data_GGD
#
_chem_comp.id GGD
_chem_comp.name
;NONADEC-10-ENOIC ACID
2-[3,4-DIHYDROXY-6-HYDROXYMETHYL-5-(3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-2-YLOXY)-TETRAHYDRO-PYRAN-2-YLOXY]
-1-OCTADEC-9-ENOYLOXYMETHYL-ETHYL ESTER
;
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C52 H94 O15"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "GLUCOSYL-GALACTOSYL DIACYL-GLYCEROL"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2002-07-25
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 959.294
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code GGD
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1M3X
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GGD CA1 CA1 C 0 1 N N R 20.634 91.211 18.860 -7.268 7.359 -6.038 CA1 GGD 1
GGD CA2 CA2 C 0 1 N N R 20.240 92.228 19.945 -8.069 8.554 -5.514 CA2 GGD 2
GGD CA3 CA3 C 0 1 N N S 20.766 93.504 19.248 -8.954 9.137 -6.615 CA3 GGD 3
GGD CA4 CA4 C 0 1 N N S 22.292 93.499 19.174 -8.147 9.402 -7.886 CA4 GGD 4
GGD CA5 CA5 C 0 1 N N R 22.930 92.118 18.675 -7.387 8.134 -8.292 CA5 GGD 5
GGD CA6 CA6 C 0 1 N N N 24.246 91.682 19.300 -6.499 8.339 -9.513 CA6 GGD 6
GGD OA1 OA1 O 0 1 N N N 19.918 90.067 19.012 -6.372 6.898 -5.038 OA1 GGD 7
GGD OA2 OA2 O 0 1 N N N 18.801 92.223 20.071 -8.890 8.108 -4.435 OA2 GGD 8
GGD OA4 OA4 O 0 1 N N N 22.746 93.876 20.466 -7.226 10.463 -7.627 OA4 GGD 9
GGD OA5 OA5 O 0 1 N N N 22.074 90.948 18.879 -6.542 7.708 -7.215 OA5 GGD 10
GGD OA6 OA6 O 0 1 N N N 25.327 92.169 18.567 -5.835 7.121 -9.799 OA6 GGD 11
GGD OB6 OB6 O 0 1 N N N 17.296 99.517 22.209 -10.862 11.314 -10.681 OB6 GGD 12
GGD CB1 CB1 C 0 1 N N S 19.165 95.176 20.954 -10.836 10.540 -6.719 CB1 GGD 13
GGD CB2 CB2 C 0 1 N N R 19.596 94.994 22.343 -11.683 11.316 -5.710 CB2 GGD 14
GGD CB3 CB3 C 0 1 N N S 18.713 95.793 23.297 -13.038 11.704 -6.302 CB3 GGD 15
GGD CB4 CB4 C 0 1 N N S 18.699 97.262 23.111 -12.876 12.342 -7.682 CB4 GGD 16
GGD CB5 CB5 C 0 1 N N R 18.160 97.473 21.634 -11.976 11.483 -8.575 CB5 GGD 17
GGD CB6 CB6 C 0 1 N N N 18.149 99.009 21.448 -11.705 12.157 -9.917 CB6 GGD 18
GGD OB1 OB1 O 0 1 N N N 20.082 94.401 20.232 -9.551 10.343 -6.148 OB1 GGD 19
GGD OB2 OB2 O 0 1 N N N 19.562 93.483 22.582 -11.890 10.518 -4.545 OB2 GGD 20
GGD OB3 OB3 O 0 1 N N N 19.158 95.605 24.571 -13.690 12.626 -5.428 OB3 GGD 21
GGD OB4 OB4 O 0 1 N N N 17.774 97.944 24.147 -14.157 12.475 -8.292 OB4 GGD 22
