data_GIH # _chem_comp.id GIH _chem_comp.name "(2~{S},3~{S})-3-[[5-dimethoxyphosphoryl-4-(5-fluoranyl-1~{H}-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-2-yl]amino]bicyclo[2.2.2]octane-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H25 F N5 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-05-10 _chem_comp.pdbx_modified_date 2023-04-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 489.437 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GIH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7XME _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GIH C10 C1 C 0 1 N N N -31.733 -0.816 13.700 5.274 2.308 0.197 C10 GIH 1 GIH N12 N1 N 0 1 N N N -30.722 -0.258 17.271 2.387 0.697 -0.939 N12 GIH 2 GIH C13 C2 C 0 1 Y N N -30.839 -0.453 18.686 1.223 -0.005 -0.680 C13 GIH 3 GIH C15 C3 C 0 1 Y N N -31.291 -1.832 20.481 -1.082 -0.047 -0.596 C15 GIH 4 GIH C17 C4 C 0 1 Y N N -32.063 -3.632 22.008 -3.415 0.221 -1.556 C17 GIH 5 GIH C21 C5 C 0 1 Y N N -31.839 -6.715 19.031 -4.241 4.063 0.656 C21 GIH 6 GIH C22 C6 C 0 1 Y N N -31.411 -5.710 18.213 -2.963 3.877 1.165 C22 GIH 7 GIH C24 C7 C 0 1 Y N N -31.293 -4.443 18.678 -2.231 2.770 0.769 C24 GIH 8 GIH C26 C8 C 0 1 Y N N -31.086 -0.740 21.319 -1.027 -1.381 -0.174 C26 GIH 9 GIH O01 O1 O 0 1 N N N -27.607 -0.398 14.791 5.376 -1.584 1.690 O01 GIH 10 GIH C02 C9 C 0 1 N N N -28.442 -1.162 15.174 4.300 -1.239 1.261 C02 GIH 11 GIH O03 O2 O 0 1 N N N -28.033 -2.164 15.690 3.262 -2.088 1.291 O03 GIH 12 GIH C04 C10 C 0 1 N N S -29.926 -0.830 15.088 4.126 0.145 0.691 C04 GIH 13 GIH C05 C11 C 0 1 N N N -30.392 -1.445 13.885 5.452 0.903 0.775 C05 GIH 14 GIH C06 C12 C 0 1 N N N -30.706 -2.845 14.091 6.519 0.154 -0.025 C06 GIH 15 GIH C07 C13 C 0 1 N N N -31.809 -3.068 15.067 6.082 0.052 -1.487 C07 GIH 16 GIH C08 C14 C 0 1 N N N -31.919 -1.931 15.979 4.723 0.734 -1.662 C08 GIH 17 GIH C09 C15 C 0 1 N N N -32.600 -0.996 15.044 4.837 2.207 -1.265 C09 GIH 18 GIH C11 C16 C 0 1 N N S -30.608 -1.365 16.307 3.688 0.044 -0.771 C11 GIH 19 GIH N14 N2 N 0 1 Y N N -31.166 -1.613 19.202 0.057 0.601 -0.837 N14 GIH 20 GIH C16 C17 C 0 1 Y N N -31.626 -3.127 20.828 -2.385 0.631 -0.771 C16 GIH 21 GIH N18 N3 N 0 1 Y N N -32.290 -4.878 21.913 -4.445 1.107 -1.463 N18 GIH 22 GIH C19 C18 C 0 1 Y N N -32.045 -5.271 20.741 -4.120 2.132 -0.602 C19 GIH 23 GIH N20 N4 N 0 1 Y N N -32.137 -6.480 20.259 -4.775 3.210 -0.192 N20 GIH 24 GIH F23 F1 F 0 1 N N N -31.133 -5.998 16.969 -2.438 4.768 2.034 F23 GIH 25 GIH C25 C19 C 0 1 Y N N -31.606 -4.227 19.991 -2.820 1.882 -0.130 C25 GIH 26 GIH P27 P1 P 0 1 N N N -31.177 -0.655 23.140 -2.546 -2.311 0.168 P27 