data_GKP # _chem_comp.id GKP _chem_comp.name "(2R,3R)-2,3-bis{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}butanedioic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H18 O12" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-05-24 _chem_comp.pdbx_modified_date 2018-09-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 474.371 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GKP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6DIK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GKP C1 C1 C 0 1 Y N N 2.557 -12.768 4.102 -5.344 1.896 0.391 C1 GKP 1 GKP C10 C2 C 0 1 N N R 4.233 -19.084 3.654 -0.604 -2.395 -0.476 C10 GKP 2 GKP C11 C3 C 0 1 N N N 4.118 -19.771 4.986 -0.131 -2.323 -1.905 C11 GKP 3 GKP C12 C4 C 0 1 N N R 3.684 -19.963 2.539 0.606 -2.400 0.461 C12 GKP 4 GKP C13 C5 C 0 1 N N N 1.758 -21.285 2.060 2.749 -1.390 0.415 C13 GKP 5 GKP C14 C6 C 0 1 N N N 0.300 -21.502 2.036 3.620 -0.300 0.166 C14 GKP 6 GKP C15 C7 C 0 1 N N N -0.225 -22.386 1.196 4.945 -0.429 0.393 C15 GKP 7 GKP C16 C8 C 0 1 Y N N -1.689 -22.597 1.163 5.848 0.702 0.135 C16 GKP 8 GKP C17 C9 C 0 1 Y N N -2.206 -23.679 0.457 7.223 0.568 0.364 C17 GKP 9 GKP C18 C10 C 0 1 Y N N -3.577 -23.883 0.410 8.066 1.634 0.119 C18 GKP 10 GKP C19 C11 C 0 1 Y N N -4.471 -22.934 1.118 7.549 2.839 -0.354 C19 GKP 11 GKP C2 C12 C 0 1 Y N N 2.052 -11.474 4.014 -6.194 2.951 0.642 C2 GKP 12 GKP C20 C13 C 0 1 Y N N -3.912 -21.866 1.809 6.185 2.973 -0.581 C20 GKP 13 GKP C21 C14 C 0 1 Y N N -2.529 -21.701 1.823 5.337 1.913 -0.346 C21 GKP 14 GKP C22 C15 C 0 1 N N N 3.881 -19.241 1.241 0.134 -2.349 1.891 C22 GKP 15 GKP C3 C16 C 0 1 Y N N 2.899 -10.388 4.199 -7.556 2.821 0.403 C3 GKP 16 GKP C4 C17 C 0 1 Y N N 4.331 -10.637 4.487 -8.070 1.624 -0.093 C4 GKP 17 GKP C5 C18 C 0 1 Y N N 4.786 -11.942 4.565 -7.225 0.562 -0.348 C5 GKP 18 GKP C6 C19 C 0 1 Y N N 3.905 -12.999 4.375 -5.852 0.691 -0.107 C6 GKP 19 GKP C7 C20 C 0 1 N N N 4.432 -14.380 4.462 -4.947 -0.434 -0.380 C7 GKP 20 GKP C8 C21 C 0 1 N N N 3.653 -15.421 4.202 -3.622 -0.305 -0.152 C8 GKP 21 GKP C9 C22 C 0 1 N N N 4.206 -16.785 4.285 -2.748 -1.390 -0.416 C9 GKP 22 GKP O1 O1 O 0 1 N N N 5.265 -17.014 4.849 -3.192 -2.437 -0.848 O1 GKP 23 GKP O10 O2 O 0 1 N N N 4.989 -19.427 0.528 0.389 -1.388 2.577 O10 GKP 24 GKP O11 O3 O 0 1 N N N 