GGD OB5 OB5 O 0 1 N N N 19.202 96.685 20.733 -10.716 11.271 -7.937 OB5 GGD 23
GGD CC3 CC3 C 0 1 N N N 18.960 90.229 17.766 -5.611 5.785 -5.495 CC3 GGD 24
GGD CC4 CC4 C 0 1 N N N 18.497 90.999 16.563 -4.629 5.350 -4.412 CC4 GGD 25
GGD OC6 OC6 O 0 1 N N N 18.548 90.575 15.489 -5.366 5.011 -3.234 OC6 GGD 26
GGD CC5 CC5 C 0 1 N N N 18.958 89.349 14.753 -6.268 3.999 -3.377 CC5 GGD 27
GGD OC7 OC7 O 0 1 N N N 19.736 88.525 15.389 -6.178 3.057 -4.155 OC7 GGD 28
GGD CC6 CC6 C 0 1 N N N 18.010 92.280 16.945 -3.661 6.470 -4.056 CC6 GGD 29
GGD OC8 OC8 O 0 1 N N N 16.597 92.548 16.943 -2.790 6.018 -3.025 OC8 GGD 30
GGD CC7 CC7 C 0 1 N N N 15.827 93.619 17.238 -1.858 6.920 -2.595 CC7 GGD 31
GGD OC9 OC9 O 0 1 N N N 16.282 94.734 17.290 -1.713 8.060 -3.014 OC9 GGD 32
GGD C14 C14 C 0 1 N N N 18.422 89.104 13.406 -7.415 4.186 -2.413 C14 GGD 33
GGD C15 C15 C 0 1 N N N 18.448 88.016 12.204 -8.427 3.048 -2.517 C15 GGD 34
GGD C16 C16 C 0 1 N N N 17.449 88.099 11.008 -9.586 3.215 -1.532 C16 GGD 35
GGD C17 C17 C 0 1 N N N 17.588 86.853 10.079 -10.569 2.046 -1.621 C17 GGD 36
GGD C18 C18 C 0 1 N N N 16.589 86.872 8.891 -11.738 2.236 -0.654 C18 GGD 37
GGD C19 C19 C 0 1 N N N 16.698 85.505 8.067 -12.738 1.081 -0.755 C19 GGD 38
GGD C20 C20 C 0 1 N N N 16.602 85.626 6.609 -13.912 1.220 0.221 C20 GGD 39
GGD C21 C21 C 0 1 N N N 16.630 84.277 5.806 -14.985 0.133 0.093 C21 GGD 40
GGD C22 C22 C 0 1 N N N 16.717 82.929 6.443 -15.582 0.052 -1.283 C22 GGD 41
GGD C23 C23 C 0 1 N N N 16.122 82.548 5.181 -15.670 -1.030 -2.071 C23 GGD 42
GGD C24 C24 C 0 1 N N N 16.331 81.288 4.887 -16.269 -1.101 -3.446 C24 GGD 43
GGD C31 C31 C 0 1 N N N 14.251 93.613 17.558 -1.004 6.311 -1.509 C31 GGD 44
GGD C32 C32 C 0 1 N N N 13.062 92.703 17.683 0.025 7.298 -0.965 C32 GGD 45
GGD C33 C33 C 0 1 N N N 12.619 92.029 16.359 0.936 6.663 0.091 C33 GGD 46
GGD C34 C34 C 0 1 N N N 12.838 90.563 16.108 1.976 7.635 0.658 C34 GGD 47
GGD C35 C35 C 0 1 N N N 12.903 90.466 14.572 2.878 7.071 1.761 C35 GGD 48
GGD C36 C36 C 0 1 N N N 13.124 88.953 14.384 3.861 8.101 2.327 C36 GGD 49
GGD C37 C37 C 0 1 N N N 13.256 88.375 12.985 4.764 7.532 3.427 C37 GGD 50
GGD C38 C38 C 0 1 N N N 12.437 87.178 12.574 3.995 6.941 4.575 C38 GGD 51
GGD C39 C39 C 0 1 N N N 12.846 86.909 11.147 4.055 5.647 4.922 C39 GGD 52
GGD C40 C40 C 0 1 N N N 11.897 86.360 10.114 3.304 5.059 6.082 C40 GGD 53
