1.275 C62 GET 22
GET O62 O62 O 0 1 N N N 14.936 -10.337 8.526 -0.490 0.498 2.562 O62 GET 23
GET C13 C13 C 0 1 N N R 15.138 -10.124 9.902 -1.023 -0.472 3.464 C13 GET 24
GET C23 C23 C 0 1 N N R 15.568 -11.461 10.549 -0.810 -0.000 4.904 C23 GET 25
GET O23 O23 O 0 1 N N N 16.792 -11.895 9.972 -1.497 1.235 5.111 O23 GET 26
GET C33 C33 C 0 1 N N R 14.426 -12.517 10.328 0.690 0.199 5.147 C33 GET 27
GET N33 N33 N 0 1 N N N 14.755 -13.862 10.901 0.923 0.501 6.566 N33 GET 28
GET C93 C93 C 0 1 N N N 15.678 -14.599 10.003 0.858 1.962 6.703 C93 GET 29
GET C43 C43 C 0 1 N N R 13.107 -11.974 10.971 1.428 -1.088 4.767 C43 GET 30
GET O43 O43 O 0 1 N N N 13.314 -11.791 12.372 1.053 -2.133 5.667 O43 GET 31
GET C83 C83 C 0 1 N N N 12.009 -12.881 10.815 2.939 -0.861 4.845 C83 GET 32
GET C53 C53 C 0 1 N N N 12.740 -10.587 10.382 1.042 -1.480 3.338 C53 GET 33
GET O53 O53 O 0 1 N N N 13.883 -9.652 10.514 -0.361 -1.719 3.262 O53 GET 34
GET H111 1H11 H 0 0 N N N 12.012 -6.988 6.321 1.461 -0.712 -1.520 H111 GET 35
GET H21 H21 H 0 1 N N N 10.049 -6.920 4.780 3.017 -0.602 -3.461 H21 GET 36
GET H211 1H21 H 0 0 N N N 10.019 -9.244 4.158 3.356 0.764 -1.586 H211 GET 37
GET H212 2H21 H 0 0 N N N 10.746 -9.093 5.676 3.907 1.462 -2.938 H212 GET 38
GET H311 1H31 H 0 0 N N N 12.053 -7.652 2.524 1.299 1.769 -4.328 H311 GET 39
GET H31 H31 H 0 1 N N N 10.193 -7.404 1.264 2.665 1.606 -6.167 H31 GET 40
GET H411 1H41 H 0 0 N N N 10.390 -5.084 3.099 1.611 -0.985 -5.610 H411 GET 41
GET H41 H41 H 0 1 N N N 11.559 -4.334 1.232 1.168 0.776 -7.007 H41 GET 42
GET H511 1H51 H 0 0 N N N 13.423 -5.617 3.104 -0.704 0.238 -4.042 H511 GET 43
GET H611 1H61 H 0 0 N N N 12.876 -3.366 2.367 -0.421 -2.455 -5.449 H611 GET 44
GET H61 H61 H 0 1 N N N 14.059 -2.282 4.102 -2.091 -0.199 -5.930 H61 GET 45
GET H711 1H71 H 0 0 N N N 11.766 -1.650 3.953 -2.773 -2.775 -4.734 H711 GET 46
GET H712 2H71 H 0 0 N N N 10.637 -3.035 3.533 -1.701 -2.571 -3.328 H712 GET 47
GET H713 3H71 H 0 0 N N N 11.366 -3.051 5.070 -2.723 -1.219 -3.871 H713 GET 48
GET H12 H12 H 0 1 N N N 16.329 -10.541 6.245 -2.215 2.016 1.212 H12 GET 49
GET H121 1H12 H 0 0 N N N 17.441 -10.619 8.379 -4.168 0.997 2.015 H121 GET 50
GET H122 2H12 H 0 0 N N N 17.943 -9.009 8.237 -3.505 -0.479 1.969 H122 GET 51
GET H221 1H22 H 0 0 N N N 17.172 -7.529 6.408 -3.123 -0.437 -0.358 H221 GET 52
GET H222 2H22 H 0 0 N N N 17.806 -8.637 5.301 -3.914 1.156 -0.375 H222 GET 53
GET H32 H32 H 0 1 N N N 15.441 -9.087 4.300 -1.833 2.179 -1.251 H32 GET 54
GET H321 1H32 H 0 0 N N N 15.248 -6.895 3.367 -3.484 1.211 -2.686 H321 GET 55
