data_GNU # _chem_comp.id GNU _chem_comp.name "(2S,3S)-2,3-bis[(3-methoxy-4-oxidanyl-phenyl)methyl]butane-1,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H26 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(+)-secoisolariciresinol" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-04 _chem_comp.pdbx_modified_date 2021-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 362.417 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GNU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7CS7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GNU C10 C1 C 0 1 N N N 341.287 125.036 18.727 1.223 0.513 0.182 C10 GNU 1 GNU C13 C2 C 0 1 Y N N 338.333 121.259 20.150 -2.948 -0.199 0.727 C13 GNU 2 GNU C15 C3 C 0 1 Y N N 339.192 120.566 20.973 -3.459 0.958 0.169 C15 GNU 3 GNU C17 C4 C 0 1 Y N N 336.967 121.264 20.429 -3.792 -1.248 1.044 C17 GNU 4 GNU C20 C5 C 0 1 Y N N 343.017 127.301 16.205 4.982 0.558 -0.200 C20 GNU 5 GNU C21 C6 C 0 1 Y N N 336.488 120.579 21.539 -5.149 -1.143 0.806 C21 GNU 6 GNU C22 C7 C 0 1 Y N N 344.536 125.514 16.741 4.451 0.379 2.137 C22 GNU 7 GNU C24 C8 C 0 1 Y N N 344.251 126.677 16.035 5.394 0.459 1.125 C24 GNU 8 GNU C26 C9 C 0 1 N N N 341.618 129.288 15.680 5.407 0.725 -2.534 C26 GNU 9 GNU O01 O1 O 0 1 N N N 337.320 124.097 18.634 -2.669 -2.325 -0.786 O01 GNU 10 GNU O02 O2 O 0 1 N N N 338.824 123.379 16.397 2.820 -1.623 -1.031 O02 GNU 11 GNU O03 O3 O 0 1 N N N 339.578 119.146 22.926 -5.322 2.207 -0.621 O03 GNU 12 GNU O04 O4 O 0 1 N N N 342.765 128.482 15.482 5.904 0.632 -1.197 O04 GNU 13 GNU O05 O5 O 0 1 N N N 336.911 119.199 23.471 -7.003 0.118 0.012 O05 GNU 14 GNU O06 O6 O 0 1 N N N 345.214 127.204 15.166 6.720 0.441 1.427 O06 GNU 15 GNU C07 C10 C 0 1 N N S 339.508 123.353 19.290 -0.783 -0.911 -0.251 C07 GNU 16 GNU C08 C11 C 0 1 N N S 340.428 123.892 18.153 0.732 -0.919 -0.039 C08 GNU 17 GNU C09 C12 C 0 1 N N N 338.938 121.979 18.932 -1.468 -0.321 0.983 C09 GNU 18 GNU C11 C13 C 0 1 N N N 338.329 124.275 19.610 -1.275 -2.343 -0.472 C11 GNU 19 GNU C12 C14 C 0 1 N N N 339.636 124.399 16.936 1.417 -1.508 -1.274 C12 GNU 20 GNU C14 C15 C 0 1 Y N N 342.359 125.581 17.765 2.694 0.494 0.512 C14 GNU 21 GNU C16 C16 C 0 1 Y N N 342.085 126.745 17.080 3.630 0.575 -0.502 C16 GNU 22 GNU C18 C17 C 0 1 Y N N 343.595 124.967 17.605 3.103 0.396 1.829 C18 GNU 23 GNU C19 C18 C 0 1 Y N N 338.726 119.872 22.074 -4.818 1.069 -0.072 C19 GNU 24 GNU C23 C19 C 0 1 Y N N 337.372 119.887 22.356 -5.668 0.014 0.247 C23 GNU 25 GNU C25 C20 C 0 1 N N N 340.953 119.035 22.675 -4.392 3.249 -0.924 C25 GNU 26 GNU H101 H1 H 0 0 N N N 341.794 124.664 19.630 1.062 1.097 -0.725 H101 GNU 27 GNU H102 H2 H 0 0 N N N 340.617 125.865 18.998 0.671 0.964 1.007 H102 GNU 28 GNU H151 H3 H 0 0 N N N 340.250 120.565 20.754 -2.798 1.776 -0.078 H151 GNU 29 GNU H171 H4 H 0 0 N N N 336.284 121.798 19.785 -3.389 -2.150 1.480 H171 GNU 30 GNU H211 H5 H 0 0 N N N 335.432 120.585 21.765 -5.806 -1.964 1.055 H211 GNU 31 GNU H221 H6 H 0 0 N N N 345.495 125.032 16.617 4.768 0.302 3.166 H221 GNU 32 GNU H263 H7 H 0 0 N N N 341.653 130.150 14.997 4.802 -0.153 -2.759 H263 GNU 33 GNU H262 H8 H 0 0 N N N 340.714 128.695 15.476 4.797 1.623 -2.633 H262 GNU 34 GNU H261 H9 H 0 0 N N N 341.596 129.645 16.720 6.245 0.778 -3.230 H261 GNU 35 GNU H011 H10 H 0 0 N N N 336.586 124.668 18.829 -3.049 -3.201 -0.939 H011 GNU 36 GNU H021 H11 H 0 0 N N N 338.346 123.716 15.648 3.319 -1.991 -1.773 H021 GNU 37 GNU H051 H12 H 0 0 N N N 337.643 118.785 23.913 -7.505 0.487 0.752 H051 GNU 38 GNU H061 H13 H 0 0 