GGD C41 C41 C 0 1 N N N 12.583 86.199 8.761 2.356 3.922 5.682 C41 GGD 54
GGD C42 C42 C 0 1 N N N 11.986 85.036 7.965 1.267 4.359 4.695 C42 GGD 55
GGD C43 C43 C 0 1 N N N 11.063 85.456 6.791 0.369 3.183 4.304 C43 GGD 56
GGD C44 C44 C 0 1 N N N 11.130 84.594 5.519 -0.683 3.542 3.250 C44 GGD 57
GGD C25 C25 C 0 1 N N N ? ? ? -15.269 -1.635 -4.471 C25 GGD 58
GGD C26 C26 C 0 1 N N N ? ? ? -14.044 -0.733 -4.657 C26 GGD 59
GGD C27 C27 C 0 1 N N N ? ? ? -14.319 0.677 -5.191 C27 GGD 60
GGD C28 C28 C 0 1 N N N ? ? ? -13.051 1.500 -5.431 C28 GGD 61
GGD C29 C29 C 0 1 N N N ? ? ? -13.385 2.862 -6.044 C29 GGD 62
GGD C30 C30 C 0 1 N N N ? ? ? -12.154 3.741 -6.274 C30 GGD 63
GGD C48 C48 C 0 1 N N N ? ? ? -12.487 5.103 -6.864 C48 GGD 64
GGD C45 C45 C 0 1 N N N ? ? ? -1.557 2.385 2.755 C45 GGD 65
GGD C46 C46 C 0 1 N N N ? ? ? -2.543 2.791 1.660 C46 GGD 66
GGD C47 C47 C 0 1 N N N ? ? ? -3.446 1.632 1.267 C47 GGD 67
GGD HA11 1HA1 H 0 0 N N N 20.396 91.639 17.875 -7.930 6.515 -6.263 HA11 GGD 68
GGD HA21 1HA2 H 0 0 N N N 20.622 92.075 20.965 -7.400 9.324 -5.111 HA21 GGD 69
GGD HA31 1HA3 H 0 0 N N N 20.565 93.733 18.191 -9.773 8.439 -6.829 HA31 GGD 70
GGD HA41 1HA4 H 0 0 N N N 22.627 94.208 18.402 -8.814 9.740 -8.687 HA41 GGD 71
GGD HA51 1HA5 H 0 0 N N N 23.074 92.391 17.619 -8.099 7.330 -8.517 HA51 GGD 72
GGD HA61 1HA6 H 0 0 N N N 24.303 92.074 20.326 -5.758 9.113 -9.311 HA61 GGD 73
GGD HA62 2HA6 H 0 0 N N N 24.288 90.583 19.304 -7.106 8.628 -10.372 HA62 GGD 74
GGD HO21 1HO2 H 0 0 N N N 18.563 92.222 20.991 -9.568 8.789 -4.307 HO21 GGD 75
GGD HO41 1HO4 H 0 0 N N N 23.692 93.960 20.458 -7.351 11.112 -8.335 HO41 GGD 76
GGD HO61 1HO6 H 0 0 N N N 25.070 92.280 17.659 -4.888 7.325 -9.878 HO61 GGD 77
GGD HO6 HO6 H 0 1 N N N 17.676 99.646 23.070 -10.427 11.874 -11.347 HO6 GGD 78
GGD HB11 1HB1 H 0 0 N N N 18.157 94.853 20.656 -11.264 9.549 -6.914 HB11 GGD 79
GGD HB21 1HB2 H 0 0 N N N 20.609 95.379 22.531 -11.147 12.214 -5.378 HB21 GGD 80
GGD HB31 1HB3 H 0 0 N N N 17.700 95.419 23.089 -13.698 10.830 -6.362 HB31 GGD 81
GGD HB41 1HB4 H 0 0 N N N 19.693 97.710 23.257 -12.454 13.349 -7.575 HB41 GGD 82
GGD HB51 1HB5 H 0 0 N N N 17.154 97.104 21.387 -12.448 10.513 -8.779 HB51 GGD 83
GGD HB61 1HB6 H 0 0 N N N 17.898 99.250 20.404 -11.210 13.115 -9.759 HB61 GGD 84
GGD HB62 2HB6 H 0 0 N N N 19.143 99.414 21.690 -12.642 12.311 -10.452 HB62 GGD 85
