data_GGA
#
_chem_comp.id GGA
_chem_comp.name "D-GAMMA-GLUTAMYL-N-{[(R)-{4-[(4-AMINOBUTYL)AMINO]BUTYL}(PHOSPHONOOXY)PHOSPHORYL]METHYL}-D-ALANINAMIDE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C17 H37 N5 O9 P2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-10-13
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 517.451
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code GGA
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2IOA
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GGA C1 C1 C 0 1 N N N -13.234 18.507 2.275 -7.384 2.477 -3.370 C1 GGA 1
GGA O2 O2 O 0 1 N N N -14.456 18.563 2.896 -8.154 2.433 -4.320 O2 GGA 2
GGA O4 O4 O 0 1 N N N -11.996 18.601 3.002 -7.703 1.997 -2.140 O4 GGA 3
GGA C6 C6 C 0 1 N N R -13.003 18.386 0.774 -6.006 3.108 -3.391 C6 GGA 4
GGA N8 N8 N 0 1 N N N -14.265 18.100 0.077 -6.098 4.267 -4.242 N8 GGA 5
GGA C10 C10 C 0 1 N N N -12.003 17.274 0.561 -4.968 2.099 -3.889 C10 GGA 6
GGA C12 C12 C 0 1 N N N -11.776 17.051 -0.915 -4.855 0.856 -3.005 C12 GGA 7
GGA C14 C14 C 0 1 N N N -10.814 15.937 -1.090 -3.800 -0.132 -3.474 C14 GGA 8
GGA O16 O16 O 0 1 N N N -10.312 15.372 -0.109 -3.118 0.039 -4.481 O16 GGA 9
GGA N18 N18 N 0 1 N N N -10.537 15.546 -2.390 -3.730 -1.245 -2.645 N18 GGA 10
GGA C20 C20 C 0 1 N N R -9.682 14.465 -2.793 -2.829 -2.342 -2.885 C20 GGA 11
GGA C22 C22 C 0 1 N N N -9.832 13.107 -2.065 -3.476 -3.411 -3.752 C22 GGA 12
GGA C24 C24 C 0 1 N N N -8.214 14.894 -2.861 -2.415 -2.913 -1.536 C24 GGA 13
GGA O26 O26 O 0 1 N N N -8.059 16.110 -3.036 -3.167 -2.949 -0.564 O26 GGA 14
GGA N30 N30 N 0 1 N N N -7.200 13.969 -2.793 -1.121 -3.414 -1.557 N30 GGA 15
GGA C29 C29 C 0 1 N N N -5.832 14.299 -2.927 -0.499 -4.048 -0.416 C29 GGA 16
GGA P34 P34 P 0 1 N N S -5.271 13.150 -3.964 -0.907 -5.778 -0.481 P34 GGA 17
GGA C33 C33 C 0 1 N N N -6.309 12.924 -5.215 -0.238 -6.432 -1.994 C33 GGA 18
GGA C35 C35 C 0 1 N N N -6.430 14.184 -6.068 -0.509 -7.917 -2.192 C35 GGA 19
GGA C37 C37 C 0 1 N N N -7.449 13.986 -7.187 0.089 -8.445 -3.498 C37 GGA 20
GGA C39 C39 C 0 1 N N N -6.880 14.173 -8.590 -0.165 -9.944 -3.652 C39 GGA 21
GGA N44 N44 N 0 1 N N N -8.026 14.004 -9.496 0.418 -10.431 -4.897 N44 GGA 22
GGA C43 C43 C 0 1 N N N -7.625 14.203 -10.882 0.193 -11.861 -5.052 C43 GGA 23
GGA C45 C45 C 0 1 N N N -8.867 14.099 -11.784 0.804 -12.390 -6.344 C45 GGA 24
GGA C47 C47 C 0 1 N N N -8.456 14.377 -13.237 0.595 -13.899 -6.506 C47 GGA 25
GGA C49 C49 C 0 1 N N N -9.699 14.318 -14.133 1.188 -14.436 -7.805 C49 GGA 26
GGA N54 N54 N 0 1 N N N -9.325 14.599 -15.523 1.010 -15.854 -7.945 N54 GGA 27
GGA O56 O56 O 0 1 N N N -5.313 11.943 -3.401 -2.363 -6.076 -0.275 O56 GGA 28
GGA O58 O58 O 0 1 N N N -3.865 13.412 -4.607 0.053 -6.405 0.658 O58 GGA 29
GGA P60 P60 P 0 1 N N N -3.003 14.689 -4.349 0.062 -6.261 2.266 P60 GGA 30
GGA O62 O62 O 0 1 N N N -3.707 15.942 -4.785 1.199 -7.312 2.730 O62 GGA 31
GGA O64 O64 O 0 1 N N N -2.769 14.879 -3.036 -1.317 -6.981 2.705 O64 GGA 32
GGA O66 O66 O 0 1 N N N -1.718 14.533 -5.121 0.239 -4.860 2.773 O66 GGA 33
