data_GLK # _chem_comp.id GLK _chem_comp.name "(4S)-4-amino-5,5-dihydroxypentanoic acid" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H11 N O4" _chem_comp.mon_nstd_parent_comp_id GLU _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-09-24 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 149.145 _chem_comp.one_letter_code E _chem_comp.three_letter_code GLK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GLK N N N 0 1 N N N Y Y N 88.261 -7.660 -9.990 1.172 1.825 -0.385 N GLK 1 GLK CA CA C 0 1 N N S Y N N 87.744 -7.276 -11.334 1.118 0.488 0.221 CA GLK 2 GLK C C C 0 1 N N N Y N Y 88.474 -6.030 -11.811 2.308 -0.342 -0.266 C GLK 3 GLK CB CB C 0 1 N N N N N N 86.234 -7.012 -11.267 -0.185 -0.203 -0.184 CB GLK 4 GLK CG CG C 0 1 N N N N N N 85.437 -8.194 -10.746 -1.372 0.558 0.410 CG GLK 5 GLK CD CD C 0 1 N N N N N N 83.937 -7.944 -10.707 -2.656 -0.122 0.011 CD GLK 6 GLK OE1 OE1 O 0 1 N N N N N N 83.425 -7.140 -11.520 -2.625 -1.115 -0.677 OE1 GLK 7 GLK OE2 OE2 O 0 1 N N N N N N 83.260 -8.567 -9.862 -3.834 0.374 0.420 OE2 GLK 8 GLK O O O 0 1 N Y N Y N Y 88.543 -5.801 -13.033 3.526 0.304 0.112 O GLK 9 GLK H H H 0 1 N N N Y Y N 87.785 -8.479 -9.671 1.136 1.767 -1.392 H GLK 10 GLK H2 H2 H 0 1 N Y N Y Y N 89.241 -7.847 -10.051 0.434 2.413 -0.030 H2 GLK 11 GLK HA HA H 0 1 N N N Y N N 87.920 -8.099 -12.043 1.159 0.579 1.306 HA GLK 12 GLK HB2 HB2 H 0 1 N N N N N N 86.064 -6.160 -10.592 -0.268 -0.215 -1.271 HB2 GLK 13 GLK HB3 HB3 H 0 1 N N N N N N 85.881 -6.781 -12.283 -0.186 -1.227 0.192 HB3 GLK 14 GLK HG2 HG2 H 0 1 N N N N N N 85.624 -9.052 -11.408 -1.289 0.570 1.496 HG2 GLK 15 GLK HG3 HG3 H 0 1 N N N N N N 85.775 -8.411 -9.722 -1.372 1.582 0.034 HG3 GLK 16 GLK HE2 HE2 H 0 1 N N N N N N 82.345 -8.328 -9.951 -4.630 -0.097 0.139 HE2 GLK 17 GLK H1 H1 H 0 1 N Y N Y N Y 89.025 -4.995 -13.178 4.323 -0.168 -0.165 H1 GLK 18 GLK OXT OXT O 0 1 N Y N Y N Y 89.837 -6.189 -11.409 2.255 -1.642 0.324 OXT GLK 19 GLK H10 H10 H 0 1 N N N Y N Y 87.888 -5.203 -11.383 2.267 -0.433 -1.352 H10 GLK 20 GLK HXT HXT H 0 1 N Y N Y N Y 90.340 -5.432 -11.685 2.287 -1.638 1.290 HXT GLK 21 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GLK N CA SING N N 1 GLK N H SING N N 2 GLK N H2 SING N N 3 GLK CA C SING N N 4 GLK CA CB SING N N 5 GLK CA HA SING N N 6 GLK C O SING N N 7 GLK CB CG SING N N 8 GLK CB HB2 SING N N 9 GLK CB HB3 SING N N 10 GLK CG CD SING N N 11 GLK CG HG2 SING N N 12 GLK CG HG3 SING N N 13 GLK CD OE1 DOUB N N 14 GLK CD OE2 SING N N 15 GLK OE2 HE2 SING N N 16 GLK O H1 SING N N 17 GLK C OXT SING N N 18 GLK C H10 SING N N 19 GLK OXT HXT SING N N 20 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GLK SMILES ACDLabs 12.01 "O=C(O)CCC(N)C(O)O" GLK SMILES_CANONICAL CACTVS 3.370 "N[C@@H](CCC(O)=O)C(O)O" GLK SMILES CACTVS 3.370 "N[CH](CCC(O)=O)C(O)O" GLK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C(CC(=O)O)[C@@H](C(O)O)N" GLK SMILES "OpenEye OEToolkits" 1.7.0 "C(CC(=O)O)C(C(O)O)N" GLK InChI InChI 1.03 "InChI=1S/C5H11NO4/c6-3(5(9)10)1-2-4(7)8/h3,5,9-10H,1-2,6H2,(H,7,8)/t3-/m0/s1" GLK InChIKey InChI 1.03 MKADZLMZCPSMML-VKHMYHEASA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GLK "SYSTEMATIC NAME" ACDLabs 12.01 "(4S)-4-amino-5,5-dihydroxypentanoic acid" GLK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(4S)-4-azanyl-5,5-dihydroxy-pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GLK "Create component" 2010-09-24 RCSB GLK "Modify parent residue" 2011-01-27 RCSB GLK "Modify descriptor" 2011-06-04 RCSB GLK "Modify backbone" 2023-11-03 PDBE #