GGD HO2 HO2 H 0 1 N N N 19.555 93.030 21.747 -12.385 9.736 -4.833 HO2 GGD 86
GGD HO3 HO3 H 0 1 N N N 20.107 95.561 24.572 -14.642 12.490 -5.549 HO3 GGD 87
GGD HO4 HO4 H 0 1 N N N 18.252 98.084 24.956 -14.047 12.225 -9.223 HO4 GGD 88
GGD HC31 1HC3 H 0 0 N N N 19.249 89.306 17.242 -6.307 4.981 -5.753 HC31 GGD 89
GGD HC32 2HC3 H 0 0 N N N 18.241 90.778 18.392 -5.084 6.101 -6.401 HC32 GGD 90
GGD HC41 1HC4 H 0 0 N N N 18.418 90.839 15.478 -4.082 4.449 -4.713 HC41 GGD 91
GGD HC61 1HC6 H 0 0 N N N 18.347 92.437 17.980 -4.194 7.351 -3.683 HC61 GGD 92
GGD HC62 2HC6 H 0 0 N N N 18.399 92.947 16.162 -3.048 6.751 -4.918 HC62 GGD 93
GGD H141 1H14 H 0 0 N N N 17.345 89.113 13.628 -7.890 5.142 -2.659 H141 GGD 94
GGD H142 2H14 H 0 0 N N N 19.185 89.735 12.927 -7.038 4.278 -1.388 H142 GGD 95
GGD H151 1H15 H 0 0 N N N 19.451 88.090 11.758 -8.824 3.024 -3.539 H151 GGD 96
GGD H152 2H15 H 0 0 N N N 18.148 87.086 12.709 -7.930 2.086 -2.342 H152 GGD 97
GGD H161 1H16 H 0 0 N N N 16.422 88.140 11.401 -10.111 4.156 -1.737 H161 GGD 98
GGD H162 2H16 H 0 0 N N N 17.675 89.002 10.422 -9.198 3.277 -0.509 H162 GGD 99
GGD H171 1H17 H 0 0 N N N 18.610 86.837 9.672 -10.044 1.112 -1.387 H171 GGD 100
GGD H172 2H17 H 0 0 N N N 17.368 85.961 10.684 -10.950 1.957 -2.646 H172 GGD 101
GGD H181 1H18 H 0 0 N N N 15.565 86.984 9.278 -12.247 3.182 -0.877 H181 GGD 102
GGD H182 2H18 H 0 0 N N N 16.830 87.716 8.228 -11.351 2.318 0.366 H182 GGD 103
GGD H191 1H19 H 0 0 N N N 17.678 85.061 8.296 -12.226 0.125 -0.599 H191 GGD 104
GGD H192 2H19 H 0 0 N N N 15.835 84.897 8.376 -13.141 1.057 -1.775 H192 GGD 105
GGD H201 1H20 H 0 0 N N N 15.647 86.124 6.383 -13.526 1.216 1.248 H201 GGD 106
GGD H202 2H20 H 0 0 N N N 17.496 86.184 6.293 -14.376 2.203 0.070 H202 GGD 107
GGD H211 1H21 H 0 0 N N N 15.685 84.263 5.243 -14.598 -0.833 0.429 H211 GGD 108
GGD H212 2H21 H 0 0 N N N 17.604 84.343 5.299 -15.801 0.376 0.786 H212 GGD 109
GGD H221 1H22 H 0 0 N N N 17.050 82.475 7.365 -16.023 0.975 -1.655 H221 GGD 110
GGD H231 1H23 H 0 0 N N N 15.567 83.227 4.551 -15.288 -1.970 -1.677 H231 GGD 111
GGD H241 1H24 H 0 0 N N N 16.436 81.444 3.803 -16.645 -0.121 -3.747 H241 GGD 112
GGD H242 2H24 H 0 0 N N N 16.661 81.130 5.924 -17.147 -1.758 -3.405 H242 GGD 113
GGD H311 1H31 H 0 0 N N N 14.268 94.033 18.575 -0.506 5.428 -1.925 H311 GGD 114
GGD H312 2H31 H 0 0 N N N 13.990 93.894 16.527 -1.661 5.951 -0.708 H312 GGD 115