GET H322 2H32 H 0 0 N N N 16.902 -7.250 3.491 -2.008 1.326 -3.342 H322 GET 56
GET H421 1H42 H 0 0 N N N 14.561 -6.927 6.357 -0.818 -0.698 -1.284 H421 GET 57
GET H521 1H52 H 0 0 N N N 13.870 -9.940 6.091 0.090 1.755 0.285 H521 GET 58
GET H52 H52 H 0 1 N N N 12.716 -9.429 8.037 1.583 0.333 1.149 H52 GET 59
GET H621 1H62 H 0 0 N N N 15.441 -8.339 8.243 -1.200 -0.861 1.179 H621 GET 60
GET H131 1H13 H 0 0 N N N 15.929 -9.355 10.061 -2.090 -0.594 3.277 H131 GET 61
GET H231 1H23 H 0 0 N N N 15.731 -11.332 11.644 -1.194 -0.751 5.595 H231 GET 62
GET H23 H23 H 0 1 N N N 17.056 -12.716 10.369 -2.435 1.064 4.948 H23 GET 63
GET H331 1H33 H 0 0 N N N 14.304 -12.660 9.229 1.052 1.024 4.534 H331 GET 64
GET H33 H33 H 0 1 N N N 13.914 -14.402 11.106 1.875 0.233 6.766 H33 GET 65
GET H931 1H93 H 0 0 N N N 15.922 -15.599 10.429 1.027 2.237 7.744 H931 GET 66
GET H932 2H93 H 0 0 N N N 15.273 -14.677 8.967 1.625 2.420 6.078 H932 GET 67
GET H933 3H93 H 0 0 N N N 16.596 -14.008 9.778 -0.124 2.313 6.389 H933 GET 68
GET H43 H43 H 0 1 N N N 12.513 -11.461 12.762 1.530 -2.926 5.389 H43 GET 69
GET H831 1H83 H 0 0 N N N 11.069 -12.494 11.273 3.459 -1.778 4.567 H831 GET 70
GET H832 2H83 H 0 0 N N N 11.854 -13.144 9.742 3.222 -0.061 4.160 H832 GET 71
GET H833 3H83 H 0 0 N N N 12.263 -13.891 11.212 3.212 -0.582 5.862 H833 GET 72
GET H531 1H53 H 0 0 N N N 12.385 -10.663 9.327 1.580 -2.384 3.053 H531 GET 73
GET H532 2H53 H 0 0 N N N 11.810 -10.174 10.839 1.309 -0.671 2.658 H532 GET 74
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GET C11 O11 SING N N 1
GET C11 C21 SING N N 2
GET C11 O51 SING N N 3
GET C11 H111 SING N N 4
GET O11 C42 SING N N 5
GET C21 N21 SING N N 6
GET C21 C31 SING N N 7
GET C21 H21 SING N N 8
GET N21 H211 SING N N 9
GET N21 H212 SING N N 10
GET C31 O31 SING N N 11
GET C31 C41 SING N N 12
GET C31 H311 SING N N 13
GET O31 H31 SING N N 14
GET C41 O41 SING N N 15
GET C41 C51 SING N N 16
GET C41 H411 SING N N 17
GET O41 H41 SING N N 18
GET C51 O51 SING N N 19
GET C51 C61 SING N N 20
GET C51 H511 SING N N 21
GET C61 O61 SING N N 22
GET C61 C71 SING N N 23
GET C61 H611 SING N N 24
GET O61 H61 SING N N 25
GET C71 H711 SING N N 26
GET C71 H712 SING N N 27
GET C71 H713 SING N N 28
GET C12 N12 SING N N 29
GET C12 C22 SING N N 30
GET C12 C62 SING N N 31
GET C12 H12 SING N N 32
GET N12 H121 SING N N 33
GET N12 H122 SING N N 34
GET C22 C32 SING N N 35
GET C22 H221 SING N N 36
GET C22 H222 SING N N 37
GET C32 N32 SING N N 38
GET C32 C42 SING N N 39
GET C32 H32 SING N N 40
GET N32 H321 SING N N 41
GET N32 H322 SING N N 42
GET C42 C52 SING N N 43
GET C42 H421 SING N N 44
GET C52 O52 SING N N 45
