data_GGZ # _chem_comp.id GGZ _chem_comp.name "(2S,3AR,4R,6R,6AR)-4-(6-AMINO-9H-PURIN-9-YL)-6-({[(R)-HYDROXY(SULFOOXY)PHOSPHORYL]OXY}METHYL)TETRAHYDROFURO[3,4-D][1,3,2]DIOXAPHOSPHOL-2-OL 2-OXIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 N5 O12 P2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-04-05 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 489.249 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GGZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye OEToolkits" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GGZ C2 C2 C 0 1 Y N N 20.583 -8.082 20.910 2.000 1.980 -3.099 C2 GGZ 1 GGZ C4 C4 C 0 1 Y N N 19.377 -9.789 19.917 2.272 1.694 -0.923 C4 GGZ 2 GGZ C5 C5 C 0 1 Y N N 20.551 -10.615 19.872 2.579 3.031 -0.728 C5 GGZ 3 GGZ C6 C6 C 0 1 Y N N 21.724 -10.065 20.392 2.576 3.847 -1.855 C6 GGZ 4 GGZ C8 C8 C 0 1 N N N 19.051 -11.490 19.135 2.685 2.121 1.196 C8 GGZ 5 GGZ N1 N1 N 0 1 Y N N 21.713 -8.815 20.913 2.280 3.305 -3.061 N1 GGZ 6 GGZ O3P O3P O 0 1 N N N 13.979 -8.387 22.363 -2.100 -2.246 0.247 O3P GGZ 7 GGZ P1 P1 P 0 1 N N N 14.058 -8.885 20.935 -0.622 -2.846 0.504 P1 GGZ 8 GGZ "O2'" O2* O 0 1 N N N 15.286 -9.929 20.834 0.175 -1.634 1.233 "O2'" GGZ 9 GGZ O1P O1P O 0 1 N N N 12.868 -9.431 20.201 -0.570 -4.178 1.189 O1P GGZ 10 GGZ "O3'" O3* O 0 1 N N N 14.723 -7.773 19.995 0.090 -2.760 -0.953 "O3'" GGZ 11 GGZ "C3'" C3* C 0 1 N N N 16.095 -8.013 19.741 1.038 -1.695 -0.957 "C3'" GGZ 12 GGZ "C4'" C4* C 0 1 N N N 16.380 -8.093 18.261 2.438 -2.191 -0.636 "C4'" GGZ 13 GGZ "C5'" C5* C 0 1 N N N 17.402 -6.993 18.052 3.219 -2.615 -1.866 "C5'" GGZ 14 GGZ "O5'" O5* O 0 1 N N N 17.666 -6.969 16.666 4.506 -3.047 -1.460 "O5'" GGZ 15 GGZ P2 P2 P 0 1 N N N 17.984 -5.560 15.973 5.802 -2.270 -2.042 P2 GGZ 16 GGZ O4P O4P O 0 1 N N N 18.019 -5.713 14.482 7.142 -2.767 -1.581 O4P GGZ 17 GGZ O5P O5P O 0 1 N N N 17.108 -4.492 16.590 5.592 -2.322 -3.647 O5P GGZ 18 GGZ O6P O6P O 0 1 N N N 19.477 -5.363 16.515 5.448 -0.730 -1.683 O6P GGZ 19 GGZ S2 S2 S 0 1 N N N 20.551 -4.316 15.890 6.480 0.369 -2.310 S2 GGZ 20 GGZ OS3 OS3 O 0 1 N N N 19.817 -3.103 15.566 6.469 0.253 -3.756 OS3 GGZ 21 GGZ OS2 OS2 O 0 1 N N N 21.548 -4.157 16.982 5.766 1.784 -1.928 OS2 GGZ 22 GGZ OS1 OS1 O 0 1 N N N 21.105 -4.996 14.717 7.728 0.299 -1.572 OS1 GGZ 23 GGZ "C2'" C2* C 0 1 N N N 16.458 -9.382 20.284 0.735 -0.780 0.222 "C2'" GGZ 24 GGZ "C1'" C1* C 0 1 N N N 16.959 -10.208 19.122 2.104 -0.277 0.656 "C1'" GGZ 25 GGZ "O4'" O4* O 0 1 N N N 16.942 -9.385 17.956 3.100 -1.090 0.003 "O4'" GGZ 26 GGZ N9 N9 N 0 1 N N N 18.366 -10.488 19.400 2.344 1.125 0.318 N9 GGZ 27 GGZ N7 N7 N 0 1 N N N 20.256 -11.840 19.303 2.834 3.283 0.596 N7 GGZ 28 GGZ N6 N6 N 0 1 N N N 22.900 -10.730 20.415 2.876 5.217 -1.750 N6 GGZ 29 GGZ N3 N3 N 0 1 Y N N 19.409 -8.536 20.435 1.971 1.091 -2.082 N3 GGZ 30 GGZ H2 H2 H 0 1 N N N 20.621 -7.079 21.309 1.767 1.579 -4.079 H2 GGZ 31 GGZ H8 H8 H 0 1 N N N 18.474 -12.254 18.636 2.809 1.939 2.255 H8 GGZ 32 GGZ HO3P HO3P H 0 0 N N N 13.962 -9.128 22.957 -2.836 -2.538 0.826 HO3P GGZ 33 GGZ "H3'" H3* H 0 1 N N N 16.661 -7.191 20.204 1.001 -1.148 -1.905 "H3'" GGZ 34 GGZ "H4'" H4* H 0 1 N N N 15.493 -7.974 17.621 2.416 -3.031 0.069 "H4'" GGZ 35 GGZ "H5'1" 1H5* H 0 0 N N N 17.004 -6.024 18.389 3.325 -1.773 -2.553 "H5'1" GGZ 36 GGZ "H5'2" 2H5* H 0 0 N N N 18.318 -7.179 18.633 2.708 -3.436 -2.372 "H5'2" GGZ 37 GGZ HO5P HO5P H 0 0 N N N 16.924 -4.716 17.495 6.301 -1.975 -4.229 HO5P GGZ 38 GGZ HOS2 HOS2 H 0 0 N N N 22.422 -4.123 16.611 5.454 1.861 -0.996 HOS2 GGZ 39 GGZ "H2'" H2* H 0 1 N N N 17.239 -9.347 21.058 0.002 0.002 -0.001 "H2'" GGZ 40 GGZ "H1'" H1* H 0 1 N N N 16.355 -11.117 18.983 2.255 -0.346 1.738 "H1'" GGZ 41 GGZ HN61 1HN6 H 0 0 N N N 23.609 -10.158 20.827 3.501 5.531 -1.032 HN61 GGZ 42 GGZ HN62 2HN6 H 0 0 N N N 23.041 -11.658 20.070 2.390 5.873 -2.331 HN62 GGZ 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GGZ C2 N3 DOUB Y N 1 GGZ C2 N1 SING Y N 2 GGZ C2 H2 SING N N 3 GGZ C4 N9 SING N N 4 GGZ C4 C5 DOUB Y N 5 GGZ C4 N3 SING Y N 6 GGZ C5 N7 SING N N 7 GGZ C5 C6 SING Y N 8 GGZ C6 N6 SING N N 9 GGZ C6 N1 DOUB Y N 10 GGZ C8 N7 DOUB N N 11 GGZ C8 N9 SING N N 12 GGZ C8 H8 SING N N 13 GGZ O3P P1 SING N N 14 GGZ O3P HO3P SING N N 15 GGZ P1 "O3'" SING N N 16 GGZ P1 O1P DOUB N N 17 GGZ P1 "O2'" SING N N 18 GGZ "O2'" "C2'" SING N N 19 GGZ "O3'" "C3'" SING N N 20 GGZ "C3'" "C4'" SING N N 21 GGZ "C3'" "C2'" SING N N 22 GGZ "C3'" "H3'" SING N N 23 GGZ "C4'" "O4'" SING N N 24 GGZ "C4'" "C5'" SING N N 25 GGZ "C4'" "H4'" SING N N 26 GGZ "C5'" "O5'" SING N N 27 GGZ "C5'" "H5'1" SING N N 28 GGZ "C5'" "H5'2" SING N N 29 GGZ "O5'" P2 SING N N 30 GGZ P2 O4P DOUB N N 31 GGZ P2 O6P SING N N 32 GGZ P2 O5P SING N N 33 GGZ O5P HO5P SING N N 34 GGZ O6P S2 SING N N 35 GGZ S2 OS1 DOUB N N 36 GGZ S2 OS3 DOUB N N 37 GGZ S2 OS2 SING N N 38 GGZ OS2 HOS2 SING N N 39 GGZ "C2'" "C1'" SING N N 40 GGZ "C2'" "H2'" SING N N 41 GGZ "C1'" "O4'" SING N N 42 GGZ "C1'" N9 SING N N 43 GGZ "C1'" "H1'" SING N N 44 GGZ N6 HN61 SING N N 45 GGZ N6 HN62 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GGZ SMILES ACDLabs 10.04 "O=P3(OC4C(OC(n1c2ncnc(N)c2nc1)C4O3)COP(=O)(O)OS(=O)(=O)O)O" GGZ SMILES_CANONICAL CACTVS 3.341 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[S](O)(=O)=O)[C@H]4O[P@@](O)(=O)O[C@@H]34" GGZ SMILES CACTVS 3.341 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[S](O)(=O)=O)[CH]4O[P](O)(=O)O[CH]34" GGZ SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@H]4[C@@H]([C@H](O3)CO[P@@](=O)(O)OS(=O)(=O)O)O[P@@](=O)(O4)O)N" GGZ SMILES "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C4C(C(O3)COP(=O)(O)OS(=O)(=O)O)OP(=O)(O4)O)N" GGZ InChI InChI 1.03 "InChI=1S/C10H13N5O12P2S/c11-8-5-9(13-2-12-8)15(3-14-5)10-7-6(25-29(18,19)26-7)4(24-10)1-23-28(16,17)27-30(20,21)22/h2-4,6-7,10H,1H2,(H,16,17)(H,18,19)(H2,11,12,13)(H,20,21,22)/t4-,6-,7-,10-/m1/s1" GGZ InChIKey InChI 1.03 BOTWXJFMSRDLBQ-KQYNXXCUSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GGZ "SYSTEMATIC NAME" ACDLabs 10.04 "(2S,3aR,4R,6R,6aR)-4-(6-amino-9H-purin-9-yl)-6-({[(R)-hydroxy(sulfooxy)phosphoryl]oxy}methyl)tetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-2-ol 2-oxide" GGZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(1R,2R,4R,5R,7S)-4-(6-aminopurin-9-yl)-7-hydroxy-7-oxo-3,6,8-trioxa-7$l^{5}-phosphabicyclo[3.3.0]octan-2-yl]methyl sulfo hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GGZ "Create component" 2007-04-05 PDBJ GGZ "Modify descriptor" 2011-06-04 RCSB #