GGD H321 1H32 H 0 0 N N N 13.323 91.906 18.394 -0.489 8.169 -0.545 H321 GGD 116
GGD H322 2H32 H 0 0 N N N 12.221 93.330 18.012 0.641 7.658 -1.798 H322 GGD 117
GGD H331 1H33 H 0 0 N N N 11.531 92.180 16.300 1.472 5.820 -0.363 H331 GGD 118
GGD H332 2H33 H 0 0 N N N 13.275 92.503 15.614 0.339 6.242 0.907 H332 GGD 119
GGD H341 1H34 H 0 0 N N N 13.769 90.209 16.574 2.606 7.989 -0.168 H341 GGD 120
GGD H342 2H34 H 0 0 N N N 12.046 89.934 16.541 1.459 8.520 1.051 H342 GGD 121
GGD H351 1H35 H 0 0 N N N 11.979 90.818 14.090 2.234 6.709 2.572 H351 GGD 122
GGD H352 2H35 H 0 0 N N N 13.679 91.096 14.113 3.416 6.194 1.384 H352 GGD 123
GGD H361 1H36 H 0 0 N N N 14.064 88.715 14.903 4.485 8.513 1.526 H361 GGD 124
GGD H362 2H36 H 0 0 N N N 12.194 88.505 14.765 3.291 8.938 2.750 H362 GGD 125
GGD H371 1H37 H 0 0 N N N 12.976 89.185 12.295 5.427 8.316 3.812 H371 GGD 126
GGD H372 2H37 H 0 0 N N N 14.289 87.998 12.961 5.415 6.770 2.979 H372 GGD 127
GGD H381 1H38 H 0 0 N N N 11.718 86.634 13.169 3.373 7.618 5.154 H381 GGD 128
GGD H391 1H39 H 0 0 N N N 13.864 87.119 10.853 4.694 4.976 4.355 H391 GGD 129
GGD H401 1H40 H 0 0 N N N 11.537 85.376 10.449 2.715 5.837 6.584 H401 GGD 130
GGD H402 2H40 H 0 0 N N N 11.061 87.066 9.999 4.027 4.694 6.820 H402 GGD 131
GGD H411 1H41 H 0 0 N N N 12.453 87.127 8.185 2.955 3.127 5.222 H411 GGD 132
GGD H412 2H41 H 0 0 N N N 13.648 85.989 8.936 1.891 3.491 6.577 H412 GGD 133
GGD H421 1H42 H 0 0 N N N 12.820 84.455 7.544 0.661 5.150 5.147 H421 GGD 134
GGD H422 2H42 H 0 0 N N N 11.359 84.466 8.667 1.734 4.777 3.795 H422 GGD 135
GGD H431 1H43 H 0 0 N N N 10.028 85.410 7.160 -0.118 2.773 5.196 H431 GGD 136
GGD H432 2H43 H 0 0 N N N 11.409 86.455 6.488 0.992 2.376 3.898 H432 GGD 137
GGD H441 1H44 H 0 0 N N N 10.341 85.009 4.875 -1.340 4.321 3.657 H441 GGD 138
GGD H442 2H44 H 0 0 N N N 12.207 84.657 5.305 -0.171 3.991 2.390 H442 GGD 139
GGD H251 1H25 H 0 0 N N N ? ? ? -14.945 -2.644 -4.189 H251 GGD 140
GGD H252 2H25 H 0 0 N N N ? ? ? -15.766 -1.738 -5.445 H252 GGD 141
GGD H261 1H26 H 0 0 N N N ? ? ? -13.531 -0.650 -3.691 H261 GGD 142
GGD H262 2H26 H 0 0 N N N ? ? ? -13.340 -1.228 -5.337 H262 GGD 143
GGD H271 1H27 H 0 0 N N N ? ? ? -14.984 1.214 -4.505 H271 GGD 144
GGD H272 2H27 H 0 0 N N N ? ? ? -14.870 0.579 -6.136 H272 GGD 145
GGD H281 1H28 H 0 0 N N N ? ? ? -12.376 0.953 -6.100 H281 GGD 146