5.185 -9.598 4.674 -9.405 1.502 -0.326 O11 GKP 25 GKP O12 O4 O 0 1 N N N 2.434 -9.110 4.120 -8.389 3.864 0.653 O12 GKP 26 GKP O2 O5 O 0 1 N N N 3.478 -17.875 3.669 -1.425 -1.262 -0.187 O2 GKP 27 GKP O3 O6 O 0 1 N N N 3.037 -19.916 5.536 -0.388 -1.352 -2.578 O3 GKP 28 GKP O4 O7 O 0 1 N N N 5.213 -20.227 5.589 0.574 -3.336 -2.431 O4 GKP 29 GKP O5 O8 O 0 1 N N N 2.286 -20.119 2.744 1.425 -1.261 0.189 O5 GKP 30 GKP O6 O9 O 0 1 N N N 2.524 -22.062 1.509 3.195 -2.442 0.833 O6 GKP 31 GKP O7 O10 O 0 1 N N N -5.820 -23.109 1.089 8.380 3.886 -0.594 O7 GKP 32 GKP O8 O11 O 0 1 N N N -4.094 -24.942 -0.273 9.402 1.508 0.341 O8 GKP 33 GKP O9 O12 O 0 1 N N N 3.028 -18.472 0.828 -0.570 -3.371 2.403 O9 GKP 34 GKP H1 H1 H 0 1 N N N 1.894 -13.608 3.956 -4.285 2.001 0.574 H1 GKP 35 GKP H2 H2 H 0 1 N N N 5.292 -18.869 3.449 -1.180 -3.308 -0.330 H2 GKP 36 GKP H3 H3 H 0 1 N N N 4.205 -20.932 2.526 1.185 -3.310 0.302 H3 GKP 37 GKP H4 H4 H 0 1 N N N -0.341 -20.942 2.701 3.224 0.634 -0.205 H4 GKP 38 GKP H5 H5 H 0 1 N N N 0.417 -22.951 0.537 5.341 -1.362 0.764 H5 GKP 39 GKP H6 H6 H 0 1 N N N -1.540 -24.359 -0.054 7.623 -0.365 0.732 H6 GKP 40 GKP H7 H7 H 0 1 N N N 1.005 -11.314 3.803 -5.801 3.880 1.026 H7 GKP 41 GKP H8 H8 H 0 1 N N N -4.547 -21.167 2.333 5.789 3.908 -0.948 H8 GKP 42 GKP H9 H9 H 0 1 N N N -2.100 -20.864 2.354 4.278 2.018 -0.528 H9 GKP 43 GKP H10 H10 H 0 1 N N N 5.827 -12.139 4.774 -7.623 -0.366 -0.732 H10 GKP 44 GKP H11 H11 H 0 1 N N N 5.463 -14.541 4.740 -5.341 -1.363 -0.764 H11 GKP 45 GKP H12 H12 H 0 1 N N N 2.619 -15.270 3.931 -3.228 0.624 0.232 H12 GKP 46 GKP H13 H13 H 0 1 N N N 6.057 -9.932 4.847 -9.674 1.758 -1.218 H13 GKP 47 GKP H14 H14 H 0 1 N N N 3.148 -8.503 4.272 -8.513 4.458 -0.101 H14 GKP 48 GKP H15 H15 H 0 1 N N N 4.976 -20.627 6.418 0.855 -3.244 -3.352 H15 GKP 49 GKP H16 H16 H 0 1 N N N -6.240 -22.419 1.589 8.733 3.910 -1.494 H16 GKP 50 GKP H17 H17 H 0 1 N N N -5.041 -24.932 -0.203 9.900 1.193 -0.426 H17 GKP 51 GKP H18 H18 H 0 1 N N N 3.310 -18.100 0.001 -0.851 -3.293 3.325 H18 GKP 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GKP O8 C18 SING N N 1 GKP C18 C17 DOUB Y N 2 GKP C18 C19 SING Y N 3 GKP C17 C16 SING Y N 4 GKP O10 C22 DOUB N N 5 GKP O9 C22 SING N N 6 GKP O7 C19 SING N N 7 GKP C19 C20 DOUB Y N 8 GKP C16 C15 SING N N 9 GKP C16 C21 DOUB Y