GGA HO4 HO4 H 0 1 N N N -12.179 18.702 3.929 -8.600 1.608 -2.062 HO4 GGA 34
GGA H6 H6 H 0 1 N N N -12.617 19.331 0.363 -5.768 3.486 -2.391 H6 GGA 35
GGA HN81 1HN8 H 0 0 N N N -15.007 18.035 0.744 -5.253 4.667 -4.616 HN81 GGA 36
GGA HN82 2HN8 H 0 0 N N N -14.462 18.836 -0.570 -6.966 4.774 -4.284 HN82 GGA 37
GGA H101 1H10 H 0 0 N N N -12.390 16.348 1.012 -5.232 1.778 -4.905 H101 GGA 38
GGA H102 2H10 H 0 0 N N N -11.049 17.554 1.032 -3.986 2.584 -3.968 H102 GGA 39
GGA H121 1H12 H 0 0 N N N -11.369 17.966 -1.369 -4.653 1.137 -1.965 H121 GGA 40
GGA H122 2H12 H 0 0 N N N -12.729 16.801 -1.405 -5.816 0.326 -3.019 H122 GGA 41
GGA HN18 HN18 H 0 0 N N N -10.976 16.069 -3.121 -4.343 -1.287 -1.833 HN18 GGA 42
GGA H20 H20 H 0 1 N N N -10.062 14.243 -3.801 -1.951 -1.925 -3.391 H20 GGA 43
GGA H221 1H22 H 0 0 N N N -9.868 12.295 -2.806 -4.354 -3.844 -3.259 H221 GGA 44
GGA H222 2H22 H 0 0 N N N -8.974 12.954 -1.394 -2.778 -4.228 -3.962 H222 GGA 45
GGA H223 3H22 H 0 0 N N N -10.762 13.107 -1.477 -3.807 -2.990 -4.708 H223 GGA 46
GGA HN30 HN30 H 0 0 N N N -7.443 13.011 -2.641 -0.585 -3.331 -2.416 HN30 GGA 47
GGA H291 1H29 H 0 0 N N N -5.309 14.263 -1.960 0.583 -3.890 -0.434 H291 GGA 48
GGA H292 2H29 H 0 0 N N N -5.671 15.324 -3.293 -0.911 -3.585 0.484 H292 GGA 49
GGA H331 1H33 H 0 0 N N N -7.301 12.670 -4.813 0.844 -6.264 -1.968 H331 GGA 50
GGA H332 2H33 H 0 0 N N N -5.922 12.111 -5.847 -0.638 -5.852 -2.832 H332 GGA 51
GGA H351 1H35 H 0 0 N N N -5.450 14.412 -6.512 -1.591 -8.091 -2.187 H351 GGA 52
GGA H352 2H35 H 0 0 N N N -6.766 15.013 -5.428 -0.084 -8.471 -1.346 H352 GGA 53
GGA H371 1H37 H 0 0 N N N -8.254 14.723 -7.047 -0.348 -7.910 -4.349 H371 GGA 54
GGA H372 2H37 H 0 0 N N N -7.798 12.945 -7.120 1.168 -8.247 -3.511 H372 GGA 55
GGA H391 1H39 H 0 0 N N N -6.100 13.427 -8.800 -1.242 -10.145 -3.661 H391 GGA 56
GGA H392 2H39 H 0 0 N N N -6.404 15.157 -8.711 0.270 -10.492 -2.809 H392 GGA 57
GGA HN44 HN44 H 0 0 N N N -8.729 14.675 -9.261 -0.006 -9.936 -5.681 HN44 GGA 58
GGA H431 1H43 H 0 0 N N N -6.894 13.432 -11.169 -0.886 -12.043 -5.021 H431 GGA 59
GGA H432 2H43 H 0 0 N N N -7.166 15.196 -10.996 0.647 -12.362 -4.192 H432 GGA 60
GGA H451 1H45 H 0 0 N N N -9.618 14.837 -11.465 1.878 -12.169 -6.343 H451 GGA 61
GGA H452 2H45 H 0 0 N N N -9.298 13.090 -11.707 0.362 -11.859 -7.196 H452 GGA 62
GGA H471 1H47 H 0 0 N N N -7.729 13.620 -13.565 -0.475 -14.134 -6.466 H471 GGA 63
GGA H472 2H47 H 0 0 N N N -7.998 15.374 -13.307 1.072 -14.419 -5.665 H472 GGA 64
GGA H491 1H49 H 0 0 N N N -10.429 15.068 -13.793 2.265 -14.245 -7.832 H491 GGA 65
GGA H492 2H49 H 0 0 N N N -10.142 13.313 -14.073 0.735 -13.953 -8.677 H492 GGA 66
GGA H541 1H54 H 0 0 N N N -10.150 14.663 -16.084 1.281 -16.462 -7.187 H541 GGA 67
GGA H542 2H54 H 0 0 N N N -8.825 15.464 -15.565 0.812 -16.239 -8.856 H542 GGA 68
GGA HO62 HO62 H 0 0 N N N -3.856 16.501 -4.031 1.448 -7.355 3.678 HO62 GGA 69
GGA HO64 HO64 H 0 0 N N N -1.832 14.924 -2.884 -1.590 -6.952 3.647 HO64 GGA 70
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GGA C1 C6 SING N N 1