GIH 27 GIH O28 O3 O 0 1 N N N -30.362 -1.519 23.771 -3.550 -1.409 0.777 O28 GIH 28 GIH O29 O4 O 0 1 N N N -30.301 0.563 23.463 -3.129 -2.912 -1.207 O29 GIH 29 GIH C30 C20 C 0 1 N N N -30.146 0.985 24.761 -4.374 -3.607 -1.286 C30 GIH 30 GIH O31 O5 O 0 1 N N N -32.592 -0.601 23.768 -2.221 -3.516 1.186 O31 GIH 31 GIH C32 C21 C 0 1 N N N -33.559 0.008 23.066 -3.230 -4.368 1.730 C32 GIH 32 GIH C33 C22 C 0 1 Y N N -30.765 0.469 20.753 0.213 -1.974 -0.029 C33 GIH 33 GIH N34 N5 N 0 1 Y N N -30.658 0.568 19.459 1.304 -1.268 -0.287 N34 GIH 34 GIH H102 H1 H 0 0 N N N -31.609 0.256 13.485 4.514 2.842 0.768 H102 GIH 35 GIH H101 H2 H 0 0 N N N -32.253 -1.301 12.861 6.220 2.848 0.257 H101 GIH 36 GIH H121 H3 H 0 0 N N N -29.906 0.305 17.139 2.342 1.620 -1.231 H121 GIH 37 GIH H171 H4 H 0 0 N N N -32.200 -3.052 22.909 -3.415 -0.670 -2.165 H171 GIH 38 GIH H211 H5 H 0 0 N N N -31.928 -7.719 18.642 -4.810 4.928 0.963 H211 GIH 39 GIH H241 H6 H 0 0 N N N -30.965 -3.637 18.038 -1.234 2.599 1.148 H241 GIH 40 GIH H1 H7 H 0 1 N N N -27.083 -2.154 15.693 3.422 -2.965 1.666 H1 GIH 41 GIH H041 H8 H 0 0 N N N -30.053 0.262 15.041 3.365 0.679 1.262 H041 GIH 42 GIH H051 H9 H 0 0 N N N -29.729 -1.275 13.024 5.764 0.975 1.817 H051 GIH 43 GIH H061 H10 H 0 0 N N N -31.002 -3.281 13.126 7.464 0.693 0.035 H061 GIH 44 GIH H062 H11 H 0 0 N N N -29.804 -3.353 14.462 6.646 -0.848 0.387 H062 GIH 45 GIH H071 H12 H 0 0 N N N -32.757 -3.189 14.522 6.819 0.543 -2.122 H071 GIH 46 GIH H072 H13 H 0 0 N N N -31.601 -3.979 15.647 6.001 -0.998 -1.770 H072 GIH 47 GIH H081 H14 H 0 0 N N N -32.525 -2.152 16.870 4.412 0.661 -2.704 H081 GIH 48 GIH H091 H15 H 0 0 N N N -32.719 -0.018 15.532 3.869 2.692 -1.390 H091 GIH 49 GIH H092 H16 H 0 0 N N N -33.590 -1.399 14.785 5.575 2.698 -1.900 H092 GIH 50 GIH H111 H17 H 0 0 N N N -29.977 -2.153 16.744 3.607 -1.006 -1.054 H111 GIH 51 GIH H181 H18 H 0 0 N N N -32.615 -5.461 22.658 -5.288 1.029 -1.937 H181 GIH 52 GIH H303 H19 H 0 0 N N N -29.487 1.865 24.785 -4.553 -3.917 -2.316 H303 GIH 53 GIH H301 H20 H 0 0 N N N -31.128 1.251 25.180 -4.342 -4.487 -0.643 H301 GIH 54 GIH H302 H21 H 0 0 N N N -29.700 0.176 25.358 -5.180 -2.949 -0.961 H302 GIH 55 GIH H322 H22 H 0 0 N N N -34.502 -0.030 23.631 -3.943 -3.770 2.298 H322 GIH 56 GIH H323 H23 H 0 0 N N N -33.279 1.057 22.890 -3.749 -4.881 0.920 H323 GIH 57 GIH H321 H24 H 0 0 N N N -33.689 -0.504 22.101 -2.767 -5.104 2.389 H321 GIH 58 GIH H331 H25 H 0 0 N N N -30.602 1.334 21.378 0.292 -3.001 0.295 H331 GIH 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GIH C10 C05 SING N N 1 GIH C10 C09 SING N N 2 GIH C05 C06 SING N N 3 GIH C05 C04 