GET C52 C62 SING N N 46
GET C52 H521 SING N N 47
GET O52 H52 SING N N 48
GET C62 O62 SING N N 49
GET C62 H621 SING N N 50
GET O62 C13 SING N N 51
GET C13 C23 SING N N 52
GET C13 O53 SING N N 53
GET C13 H131 SING N N 54
GET C23 O23 SING N N 55
GET C23 C33 SING N N 56
GET C23 H231 SING N N 57
GET O23 H23 SING N N 58
GET C33 N33 SING N N 59
GET C33 C43 SING N N 60
GET C33 H331 SING N N 61
GET N33 C93 SING N N 62
GET N33 H33 SING N N 63
GET C93 H931 SING N N 64
GET C93 H932 SING N N 65
GET C93 H933 SING N N 66
GET C43 O43 SING N N 67
GET C43 C83 SING N N 68
GET C43 C53 SING N N 69
GET O43 H43 SING N N 70
GET C83 H831 SING N N 71
GET C83 H832 SING N N 72
GET C83 H833 SING N N 73
GET C53 O53 SING N N 74
GET C53 H531 SING N N 75
GET C53 H532 SING N N 76
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GET SMILES ACDLabs 10.04 "O(C2C(O)C(OC1OC(C(O)C)C(O)C(O)C1N)C(N)CC2N)C3OCC(O)(C(NC)C3O)C"
GET SMILES_CANONICAL CACTVS 3.341 "CN[C@@H]1[C@@H](O)[C@H](OC[C@]1(C)O)O[C@H]2[C@H](N)C[C@H](N)[C@@H](O[C@H]3O[C@H]([C@@H](C)O)[C@@H](O)[C@H](O)[C@H]3N)[C@@H]2O"
GET SMILES CACTVS 3.341 "CN[CH]1[CH](O)[CH](OC[C]1(C)O)O[CH]2[CH](N)C[CH](N)[CH](O[CH]3O[CH]([CH](C)O)[CH](O)[CH](O)[CH]3N)[CH]2O"
GET SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H]([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O[C@@H]2[C@H](C[C@H]([C@@H]([C@H]2O)O[C@@H]3[C@@H]([C@H]([C@@](CO3)(C)O)NC)O)N)N)N)O)O)O"
GET SMILES "OpenEye OEToolkits" 1.5.0 "CC(C1C(C(C(C(O1)OC2C(CC(C(C2O)OC3C(C(C(CO3)(C)O)NC)O)N)N)N)O)O)O"
GET InChI InChI 1.03 "InChI=1S/C20H40N4O10/c1-6(25)14-11(27)10(26)9(23)18(32-14)33-15-7(21)4-8(22)16(12(15)28)34-19-13(29)17(24-3)20(2,30)5-31-19/h6-19,24-30H,4-5,21-23H2,1-3H3/t6-,7+,8-,9-,10-,11+,12+,13-,14-,15-,16+,17-,18-,19-,20+/m1/s1"
GET InChIKey InChI 1.03 BRZYSWJRSDMWLG-DJWUNRQOSA-N
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GET "SYSTEMATIC NAME" ACDLabs 10.04 "(1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-2-hydroxycyclohexyl 2-amino-2,7-dideoxy-D-glycero-alpha-D-gluco-heptopyranoside"
GET "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3S,4R,5R,6S)-5-amino-6-[(1R,2S,3S,4R,6S)-4,6-diamino-3-[(2R,3R,4R,5R)-3,5-dihydroxy-5-methyl-4-methylamino-oxan-2-yl]oxy-2-hydroxy-cyclohexyl]oxy-2-(1-hydroxyethyl)oxane-3,4-diol"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GET "Create component" 2002-10-02 RCSB
GET "Modify descriptor" 2011-06-04 RCSB
GET "Modify synonyms" 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id GET
_pdbx_chem_comp_synonyms.name G418
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
##