data_GMP # _chem_comp.id GMP _chem_comp.name GUANOSINE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 N5 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2012-01-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 283.241 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GMP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GMP "O5'" O5* O 0 1 N N N 31.404 62.454 13.365 4.797 1.917 0.937 "O5'" GMP 1 GMP "C5'" C5* C 0 1 N N N 31.124 61.089 13.697 4.460 0.983 -0.092 "C5'" GMP 2 GMP "C4'" C4* C 0 1 N N R 32.124 60.123 13.050 3.386 0.023 0.423 "C4'" GMP 3 GMP "O4'" O4* O 0 1 N N N 32.041 60.240 11.620 2.161 0.738 0.655 "O4'" GMP 4 GMP "C3'" C3* C 0 1 N N S 33.573 60.490 13.373 3.093 -1.054 -0.640 "C3'" GMP 5 GMP "O3'" O3* O 0 1 N N N 33.959 59.916 14.627 3.371 -2.356 -0.123 "O3'" GMP 6 GMP "C2'" C2* C 0 1 N N R 34.289 59.751 12.245 1.581 -0.897 -0.932 "C2'" GMP 7 GMP "O2'" O2* O 0 1 N N N 34.283 58.339 12.480 0.952 -2.174 -1.065 "O2'" GMP 8 GMP "C1'" C1* C 0 1 N N R 33.358 60.054 11.068 1.079 -0.164 0.338 "C1'" GMP 9 GMP N9 N9 N 0 1 Y N N 33.721 61.309 10.368 -0.148 0.583 0.051 N9 GMP 10 GMP C8 C8 C 0 1 Y N N 33.378 62.554 10.698 -0.224 1.879 -0.370 C8 GMP 11 GMP N7 N7 N 0 1 Y N N 33.861 63.399 9.790 -1.470 2.219 -0.526 N7 GMP 12 GMP C5 C5 C 0 1 Y N N 34.517 62.694 8.871 -2.265 1.166 -0.216 C5 GMP 13 GMP C6 C6 C 0 1 N N N 35.193 63.009 7.697 -3.664 0.958 -0.202 C6 GMP 14 GMP O6 O6 O 0 1 N N N 35.347 64.175 7.328 -4.432 1.851 -0.519 O6 GMP 15 GMP N1 N1 N 0 1 N N N 35.736 61.972 6.934 -4.129 -0.254 0.171 N1 GMP 16 GMP C2 C2 C 0 1 N N N 35.603 60.642 7.358 -3.262 -1.245 0.524 C2 GMP 17 GMP N2 N2 N 0 1 N N N 36.122 59.657 6.633 -3.763 -2.467 0.899 N2 GMP 18 GMP N3 N3 N 0 1 N N N 34.952 60.376 8.497 -1.961 -1.065 0.515 N3 GMP 19 GMP C4 C4 C 0 1 Y N N 34.420 61.358 9.241 -1.427 0.107 0.151 C4 GMP 20 GMP "HO5'" *HO5 H 0 0 N N N 31.466 62.968 14.162 5.473 2.558 0.680 "HO5'" GMP 21 GMP "H5'1" 1H5* H 0 0 N N N 31.181 60.974 14.790 4.081 1.521 -0.961 "H5'1" GMP 22 GMP "H5'2" 2H5* H 0 0 N N N 30.121 60.845 13.318 5.348 0.418 -0.374 "H5'2" GMP 23 GMP "H4'" H4* H 0 1 N N N 31.874 59.122 13.431 3.721 -0.447 1.347 "H4'" GMP 24 GMP "H3'" H3* H 0 1 N N N 33.774 61.569 13.444 3.678 -0.870 -1.541 "H3'" GMP 25 GMP "HO3'" *HO3 H 0 0 N N N 34.044 58.975 14.532 4.294 -2.490 0.132 "HO3'" GMP 26 GMP "H2'" H2* H 0 1 N N N 35.340 60.047 12.115 1.417 -0.291 -1.823 "H2'" GMP 27 GMP "HO2'" *HO2 H 0 0 N N N 34.282 57.879 11.649 