GGD H282 2H28 H 0 0 N N N ? ? ? -12.526 1.642 -4.483 H282 GGD 147
GGD H291 1H29 H 0 0 N N N ? ? ? -13.880 2.704 -7.010 H291 GGD 148
GGD H292 2H29 H 0 0 N N N ? ? ? -14.100 3.394 -5.406 H292 GGD 149
GGD H301 1H30 H 0 0 N N N ? ? ? -11.481 3.220 -6.965 H301 GGD 150
GGD H302 2H30 H 0 0 N N N ? ? ? -11.605 3.872 -5.334 H302 GGD 151
GGD H481 1H48 H 0 0 N N N ? ? ? -13.071 5.713 -6.170 H481 GGD 152
GGD H482 2H48 H 0 0 N N N ? ? ? -13.053 4.999 -7.795 H482 GGD 153
GGD H483 3H48 H 0 0 N N N ? ? ? -11.565 5.649 -7.089 H483 GGD 154
GGD H451 1H45 H 0 0 N N N ? ? ? -0.925 1.563 2.400 H451 GGD 155
GGD H452 2H45 H 0 0 N N N ? ? ? -2.116 1.992 3.613 H452 GGD 156
GGD H461 1H46 H 0 0 N N N ? ? ? -2.003 3.129 0.770 H461 GGD 157
GGD H462 2H46 H 0 0 N N N ? ? ? -3.161 3.628 2.006 H462 GGD 158
GGD H471 1H47 H 0 0 N N N ? ? ? -4.035 1.285 2.121 H471 GGD 159
GGD H472 2H47 H 0 0 N N N ? ? ? -4.139 1.943 0.479 H472 GGD 160
GGD H473 3H47 H 0 0 N N N ? ? ? -2.858 0.789 0.889 H473 GGD 161
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GGD CA1 CA2 SING N N 1
GGD CA1 OA1 SING N N 2
GGD CA1 OA5 SING N N 3
GGD CA1 HA11 SING N N 4
GGD CA2 CA3 SING N N 5
GGD CA2 OA2 SING N N 6
GGD CA2 HA21 SING N N 7
GGD CA3 CA4 SING N N 8
GGD CA3 OB1 SING N N 9
GGD CA3 HA31 SING N N 10
GGD CA4 CA5 SING N N 11
GGD CA4 OA4 SING N N 12
GGD CA4 HA41 SING N N 13
GGD CA5 CA6 SING N N 14
GGD CA5 OA5 SING N N 15
GGD CA5 HA51 SING N N 16
GGD CA6 OA6 SING N N 17
GGD CA6 HA61 SING N N 18
GGD CA6 HA62 SING N N 19
GGD OA1 CC3 SING N N 20
GGD OA2 HO21 SING N N 21
GGD OA4 HO41 SING N N 22
GGD OA6 HO61 SING N N 23
GGD OB6 CB6 SING N N 24
GGD OB6 HO6 SING N N 25
GGD CB1 CB2 SING N N 26
GGD CB1 OB1 SING N N 27
GGD CB1 OB5 SING N N 28
GGD CB1 HB11 SING N N 29
GGD CB2 CB3 SING N N 30
GGD CB2 OB2 SING N N 31
GGD CB2 HB21 SING N N 32
GGD CB3 CB4 SING N N 33
GGD CB3 OB3 SING N N 34
GGD CB3 HB31 SING N N 35
GGD CB4 CB5 SING N N 36
GGD CB4 OB4 SING N N 37
GGD CB4 HB41 SING N N 38
GGD CB5 CB6 SING N N 39
GGD CB5 OB5 SING N N 40
GGD CB5 HB51 SING N N 41
GGD CB6 HB61 SING N N 42
GGD CB6 HB62 SING N N 43
GGD OB2 HO2 SING N N 44
GGD OB3 HO3 SING N N 45
GGD OB4 HO4 SING N N 46
GGD CC3 CC4 SING N N 47
GGD CC3 HC31 SING N N 48
GGD CC3 HC32 SING N N 49
GGD CC4 OC6 SING N N 50
GGD CC4 CC6 SING N N 51
GGD CC4 HC41 SING N N 52
GGD OC6 CC5 SING N N 53
GGD CC5 OC7 DOUB N N 54
