data_GIM
#

_chem_comp.id                                   GIM
_chem_comp.name                                 GLUCOIMIDAZOLE
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C8 H13 N2 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(5S,6S,7R,8R)-5-(HYDROXYMETHYL)-1,5,6,7,8,8A-HEXAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL"
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2006-02-10
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       201.200
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GIM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2CEQ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GIM  C1    C1    C  0  1  Y  N  N  118.913  38.780  63.385  -0.064  -1.293   0.153  C1    GIM   1  
GIM  C2    C2    C  0  1  N  N  S  118.579  37.673  62.438  -1.518  -0.917   0.320  C2    GIM   2  
GIM  N10   N10   N  1  1  Y  N  N  119.926  39.662  63.238   0.900  -0.449  -0.122  N10   GIM   3  
GIM  C3    C3    C  0  1  N  N  S  119.574  37.674  61.274  -1.726   0.486  -0.263  C3    GIM   4  
GIM  C4    C4    C  0  1  N  N  R  119.965  39.096  60.896  -0.632   1.414   0.276  C4    GIM   5  
GIM  C5    C5    C  0  1  N  N  R  120.836  39.645  62.051   0.720   0.996  -0.311  C5    GIM   6  
GIM  C6    C6    C  0  1  N  N  N  121.424  41.021  61.734   1.843   1.749   0.404  C6    GIM   7  
GIM  C7    C7    C  0  1  Y  N  N  118.862  40.158  65.082   1.806  -2.420   0.036  C7    GIM   8  
GIM  C8    C8    C  0  1  Y  N  N  119.895  40.535  64.256   2.058  -1.118  -0.197  C8    GIM   9  
GIM  N1    N1    N  0  1  Y  N  N  118.265  39.074  64.530   0.459  -2.530   0.258  N1    GIM  10  
GIM  O3    O3    O  0  1  N  N  N  118.955  37.008  60.168  -3.009   0.982   0.125  O3    GIM  11  
GIM  O2    O2    O  0  1  N  N  N  118.661  36.396  63.081  -2.340  -1.855  -0.378  O2    GIM  12  
GIM  O4    O4    O  0  1  N  N  N  120.682  39.035  59.662  -0.920   2.762  -0.103  O4    GIM  13  
GIM  O6    O6    O  0  1  N  N  N  120.364  41.980  61.618   3.093   1.443  -0.218  O6    GIM  14  
GIM  H2    H2    H  0  1  N  N  N  117.552  37.839  62.082  -1.778  -0.917   1.378  H2    GIM  15  
GIM  H3    H3    H  0  1  N  N  N  120.497  37.151  61.565  -1.665   0.442  -1.351  H3    GIM  16  
GIM  H4    H4    H  0  1  N  N  N  119.100  39.761  60.756  -0.595   1.341   1.362  H4    GIM  17  
GIM  H5    H5    H  0  1  N  N  N  121.722  39.019  62.231   0.743   1.230  -1.375  H5    GIM  18  
GIM  H6C1  1H6C  H  0  0  N  N  N  121.979  40.972  60.786   1.874   1.446   1.451  H6C1  GIM  19  
GIM  H6C2  2H6C  H  0  0  N  N  N  122.105  41.324  62.543   1.658   2.821   0.342  H6C2  GIM  20  
GIM  H7    H7    H  0  1  N  N  N  118.577  40.640  66.006   2.527  -3.224   0.047  H7    GIM  21  
GIM  H8    H8    H  0  1  N  N  N  120.557  41.376  64.400   3.025  -0.688  -0.409  H8    GIM  22  
GIM  H1    H1    H  0  1  N  N  N  117.482  38.579  64.906  -0.027  -3.346   0.454  H1    GIM  23  
GIM  HB    HB    H  0  1  N  N  N  118.818  37.628  59.461  -3.665   0.370  -0.234  HB    GIM  24  
GIM  HA    HA    H  0  1  N  N  N  118.679  35.710  62.424  -2.177  -2.721   0.021  HA    GIM  25  
GIM  HC    HC    H  0  1  N  N  N  120.067  39.021  58.938  -1.777   2.984   0.286  HC    GIM  26  
GIM  H6    H6    H  0  1  N  N  N  120.032  42.192  62.483   3.772   1.937   0.262  H6    GIM  27  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GIM  C1   C2    SING  N  N   1  
GIM  C1   N10   DOUB  Y  N   2  
GIM  C1   N1    SING  Y  N   3  
GIM  C2   C3    SING  N  N   4  
GIM  C2   O2    SING  N  N   5  
GIM  C2   H2    SING  N  N   6  
GIM  N10  C5    SING  N  N   7  
GIM  N10  C8    SING  Y  N   8  
GIM  C3   C4    SING  N  N   9  
GIM  C3   O3    SING  N  N  10  
GIM  C3   H3    SING  N  N  11  
GIM  C4   C5    SING  N  N  12  
GIM  C4   O4    SING  N  N  13  
GIM  C4   H4    SING  N  N  14  
GIM  C5   C6    SING  N  N  15  
GIM  C5   H5    SING  N  N  16  
GIM  C6   O6    SING  N  N  17  
GIM  C6   H6C1  SING  N  N  18  
GIM  C6   H6C2  SING  N  N  19  
GIM  C7   C8    DOUB  Y  N  20  
GIM  C7   N1    SING  Y  N  21  
GIM  C7   H7    SING  N  N  22  
GIM  C8   H8    SING  N  N  23  
GIM  N1   H1    SING  N  N  24  
GIM  O3   HB    SING  N  N  25  
GIM  O2   HA    SING  N  N  26  
GIM  O4   HC    SING  N  N  27  
GIM  O6   H6    SING  N  N  28  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GIM  SMILES            ACDLabs               10.04  "OCC2[n+]1ccnc1C(O)C(O)C2O"  
GIM  SMILES_CANONICAL  CACTVS                3.341  "OC[C@@H]1[C@@H](O)[C@H](O)[C@@H](O)c2[nH]cc[n+]12"  
GIM  SMILES            CACTVS                3.341  "OC[CH]1[CH](O)[CH](O)[CH](O)c2[nH]cc[n+]12"  
GIM  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1c[n+]2c([nH]1)[C@@H]([C@H]([C@@H]([C@H]2CO)O)O)O"  
GIM  SMILES            "OpenEye OEToolkits"  1.5.0  "c1c[n+]2c([nH]1)C(C(C(C2CO)O)O)O"  
GIM  InChI             InChI                 1.03   "InChI=1S/C8H12N2O4/c11-3-4-5(12)6(13)7(14)8-9-1-2-10(4)8/h1-2,4-7,11-14H,3H2/p+1/t4-,5-,6+,7-/m1/s1"  
GIM  InChIKey          InChI                 1.03   RZRDQZQPTISYKY-MVIOUDGNSA-O  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GIM  "SYSTEMATIC NAME"  ACDLabs               10.04  "(5R,6R,7S,8S)-6,7,8-trihydroxy-5-(hydroxymethyl)-5,6,7,8-tetrahydro-1H-imidazo[1,2-a]pyridin-4-ium"  
GIM  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(5R,6R,7S,8S)-5-(hydroxymethyl)-5,6,7,8-tetrahydro-1H-imidazo[2,1-f]pyridin-4-ium-6,7,8-triol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GIM  "Create component"   2006-02-10  EBI   
GIM  "Modify descriptor"  2011-06-04  RCSB  
GIM  "Modify synonyms"    2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     GIM
_pdbx_chem_comp_synonyms.name        "(5S,6S,7R,8R)-5-(HYDROXYMETHYL)-1,5,6,7,8,8A-HEXAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##