1.298 -2.708 -1.793 "HO2'" GMP 28 GMP "H1'" H1* H 0 1 N N N 33.423 59.227 10.345 0.918 -0.871 1.151 "H1'" GMP 29 GMP H8 H8 H 0 1 N N N 32.799 62.833 11.566 0.623 2.526 -0.547 H8 GMP 30 GMP HN1 HN1 H 0 1 N N N 36.220 62.179 6.084 -5.085 -0.420 0.189 HN1 GMP 31 GMP HN21 1HN2 H 0 0 N N N 36.252 59.968 5.692 -4.722 -2.615 0.910 HN21 GMP 32 GMP HN22 2HN2 H 0 0 N N N 37.004 59.387 7.020 -3.159 -3.182 1.152 HN22 GMP 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GMP "O5'" "C5'" SING N N 1 GMP "O5'" "HO5'" SING N N 2 GMP "C5'" "C4'" SING N N 3 GMP "C5'" "H5'1" SING N N 4 GMP "C5'" "H5'2" SING N N 5 GMP "C4'" "O4'" SING N N 6 GMP "C4'" "C3'" SING N N 7 GMP "C4'" "H4'" SING N N 8 GMP "O4'" "C1'" SING N N 9 GMP "C3'" "O3'" SING N N 10 GMP "C3'" "C2'" SING N N 11 GMP "C3'" "H3'" SING N N 12 GMP "O3'" "HO3'" SING N N 13 GMP "C2'" "O2'" SING N N 14 GMP "C2'" "C1'" SING N N 15 GMP "C2'" "H2'" SING N N 16 GMP "O2'" "HO2'" SING N N 17 GMP "C1'" N9 SING N N 18 GMP "C1'" "H1'" SING N N 19 GMP N9 C8 SING Y N 20 GMP N9 C4 SING Y N 21 GMP C8 N7 DOUB Y N 22 GMP C8 H8 SING N N 23 GMP N7 C5 SING Y N 24 GMP C5 C6 SING N N 25 GMP C5 C4 DOUB Y N 26 GMP C6 O6 DOUB N N 27 GMP C6 N1 SING N N 28 GMP N1 C2 SING N N 29 GMP N1 HN1 SING N N 30 GMP C2 N2 SING N N 31 GMP C2 N3 DOUB N N 32 GMP N2 HN21 SING N N 33 GMP N2 HN22 SING N N 34 GMP N3 C4 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GMP SMILES ACDLabs 10.04 "O=C1c2ncn(c2N=C(N)N1)C3OC(C(O)C3O)CO" GMP InChI InChI 1.03 "InChI=1S/C10H13N5O5/c11-10-13-7-4(8(19)14-10)12-2-15(7)9-6(18)5(17)3(1-16)20-9/h2-3,5-6,9,16-18H,1H2,(H3,11,13,14,19)/t3-,5-,6-,9-/m1/s1" GMP InChIKey InChI 1.03 NYHBQMYGNKIUIF-UUOKFMHZSA-N GMP SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O" GMP SMILES CACTVS 3.385 "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO)[CH](O)[CH]3O" GMP SMILES_CANONICAL "OpenEye OEToolkits" 1.7.5 "c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)N=C(NC2=O)N" GMP SMILES "OpenEye OEToolkits" 1.7.5 "c1nc2c(n1C3C(C(C(O3)CO)O)O)N=C(NC2=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GMP "SYSTEMATIC NAME" ACDLabs 10.04 guanosine GMP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-amino-9-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-1H-purin-6-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GMP "Create component" 1999-07-08 RCSB GMP "Modify descriptor" 2011-06-04 RCSB GMP "Modify descriptor" 2012-01-05 RCSB GMP "Modify coordinates" 2012-01-05 RCSB #