data_GHZ
#
_chem_comp.id GHZ
_chem_comp.name "2-methylpropyl N-[(2S)-1-oxidanylidene-1-[[(2S)-1-oxidanyl-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-3-phenyl-propan-2-yl]carbamate"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H31 N3 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-08-15
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 405.488
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code GHZ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5C20
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GHZ O25 O1 O 0 1 N N N N N N -6.981 5.641 2.091 0.989 -2.325 0.718 O25 GHZ 1
GHZ C23 C1 C 0 1 N N N N N N -7.326 6.808 1.994 1.135 -1.131 0.565 C23 GHZ 2
GHZ C15 C2 C 0 1 N N S N N N -8.002 7.125 0.712 -0.063 -0.250 0.319 C15 GHZ 3
GHZ C16 C3 C 0 1 N N N N N N -9.251 6.233 0.708 -0.163 0.797 1.430 C16 GHZ 4
GHZ C17 C4 C 0 1 Y N N N N N -10.421 6.878 0.013 -1.286 1.753 1.119 C17 GHZ 5
GHZ C22 C5 C 0 1 Y N N N N N -10.463 8.259 -0.193 -2.565 1.487 1.572 C22 GHZ 6
GHZ C21 C6 C 0 1 Y N N N N N -11.561 8.834 -0.843 -3.595 2.363 1.287 C21 GHZ 7
GHZ C20 C7 C 0 1 Y N N N N N -12.619 8.042 -1.289 -3.347 3.505 0.549 C20 GHZ 8
GHZ C19 C8 C 0 1 Y N N N N N -12.579 6.662 -1.077 -2.069 3.771 0.096 C19 GHZ 9
GHZ C18 C9 C 0 1 Y N N N N N -11.483 6.078 -0.426 -1.037 2.898 0.386 C18 GHZ 10
GHZ N13 N1 N 0 1 N N N N N N -7.272 6.735 -0.495 -1.277 -1.070 0.310 N13 GHZ 11
GHZ C12 C10 C 0 1 N N N N N N -6.013 7.074 -0.851 -2.368 -0.650 -0.362 C12 GHZ 12
GHZ O11 O2 O 0 1 N N N N N N -5.524 6.536 -2.140 -3.484 -1.403 -0.370 O11 GHZ 13
GHZ C10 C11 C 0 1 N N N N N N -4.255 6.842 -2.757 -4.620 -0.889 -1.114 C10 GHZ 14
GHZ C1 C12 C 0 1 N N N N N N -4.454 7.758 -3.984 -5.786 -1.875 -1.009 C1 GHZ 15
GHZ O14 O3 O 0 1 N N N N N N -5.267 7.794 -0.175 -2.344 0.407 -0.959 O14 GHZ 16
GHZ N24 N2 N 0 1 N N N N N N -7.174 7.735 2.874 2.369 -0.590 0.621 N24 GHZ 17
GHZ C26 C13 C 0 1 N N S N N N -6.541 7.490 4.185 3.533 -1.445 0.867 C26 GHZ 18
GHZ C27 C14 C 0 1 N N N N N N -7.705 7.649 5.187 3.711 -1.644 2.373 C27 GHZ 19
GHZ O28 O4 O 0 1 N N N N N N -7.333 7.033 6.414 4.026 -0.391 2.985 O28 GHZ 20
GHZ C29 C15 C 0 1 N N N N N N -5.289 8.381 4.377 4.784 -0.781 0.288 C29 GHZ 21
GHZ C30 C16 C 0 1 N N S N N N -4.311 8.327 3.177 4.658 -0.695 -1.234 C30 GHZ 22
GHZ C31 C17 C 0 1 N N N N N N -3.415 7.075 3.174 5.926 -0.055 -1.846 C31 GHZ 23
GHZ C32 C18 C 0 1 N N N N N N -1.969 7.535 3.226 5.516 1.431 -1.936 C32 GHZ 24
GHZ N33 N3 N 0 1 N N N N N N -2.132 8.968 3.280 4.050 1.429 -2.015 N33 GHZ 25
GHZ C34 C19 C 0 1 N N N N N N -3.300 9.427 3.279 3.542 0.249 -1.621 C34 GHZ 26
GHZ O1 O5 O 0 1 N N N N N N -3.578 10.729 3.353 2.360 -0.020 -1.582 O1 GHZ 27
GHZ C2 C20 C 0 1 N N N N N N -3.920 9.162 -3.711 -6.257 -1.955 0.445 C2 GHZ 28