SING N N 4 GIH C06 C07 SING N N 5 GIH O01 C02 DOUB N N 6 GIH C09 C08 SING N N 7 GIH C07 C08 SING N N 8 GIH C04 C02 SING N N 9 GIH C04 C11 SING N N 10 GIH C02 O03 SING N N 11 GIH C08 C11 SING N N 12 GIH C11 N12 SING N N 13 GIH F23 C22 SING N N 14 GIH N12 C13 SING N N 15 GIH C22 C24 DOUB Y N 16 GIH C22 C21 SING Y N 17 GIH C24 C25 SING Y N 18 GIH C13 N14 DOUB Y N 19 GIH C13 N34 SING Y N 20 GIH C21 N20 DOUB Y N 21 GIH N14 C15 SING Y N 22 GIH N34 C33 DOUB Y N 23 GIH C25 C19 DOUB Y N 24 GIH C25 C16 SING Y N 25 GIH N20 C19 SING Y N 26 GIH C15 C16 SING N N 27 GIH C15 C26 DOUB Y N 28 GIH C19 N18 SING Y N 29 GIH C33 C26 SING Y N 30 GIH C16 C17 DOUB Y N 31 GIH C26 P27 SING N N 32 GIH N18 C17 SING Y N 33 GIH C32 O31 SING N N 34 GIH P27 O29 SING N N 35 GIH P27 O31 SING N N 36 GIH P27 O28 DOUB N N 37 GIH O29 C30 SING N N 38 GIH C10 H102 SING N N 39 GIH C10 H101 SING N N 40 GIH N12 H121 SING N N 41 GIH C17 H171 SING N N 42 GIH C21 H211 SING N N 43 GIH C24 H241 SING N N 44 GIH O03 H1 SING N N 45 GIH C04 H041 SING N N 46 GIH C05 H051 SING N N 47 GIH C06 H061 SING N N 48 GIH C06 H062 SING N N 49 GIH C07 H071 SING N N 50 GIH C07 H072 SING N N 51 GIH C08 H081 SING N N 52 GIH C09 H091 SING N N 53 GIH C09 H092 SING N N 54 GIH C11 H111 SING N N 55 GIH N18 H181 SING N N 56 GIH C30 H303 SING N N 57 GIH C30 H301 SING N N 58 GIH C30 H302 SING N N 59 GIH C32 H322 SING N N 60 GIH C32 H323 SING N N 61 GIH C32 H321 SING N N 62 GIH C33 H331 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GIH InChI InChI 1.03 "InChI=1S/C22H25FN5O5P/c1-32-34(31,33-2)16-10-26-22(27-18-12-5-3-11(4-6-12)17(18)21(29)30)28-19(16)15-9-25-20-14(15)7-13(23)8-24-20/h7-12,17-18H,3-6H2,1-2H3,(H,24,25)(H,29,30)(H,26,27,28)/t11-,12+,17-,18-/m0/s1" GIH InChIKey InChI 1.03 HZZFRSXJRJLLCP-CMKMFDCUSA-N GIH SMILES_CANONICAL CACTVS 3.385 "CO[P](=O)(OC)c1cnc(N[C@H]2C3CCC(CC3)[C@@H]2C(O)=O)nc1c4c[nH]c5ncc(F)cc45" GIH SMILES CACTVS 3.385 "CO[P](=O)(OC)c1cnc(N[CH]2C3CCC(CC3)[CH]2C(O)=O)nc1c4c[nH]c5ncc(F)cc45" GIH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COP(=O)(c1cnc(nc1c2c[nH]c3c2cc(cn3)F)N[C@@H]4[C@H](C5CCC4CC5)C(=O)O)OC" GIH SMILES "OpenEye OEToolkits" 2.0.7 "COP(=O)(c1cnc(nc1c2c[nH]c3c2cc(cn3)F)NC4C5CCC(C4C(=O)O)CC5)OC" # _pdbx_chem_comp_identifier.comp_id GIH _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S})-3-[[5-dimethoxyphosphoryl-4-(5-fluoranyl-1~{H}-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-2-yl]amino]bicyclo[2.2.2]octane-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GIH "Create component" 2022-05-10 PDBJ GIH "Modify coordinates" 2022-06-14 PDBJ GIH "Initial release" 2023-05-03 RCSB #