data_GJM
# 
_chem_comp.id                                    GJM 
_chem_comp.name                                  "(2S)-oxane-2-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H10 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-07-20 
_chem_comp.pdbx_modified_date                    2024-06-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        130.142 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     GJM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8TD3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
GJM C01 C1  C 0 1 N N N N N N 19.207 167.409 23.206 1.698  -0.082 -0.026 C01 GJM 1  
GJM C02 C2  C 0 1 N N S N N N 20.316 168.441 23.388 0.247  0.053  -0.407 C02 GJM 2  
GJM C03 C3  C 0 1 N N N N N N 19.797 169.497 24.359 -0.373 1.228  0.353  C03 GJM 3  
GJM C04 C4  C 0 1 N N N N N N 20.768 170.680 24.467 -1.862 1.322  0.007  C04 GJM 4  
GJM C05 C5  C 0 1 N N N N N N 21.118 171.183 23.062 -2.539 -0.010 0.344  C05 GJM 5  
GJM C06 C6  C 0 1 N N N N N N 21.587 170.017 22.193 -1.835 -1.137 -0.417 C06 GJM 6  
GJM O01 O1  O 0 1 N N N N N N 18.702 166.866 24.223 2.568  0.891  -0.339 O01 GJM 7  
GJM O02 O2  O 0 1 N N N N N N 18.779 167.126 22.056 2.078  -1.065 0.565  O02 GJM 8  
GJM O03 O3  O 0 1 N N N N N N 20.606 169.018 22.139 -0.449 -1.149 -0.072 O03 GJM 9  
GJM H1  H1  H 0 1 N N N N N N 21.204 167.953 23.817 0.167  0.232  -1.480 H1  GJM 10 
GJM H2  H2  H 0 1 N N N N N N 18.823 169.864 24.002 -0.258 1.069  1.426  H2  GJM 11 
GJM H3  H3  H 0 1 N N N N N N 19.676 169.041 25.353 0.127  2.153  0.065  H3  GJM 12 
GJM H4  H4  H 0 1 N N N N N N 21.686 170.356 24.980 -2.322 2.122  0.588  H4  GJM 13 
GJM H5  H5  H 0 1 N N N N N N 20.295 171.491 25.040 -1.977 1.532  -1.057 H5  GJM 14 
GJM H6  H6  H 0 1 N N N N N N 21.921 171.931 23.132 -2.467 -0.194 1.416  H6  GJM 15 
GJM H7  H7  H 0 1 N N N N N N 20.228 171.642 22.607 -3.588 0.030  0.050  H7  GJM 16 
GJM H8  H8  H 0 1 N N N N N N 22.509 169.596 22.620 -2.285 -2.093 -0.148 H8  GJM 17 
GJM H9  H9  H 0 1 N N N N N N 21.788 170.382 21.175 -1.942 -0.974 -1.489 H9  GJM 18 
GJM H10 H10 H 0 1 N N N N N N 18.012 166.270 23.955 3.489  0.759  -0.074 H10 GJM 19 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
GJM O02 C01 DOUB N N 1  
GJM O03 C06 SING N N 2  
GJM O03 C02 SING N N 3  
GJM C06 C05 SING N N 4  
GJM C05 C04 SING N N 5  
GJM C01 C02 SING N N 6  
GJM C01 O01 SING N N 7  
GJM C02 C03 SING N N 8  
GJM C03 C04 SING N N 9  
GJM C02 H1  SING N N 10 
GJM C03 H2  SING N N 11 
GJM C03 H3  SING N N 12 
GJM C04 H4  SING N N 13 
GJM C04 H5  SING N N 14 
GJM C05 H6  SING N N 15 
GJM C05 H7  SING N N 16 
GJM C06 H8  SING N N 17 
GJM C06 H9  SING N N 18 
GJM O01 H10 SING N N 19 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
GJM SMILES           ACDLabs              12.01 "O=C(O)C1CCCCO1"                                                    
GJM InChI            InChI                1.06  "InChI=1S/C6H10O3/c7-6(8)5-3-1-2-4-9-5/h5H,1-4H2,(H,7,8)/t5-/m0/s1" 
GJM InChIKey         InChI                1.06  MQAYFGXOFCEZRW-YFKPBYRVSA-N                                         
GJM SMILES_CANONICAL CACTVS               3.385 "OC(=O)[C@@H]1CCCCO1"                                               
GJM SMILES           CACTVS               3.385 "OC(=O)[CH]1CCCCO1"                                                 
GJM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1CCO[C@@H](C1)C(=O)O"                                             
GJM SMILES           "OpenEye OEToolkits" 2.0.7 "C1CCOC(C1)C(=O)O"                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
GJM "SYSTEMATIC NAME" ACDLabs              12.01 "(2S)-oxane-2-carboxylic acid"    
GJM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-oxane-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
GJM "Create component" 2023-07-20 RCSB 
GJM "Initial release"  2024-07-03 RCSB 
#