GHZ C3 C21 C 0 1 N N N N N N -3.846 7.215 -5.282 -6.940 -1.395 -1.892 C3 GHZ 29
GHZ H1 H1 H 0 1 N N N N N N -8.294 8.185 0.675 0.045 0.250 -0.643 H1 GHZ 30
GHZ H2 H2 H 0 1 N N N N N N -9.534 6.019 1.749 -0.360 0.301 2.380 H2 GHZ 31
GHZ H3 H3 H 0 1 N N N N N N -9.010 5.292 0.192 0.775 1.348 1.495 H3 GHZ 32
GHZ H4 H4 H 0 1 N N N N N N -9.650 8.882 0.149 -2.759 0.594 2.149 H4 GHZ 33
GHZ H5 H5 H 0 1 N N N N N N -11.589 9.902 -1.001 -4.595 2.155 1.641 H5 GHZ 34
GHZ H6 H6 H 0 1 N N N N N N -13.461 8.492 -1.794 -4.153 4.187 0.322 H6 GHZ 35
GHZ H7 H7 H 0 1 N N N N N N -13.396 6.042 -1.416 -1.875 4.663 -0.480 H7 GHZ 36
GHZ H8 H8 H 0 1 N N N N N N -11.458 5.011 -0.263 -0.038 3.106 0.033 H8 GHZ 37
GHZ H9 H9 H 0 1 N N N N N N -7.765 6.145 -1.135 -1.296 -1.914 0.787 H9 GHZ 38
GHZ H10 H10 H 0 1 N N N N N N -3.774 5.906 -3.079 -4.920 0.073 -0.700 H10 GHZ 39
GHZ H11 H11 H 0 1 N N N N N N -3.611 7.352 -2.026 -4.343 -0.765 -2.160 H11 GHZ 40
GHZ H12 H12 H 0 1 N N N N N N -5.538 7.848 -4.146 -5.460 -2.860 -1.340 H12 GHZ 41
GHZ H13 H13 H 0 1 N N N N N N -7.497 8.657 2.661 2.486 0.365 0.499 H13 GHZ 42
GHZ H14 H14 H 0 1 N N N N N N -6.211 6.441 4.222 3.380 -2.412 0.388 H14 GHZ 43
GHZ H15 H15 H 0 1 N N N N N N -7.907 8.717 5.355 2.787 -2.034 2.800 H15 GHZ 44
GHZ H16 H16 H 0 1 N N N N N N -8.608 7.164 4.787 4.522 -2.350 2.553 H16 GHZ 45
GHZ H17 H17 H 0 1 N N N N N N -8.041 7.123 7.041 4.153 -0.442 3.942 H17 GHZ 46
GHZ H18 H18 H 0 1 N N N N N N -4.755 8.044 5.278 4.887 0.222 0.701 H18 GHZ 47
GHZ H19 H19 H 0 1 N N N N N N -5.618 9.422 4.513 5.662 -1.372 0.548 H19 GHZ 48
GHZ H20 H20 H 0 1 N N N N N N -4.869 8.396 2.232 4.485 -1.685 -1.658 H20 GHZ 49
GHZ H21 H21 H 0 1 N N N N N N -3.641 6.452 4.052 6.785 -0.184 -1.188 H21 GHZ 50
GHZ H22 H22 H 0 1 N N N N N N -3.589 6.493 2.257 6.130 -0.464 -2.836 H22 GHZ 51
GHZ H23 H23 H 0 1 N N N N N N -1.457 7.154 4.122 5.845 1.968 -1.046 H23 GHZ 52
GHZ H24 H24 H 0 1 N N N N N N -4.359 9.547 -2.779 -6.583 -0.970 0.776 H24 GHZ 53
GHZ H25 H25 H 0 1 N N N N N N -2.825 9.125 -3.612 -7.087 -2.657 0.520 H25 GHZ 54
GHZ H26 H26 H 0 1 N N N N N N -4.191 9.826 -4.545 -5.435 -2.297 1.074 H26 GHZ 55
GHZ H27 H27 H 0 1 N N N N N N -4.234 6.204 -5.474 -7.266 -0.410 -1.561 H27 GHZ 56
GHZ H28 H28 H 0 1 N N N N N N -4.117 7.876 -6.118 -6.605 -1.338 -2.928 H28 GHZ 57
GHZ H29 H29 H 0 1 N N N N N N -2.751 7.176 -5.185 -7.770 -2.097 -1.818 H29 GHZ 58
GHZ H30 H30 H 0 1 N N N N N N -1.415 7.226 2.327 5.941 1.887 -2.831 H30 GHZ 59
GHZ H31 H31 H 0 1 N N N N N N -1.339 9.576 3.317 3.517 2.183 -2.313 H31 GHZ 60
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GHZ C3 C1 SING N N 1
GHZ C1 C2 SING N N 2
GHZ C1 C10 SING N N 3
GHZ C10 O11 SING N N 4
GHZ O11 C12 SING N N 5
GHZ C20 C19 DOUB Y N 6
GHZ C20 C21 SING Y N 7
GHZ C19 C18 SING Y N 8
GHZ C12 N13 SING N N 9
GHZ C12 O14 DOUB N N 10