N 10 GKP C15 C14 DOUB N E 11 GKP C22 C12 SING N N 12 GKP O6 C13 DOUB N N 13 GKP C20 C21 SING Y N 14 GKP C14 C13 SING N N 15 GKP C13 O5 SING N N 16 GKP C12 O5 SING N N 17 GKP C12 C10 SING N N 18 GKP C10 O2 SING N N 19 GKP C10 C11 SING N N 20 GKP O2 C9 SING N N 21 GKP C2 C1 DOUB Y N 22 GKP C2 C3 SING Y N 23 GKP C1 C6 SING Y N 24 GKP O12 C3 SING N N 25 GKP C3 C4 DOUB Y N 26 GKP C8 C9 SING N N 27 GKP C8 C7 DOUB N E 28 GKP C9 O1 DOUB N N 29 GKP C6 C7 SING N N 30 GKP C6 C5 DOUB Y N 31 GKP C4 C5 SING Y N 32 GKP C4 O11 SING N N 33 GKP C11 O3 DOUB N N 34 GKP C11 O4 SING N N 35 GKP C1 H1 SING N N 36 GKP C10 H2 SING N N 37 GKP C12 H3 SING N N 38 GKP C14 H4 SING N N 39 GKP C15 H5 SING N N 40 GKP C17 H6 SING N N 41 GKP C2 H7 SING N N 42 GKP C20 H8 SING N N 43 GKP C21 H9 SING N N 44 GKP C5 H10 SING N N 45 GKP C7 H11 SING N N 46 GKP C8 H12 SING N N 47 GKP O11 H13 SING N N 48 GKP O12 H14 SING N N 49 GKP O4 H15 SING N N 50 GKP O7 H16 SING N N 51 GKP O8 H17 SING N N 52 GKP O9 H18 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GKP SMILES ACDLabs 12.01 "c1c(cc(c(c1)O)O)[C@H]=CC(=O)OC(C(=O)O)C(OC([C@H]=[C@H]c2ccc(c(c2)O)O)=O)C(=O)O" GKP InChI InChI 1.03 "InChI=1S/C22H18O12/c23-13-5-1-11(9-15(13)25)3-7-17(27)33-19(21(29)30)20(22(31)32)34-18(28)8-4-12-2-6-14(24)16(26)10-12/h1-10,19-20,23-26H,(H,29,30)(H,31,32)/b7-3+,8-4+/t19-,20-/m1/s1" GKP InChIKey InChI 1.03 YDDGKXBLOXEEMN-IABMMNSOSA-N GKP SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@H](OC(=O)\C=C\c1ccc(O)c(O)c1)[C@@H](OC(=O)/C=C/c2ccc(O)c(O)c2)C(O)=O" GKP SMILES CACTVS 3.385 "OC(=O)[CH](OC(=O)C=Cc1ccc(O)c(O)c1)[CH](OC(=O)C=Cc2ccc(O)c(O)c2)C(O)=O" GKP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1c(cc(c(c1)O)O)/C=C/C(=O)O[C@@H](C(=O)O)[C@@H](OC(=O)/C=C/c2cc(c(cc2)O)O)C(=O)O" GKP SMILES "OpenEye OEToolkits" 2.0.6 "c1cc(c(cc1C=CC(=O)OC(C(C(=O)O)OC(=O)C=Cc2ccc(c(c2)O)O)C(=O)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GKP "SYSTEMATIC NAME" ACDLabs 12.01 "(2R,3R)-2,3-bis{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}butanedioic acid" GKP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R},3~{R})-2,3-bis[[(~{E})-3-[3,4-bis(oxidanyl)phenyl]prop-2-enoyl]oxy]butanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GKP "Create component" 2018-05-24 RCSB GKP "Initial release" 2018-10-03 RCSB #