GGD CC5 C14 SING N N 55
GGD CC6 OC8 SING N N 56
GGD CC6 HC61 SING N N 57
GGD CC6 HC62 SING N N 58
GGD OC8 CC7 SING N N 59
GGD CC7 OC9 DOUB N N 60
GGD CC7 C31 SING N N 61
GGD C14 C15 SING N N 62
GGD C14 H141 SING N N 63
GGD C14 H142 SING N N 64
GGD C15 C16 SING N N 65
GGD C15 H151 SING N N 66
GGD C15 H152 SING N N 67
GGD C16 C17 SING N N 68
GGD C16 H161 SING N N 69
GGD C16 H162 SING N N 70
GGD C17 C18 SING N N 71
GGD C17 H171 SING N N 72
GGD C17 H172 SING N N 73
GGD C18 C19 SING N N 74
GGD C18 H181 SING N N 75
GGD C18 H182 SING N N 76
GGD C19 C20 SING N N 77
GGD C19 H191 SING N N 78
GGD C19 H192 SING N N 79
GGD C20 C21 SING N N 80
GGD C20 H201 SING N N 81
GGD C20 H202 SING N N 82
GGD C21 C22 SING N N 83
GGD C21 H211 SING N N 84
GGD C21 H212 SING N N 85
GGD C22 C23 DOUB N N 86
GGD C22 H221 SING N N 87
GGD C23 C24 SING N N 88
GGD C23 H231 SING N N 89
GGD C24 C25 SING N N 90
GGD C24 H241 SING N N 91
GGD C24 H242 SING N N 92
GGD C31 C32 SING N N 93
GGD C31 H311 SING N N 94
GGD C31 H312 SING N N 95
GGD C32 C33 SING N N 96
GGD C32 H321 SING N N 97
GGD C32 H322 SING N N 98
GGD C33 C34 SING N N 99
GGD C33 H331 SING N N 100
GGD C33 H332 SING N N 101
GGD C34 C35 SING N N 102
GGD C34 H341 SING N N 103
GGD C34 H342 SING N N 104
GGD C35 C36 SING N N 105
GGD C35 H351 SING N N 106
GGD C35 H352 SING N N 107
GGD C36 C37 SING N N 108
GGD C36 H361 SING N N 109
GGD C36 H362 SING N N 110
GGD C37 C38 SING N N 111
GGD C37 H371 SING N N 112
GGD C37 H372 SING N N 113
GGD C38 C39 DOUB N N 114
GGD C38 H381 SING N N 115
GGD C39 C40 SING N N 116
GGD C39 H391 SING N N 117
GGD C40 C41 SING N N 118
GGD C40 H401 SING N N 119
GGD C40 H402 SING N N 120
GGD C41 C42 SING N N 121
GGD C41 H411 SING N N 122
GGD C41 H412 SING N N 123
GGD C42 C43 SING N N 124
GGD C42 H421 SING N N 125
GGD C42 H422 SING N N 126
GGD C43 C44 SING N N 127
GGD C43 H431 SING N N 128
GGD C43 H432 SING N N 129
GGD C44 C45 SING N N 130
GGD C44 H441 SING N N 131
GGD C44 H442 SING N N 132
GGD C25 C26 SING N N 133
GGD C25 H251 SING N N 134
GGD C25 H252 SING N N 135
GGD C26 C27 SING N N 136
GGD C26 H261 SING N N 137
GGD C26 H262 SING N N 138
GGD C27 C28 SING N N 139
GGD C27 H271 SING N N 140
GGD C27 H272 SING N N 141
GGD C28 C29 SING N N 142
GGD C28 H281 SING N N 143
GGD C28 H282 SING N N 144
GGD C29 C30 SING N N 145
GGD C29 H291 SING N N 146
GGD C29 H292 SING N N 147
GGD C30 C48 SING N N 148