GHZ C21 C22 DOUB Y N 11
GHZ N13 C15 SING N N 12
GHZ C18 C17 DOUB Y N 13
GHZ C22 C17 SING Y N 14
GHZ C17 C16 SING N N 15
GHZ C16 C15 SING N N 16
GHZ C15 C23 SING N N 17
GHZ C23 O25 DOUB N N 18
GHZ C23 N24 SING N N 19
GHZ N24 C26 SING N N 20
GHZ C31 C30 SING N N 21
GHZ C31 C32 SING N N 22
GHZ C30 C34 SING N N 23
GHZ C30 C29 SING N N 24
GHZ C32 N33 SING N N 25
GHZ C34 N33 SING N N 26
GHZ C34 O1 DOUB N N 27
GHZ C26 C29 SING N N 28
GHZ C26 C27 SING N N 29
GHZ C27 O28 SING N N 30
GHZ C15 H1 SING N N 31
GHZ C16 H2 SING N N 32
GHZ C16 H3 SING N N 33
GHZ C22 H4 SING N N 34
GHZ C21 H5 SING N N 35
GHZ C20 H6 SING N N 36
GHZ C19 H7 SING N N 37
GHZ C18 H8 SING N N 38
GHZ N13 H9 SING N N 39
GHZ C10 H10 SING N N 40
GHZ C10 H11 SING N N 41
GHZ C1 H12 SING N N 42
GHZ N24 H13 SING N N 43
GHZ C26 H14 SING N N 44
GHZ C27 H15 SING N N 45
GHZ C27 H16 SING N N 46
GHZ O28 H17 SING N N 47
GHZ C29 H18 SING N N 48
GHZ C29 H19 SING N N 49
GHZ C30 H20 SING N N 50
GHZ C31 H21 SING N N 51
GHZ C31 H22 SING N N 52
GHZ C32 H23 SING N N 53
GHZ C2 H24 SING N N 54
GHZ C2 H25 SING N N 55
GHZ C2 H26 SING N N 56
GHZ C3 H27 SING N N 57
GHZ C3 H28 SING N N 58
GHZ C3 H29 SING N N 59
GHZ C32 H30 SING N N 60
GHZ N33 H31 SING N N 61
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GHZ InChI InChI 1.03 "InChI=1S/C21H31N3O5/c1-14(2)13-29-21(28)24-18(10-15-6-4-3-5-7-15)20(27)23-17(12-25)11-16-8-9-22-19(16)26/h3-7,14,16-18,25H,8-13H2,1-2H3,(H,22,26)(H,23,27)(H,24,28)/t16-,17-,18-/m0/s1"
GHZ InChIKey InChI 1.03 OETPXUIOYJZSTO-BZSNNMDCSA-N
GHZ SMILES_CANONICAL CACTVS 3.385 "CC(C)COC(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@H](CO)C[C@@H]2CCNC2=O"
GHZ SMILES CACTVS 3.385 "CC(C)COC(=O)N[CH](Cc1ccccc1)C(=O)N[CH](CO)C[CH]2CCNC2=O"
GHZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)COC(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)CO"
GHZ SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)COC(=O)NC(Cc1ccccc1)C(=O)NC(CC2CCNC2=O)CO"
#
_pdbx_chem_comp_identifier.comp_id GHZ
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "2-methylpropyl ~{N}-[(2~{S})-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-3-phenyl-propan-2-yl]carbamate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GHZ "Create component" 2012-08-15 PDBJ
GHZ "Initial release" 2016-06-01 RCSB
GHZ "Modify descriptor" 2020-08-25 PDBJ
GHZ "Modify formula" 2020-08-25 PDBJ
GHZ "Modify name" 2020-08-25 PDBJ
GHZ "Modify PCM" 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id GHZ
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category "Covalent chemical modification"
_pdbx_chem_comp_pcm.position "Amino-acid side chain"
_pdbx_chem_comp_pcm.polypeptide_position "Any position"
_pdbx_chem_comp_pcm.comp_id_linking_atom C27
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#