GGA C1 O2 DOUB N N 2
GGA C1 O4 SING N N 3
GGA O4 HO4 SING N N 4
GGA C6 N8 SING N N 5
GGA C6 C10 SING N N 6
GGA C6 H6 SING N N 7
GGA N8 HN81 SING N N 8
GGA N8 HN82 SING N N 9
GGA C10 C12 SING N N 10
GGA C10 H101 SING N N 11
GGA C10 H102 SING N N 12
GGA C12 C14 SING N N 13
GGA C12 H121 SING N N 14
GGA C12 H122 SING N N 15
GGA C14 N18 SING N N 16
GGA C14 O16 DOUB N N 17
GGA N18 C20 SING N N 18
GGA N18 HN18 SING N N 19
GGA C20 C24 SING N N 20
GGA C20 C22 SING N N 21
GGA C20 H20 SING N N 22
GGA C22 H221 SING N N 23
GGA C22 H222 SING N N 24
GGA C22 H223 SING N N 25
GGA C24 O26 DOUB N N 26
GGA C24 N30 SING N N 27
GGA N30 C29 SING N N 28
GGA N30 HN30 SING N N 29
GGA C29 P34 SING N N 30
GGA C29 H291 SING N N 31
GGA C29 H292 SING N N 32
GGA P34 C33 SING N N 33
GGA P34 O58 SING N N 34
GGA P34 O56 DOUB N N 35
GGA C33 C35 SING N N 36
GGA C33 H331 SING N N 37
GGA C33 H332 SING N N 38
GGA C35 C37 SING N N 39
GGA C35 H351 SING N N 40
GGA C35 H352 SING N N 41
GGA C37 C39 SING N N 42
GGA C37 H371 SING N N 43
GGA C37 H372 SING N N 44
GGA C39 N44 SING N N 45
GGA C39 H391 SING N N 46
GGA C39 H392 SING N N 47
GGA N44 C43 SING N N 48
GGA N44 HN44 SING N N 49
GGA C43 C45 SING N N 50
GGA C43 H431 SING N N 51
GGA C43 H432 SING N N 52
GGA C45 C47 SING N N 53
GGA C45 H451 SING N N 54
GGA C45 H452 SING N N 55
GGA C47 C49 SING N N 56
GGA C47 H471 SING N N 57
GGA C47 H472 SING N N 58
GGA C49 N54 SING N N 59
GGA C49 H491 SING N N 60
GGA C49 H492 SING N N 61
GGA N54 H541 SING N N 62
GGA N54 H542 SING N N 63
GGA O58 P60 SING N N 64
GGA P60 O66 DOUB N N 65
GGA P60 O62 SING N N 66
GGA P60 O64 SING N N 67
GGA O62 HO62 SING N N 68
GGA O64 HO64 SING N N 69
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GGA SMILES ACDLabs 10.04 "O=P(OP(=O)(O)O)(CNC(=O)C(NC(=O)CCC(C(=O)O)N)C)CCCCNCCCCN"
GGA SMILES_CANONICAL CACTVS 3.341 "C[C@@H](NC(=O)CC[C@@H](N)C(O)=O)C(=O)NC[P@@](=O)(CCCCNCCCCN)O[P](O)(O)=O"
GGA SMILES CACTVS 3.341 "C[CH](NC(=O)CC[CH](N)C(O)=O)C(=O)NC[P](=O)(CCCCNCCCCN)O[P](O)(O)=O"
GGA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H](C(=O)NC[P@@](=O)(CCCCNCCCCN)OP(=O)(O)O)NC(=O)CC[C@H](C(=O)O)N"
GGA SMILES "OpenEye OEToolkits" 1.5.0 "CC(C(=O)NCP(=O)(CCCCNCCCCN)OP(=O)(O)O)NC(=O)CCC(C(=O)O)N"
GGA InChI InChI 1.03 "InChI=1S/C17H37N5O9P2/c1-13(22-15(23)7-6-14(19)17(25)26)16(24)21-12-32(27,31-33(28,29)30)11-5-4-10-20-9-3-2-8-18/h13-14,20H,2-12,18-19H2,1H3,(H,21,24)(H,22,23)(H,25,26)(H2,28,29,30)/t13-,14-,32-/m1/s1"
GGA InChIKey InChI 1.03 GBZVPDJOUXPMNB-HPMPJWHZSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GGA "SYSTEMATIC NAME" ACDLabs 10.04 "D-gamma-glutamyl-N-{[(R)-{4-[(4-aminobutyl)amino]butyl}(phosphonooxy)phosphoryl]methyl}-D-alaninamide"
GGA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R)-2-amino-5-[[(2R)-1-[[4-(4-aminobutylamino)butyl-phosphonooxy-phosphoryl]methylamino]-1-oxo-propan-2-yl]amino]-5-oxo-pentanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GGA "Create component" 2006-10-13 RCSB
GGA "Modify descriptor" 2011-06-04 RCSB
#