GGD C30 H301 SING N N 149
GGD C30 H302 SING N N 150
GGD C48 H481 SING N N 151
GGD C48 H482 SING N N 152
GGD C48 H483 SING N N 153
GGD C45 C46 SING N N 154
GGD C45 H451 SING N N 155
GGD C45 H452 SING N N 156
GGD C46 C47 SING N N 157
GGD C46 H461 SING N N 158
GGD C46 H462 SING N N 159
GGD C47 H471 SING N N 160
GGD C47 H472 SING N N 161
GGD C47 H473 SING N N 162
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GGD SMILES ACDLabs 10.04 "O=C(OCC(OC(=O)CCCCCCCC/C=C/CCCCCCCC)COC2OC(CO)C(O)C(OC1OC(C(O)C(O)C1O)CO)C2O)CCCCCCC/C=C/CCCCCCCC"
GGD SMILES_CANONICAL CACTVS 3.341 "CCCCCCCC/C=C/CCCCCCCCC(=O)O[C@@H](CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H]1O)COC(=O)CCCCCCC\C=C\CCCCCCCC"
GGD SMILES CACTVS 3.341 "CCCCCCCCC=CCCCCCCCCC(=O)O[CH](CO[CH]1O[CH](CO)[CH](O)[CH](O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)[CH]1O)COC(=O)CCCCCCCC=CCCCCCCCC"
GGD SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCCCCC=CCCCCCCCCC(=O)OC(CO[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)COC(=O)CCCCCCCC=CCCCCCCCC"
GGD SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCCCCC=CCCCCCCCCC(=O)OC(COC1C(C(C(C(O1)CO)O)OC2C(C(C(C(O2)CO)O)O)O)O)COC(=O)CCCCCCCC=CCCCCCCCC"
GGD InChI InChI 1.03 "InChI=1S/C52H94O15/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-44(56)64-40(38-62-43(55)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2)39-63-51-49(61)50(46(58)42(37-54)65-51)67-52-48(60)47(59)45(57)41(36-53)66-52/h17-20,40-42,45-54,57-61H,3-16,21-39H2,1-2H3/b19-17+,20-18+/t40?,41-,42-,45-,46+,47+,48-,49-,50+,51-,52+/m1/s1"
GGD InChIKey InChI 1.03 OGKQOSUHVSQNSH-IQXSWRQFSA-N
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GGD "SYSTEMATIC NAME" ACDLabs 10.04 "(1S)-2-[(3-O-beta-D-glucopyranosyl-beta-D-galactopyranosyl)oxy]-1-{[(9E)-octadec-9-enoyloxy]methyl}ethyl (10E)-nonadec-10-enoate"
GGD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[1-[(2R,3R,4S,5S,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-oxan-2-yl]oxy-3-octadec-9-enoyloxy-propan-2-yl] nonadec-10-enoate"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GGD "Create component" 2002-07-25 RCSB
GGD "Modify descriptor" 2011-06-04 RCSB
GGD "Modify synonyms" 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id GGD
_pdbx_chem_comp_synonyms.name "GLUCOSYL-GALACTOSYL DIACYL-GLYCEROL"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
##