N N N 345.987 126.652 15.177 7.100 1.317 1.581 H061 GNU 39 GNU H071 H14 H 0 0 N N N 340.119 123.247 20.198 -1.025 -0.305 -1.125 H071 GNU 40 GNU H081 H15 H 0 0 N N N 341.094 123.079 17.828 0.973 -1.524 0.834 H081 GNU 41 GNU H092 H16 H 0 0 N N N 338.153 122.109 18.173 -1.054 0.665 1.193 H092 GNU 42 GNU H091 H17 H 0 0 N N N 339.747 121.358 18.520 -1.300 -0.975 1.839 H091 GNU 43 GNU H111 H18 H 0 0 N N N 338.668 125.321 19.602 -1.114 -2.926 0.434 H111 GNU 44 GNU H112 H19 H 0 0 N N N 337.927 124.027 20.604 -0.723 -2.793 -1.297 H112 GNU 45 GNU H121 H20 H 0 0 N N N 340.342 124.741 16.165 1.249 -0.854 -2.130 H121 GNU 46 GNU H122 H21 H 0 0 N N N 338.998 125.239 17.247 1.002 -2.494 -1.483 H122 GNU 47 GNU H161 H22 H 0 0 N N N 341.133 127.234 17.223 3.307 0.652 -1.530 H161 GNU 48 GNU H181 H23 H 0 0 N N N 343.824 124.065 18.152 2.369 0.333 2.618 H181 GNU 49 GNU H252 H24 H 0 0 N N N 341.422 118.427 23.463 -4.923 4.097 -1.355 H252 GNU 50 GNU H251 H25 H 0 0 N N N 341.110 118.553 21.698 -3.888 3.562 -0.010 H251 GNU 51 GNU H253 H26 H 0 0 N N N 341.406 120.037 22.666 -3.654 2.881 -1.637 H253 GNU 52 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GNU O06 C24 SING N N 1 GNU O04 C26 SING N N 2 GNU O04 C20 SING N N 3 GNU C24 C20 DOUB Y N 4 GNU C24 C22 SING Y N 5 GNU C20 C16 SING Y N 6 GNU O02 C12 SING N N 7 GNU C22 C18 DOUB Y N 8 GNU C12 C08 SING N N 9 GNU C16 C14 DOUB Y N 10 GNU C18 C14 SING Y N 11 GNU C14 C10 SING N N 12 GNU C08 C10 SING N N 13 GNU C08 C07 SING N N 14 GNU O01 C11 SING N N 15 GNU C09 C07 SING N N 16 GNU C09 C13 SING N N 17 GNU C07 C11 SING N N 18 GNU C13 C17 DOUB Y N 19 GNU C13 C15 SING Y N 20 GNU C17 C21 SING Y N 21 GNU C15 C19 DOUB Y N 22 GNU C21 C23 DOUB Y N 23 GNU C19 C23 SING Y N 24 GNU C19 O03 SING N N 25 GNU C23 O05 SING N N 26 GNU C25 O03 SING N N 27 GNU C10 H101 SING N N 28 GNU C10 H102 SING N N 29 GNU C15 H151 SING N N 30 GNU C17 H171 SING N N 31 GNU C21 H211 SING N N 32 GNU C22 H221 SING N N 33 GNU C26 H263 SING N N 34 GNU C26 H262 SING N N 35 GNU C26 H261 SING N N 36 GNU O01 H011 SING N N 37 GNU O02 H021 SING N N 38 GNU O05 H051 SING N N 39 GNU O06 H061 SING N N 40 GNU C07 H071 SING N N 41 GNU C08 H081 SING N N 42 GNU C09 H092 SING N N 43 GNU C09 H091 SING N N 44 GNU C11 H111 SING N N 45 GNU C11 H112 SING N N 46 GNU C12 H121 SING N N 47 GNU C12 H122 SING N N 48 GNU C16 H161 SING N N 49 GNU C18 H181 SING N N 50 GNU C25 H252 SING N N 51 GNU C25 H251 SING N N 52 GNU C25 H253 SING N N 53 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GNU InChI InChI 1.03 "InChI=1S/C20H26O6/c1-25-19-9-13(3-5-17(19)23)7-15(11-21)16(12-22)8-14-4-6-18(24)20(10-14)26-2/h3-6,9-10,15-16,21-24H,7-8,11-12H2,1-2H3/t15-,16-/m1/s1" GNU InChIKey InChI 1.03 PUETUDUXMCLALY-HZPDHXFCSA-N GNU SMILES_CANONICAL CACTVS 3.385 "COc1cc(C[C@H](CO)[C@@H](CO)Cc2ccc(O)c(OC)c2)ccc1O" GNU SMILES CACTVS 3.385 "COc1cc(C[CH](CO)[CH](CO)Cc2ccc(O)c(OC)c2)ccc1O" GNU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc(ccc1O)C[C@H](CO)[C@H](Cc2ccc(c(c2)OC)O)CO" GNU SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc(ccc1O)CC(CO)C(Cc2ccc(c(c2)OC)O)CO" # _pdbx_chem_comp_identifier.comp_id GNU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S})-2,3-bis[(3-methoxy-4-oxidanyl-phenyl)methyl]butane-1,4-diol" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id GNU _pdbx_chem_comp_synonyms.name "(+)-secoisolariciresinol" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GNU "Create component" 2020-09-04 PDBJ GNU "Modify synonyms" 2021-03-01 PDBE GNU "Initial release" 2021-06-09 RCSB ##