data_GO6 # _chem_comp.id GO6 _chem_comp.name "(2R,3R)-2,3-bis[(3-methoxy-4-oxidanyl-phenyl)methyl]butane-1,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H26 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(-)-secoisolariciresinol" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-04 _chem_comp.pdbx_modified_date 2021-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 362.417 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GO6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7CS8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GO6 C10 C1 C 0 1 N N N -97.878 124.749 -21.432 1.295 -0.053 -0.612 C10 GO6 1 GO6 C13 C2 C 0 1 Y N N -95.270 122.108 -23.665 -2.932 0.675 -0.373 C13 GO6 2 GO6 C15 C3 C 0 1 Y N N -95.903 121.150 -24.428 -3.554 -0.525 -0.664 C15 GO6 3 GO6 C17 C4 C 0 1 Y N N -93.897 122.105 -23.541 -3.673 1.750 0.079 C17 GO6 4 GO6 C20 C5 C 0 1 Y N N -100.627 126.821 -19.838 4.983 -0.708 -0.119 C20 GO6 5 GO6 C21 C6 C 0 1 Y N N -93.169 121.133 -24.212 -5.042 1.633 0.237 C21 GO6 6 GO6 C22 C7 C 0 1 Y N N -98.949 128.315 -20.624 4.728 1.309 -1.401 C22 GO6 7 GO6 C24 C8 C 0 1 Y N N -100.164 128.099 -20.005 5.547 0.374 -0.789 C24 GO6 8 GO6 C26 C9 C 0 1 N N N -101.896 125.700 -18.188 5.135 -2.713 1.152 C26 GO6 9 GO6 O01 O1 O 0 1 N N N -94.037 126.064 -22.516 -0.386 -1.418 2.291 O01 GO6 10 GO6 O02 O2 O 0 1 N N N -94.921 123.785 -19.363 0.571 2.842 1.669 O02 GO6 11 GO6 O03 O3 O 0 1 N N N -95.788 119.203 -25.883 -5.539 -1.829 -0.792 O03 GO6 12 GO6 O04 O4 O 0 1 N N N -101.860 126.642 -19.220 5.783 -1.629 0.483 O04 GO6 13 GO6 O05 O5 O 0 1 N N N -93.105 119.192 -25.679 -7.020 0.321 0.087 O05 GO6 14 GO6 O06 O6 O 0 1 N N N -100.929 129.166 -19.552 6.898 0.513 -0.843 O06 GO6 15 GO6 C07 C10 C 0 1 N N R -95.470 124.161 -22.134 -0.740 0.416 0.758 C07 GO6 16 GO6 C08 C11 C 0 1 N N R -96.390 124.775 -21.049 0.763 0.670 0.626 C08 GO6 17 GO6 C09 C12 C 0 1 N N N -96.184 123.105 -22.962 -1.440 0.808 -0.544 C09 GO6 18 GO6 C11 C13 C 0 1 N N N -95.025 125.254 -23.098 -0.984 -1.068 1.042 C11 GO6 19 GO6 C12 C14 C 0 1 N N N -96.254 124.061 -19.689 1.016 2.173 0.488 C12 GO6 20 GO6 C14 C15 C 0 1 Y N N -98.670 125.948 -20.914 2.794 0.095 -0.675 C14 GO6 21 GO6 C16 C16 C 0 1 Y N N -99.893 125.745 -20.295 3.605 -0.842 -0.062 C16 GO6 22 GO6 C18 C17 C 0 1 Y N N -98.199 127.237 -21.088 3.353 1.166 -1.344 C18 GO6 23 GO6 C19 C18 C 0 1 Y N N -95.186 120.197 -25.095 -4.924 -0.651 -0.502 C19 GO6 24 GO6 C23 C19 C 0 1 Y N N -93.819 120.184 -24.989 -5.673 0.435 -0.057 C23 GO6 25 GO6 C25 C20 C 0 1 N N N -97.118 119.292 -26.314 -4.708 -2.901 -1.243 C25 GO6 26 GO6 H102 H1 H 0 0 N N N -97.953 124.732 -22.529 1.036 -1.110 -0.555 H102 GO6 27 GO6 H101 H2 H 0 0 N N N -98.326 123.833 -21.019 0.850 0.382 -1.507 H101 GO6 28 GO6 H151 H3 H 0 0 N N N -96.981 121.153 -24.500 -2.973 -1.364 -1.017 H151 GO6 29 GO6 H171 H4 H 0 0 N N N -93.398 122.845 -22.933 -3.182 2.684 0.309 H171 GO6 30 GO6 H211 H5 H 0 0 N N N -92.092 121.115 -24.129 -5.619 2.474 0.591 H211 GO6 31 GO6 H221 H6 H 0 0 N N N -98.579 129.322 -20.749 5.162 2.150 -1.921 H221 GO6 32 GO6 H262 H7 H 0 0 N N N -102.915 125.644 -17.777 4.493 -2.321 1.941 H262 GO6 33 GO6 H261 H8 H 0 0 N N N -101.605 124.715 -18.581 4.531 -3.272 0.437 H261 GO6 34 GO6 H263 H9 H 0 0 N N N -101.196 125.999 -17.394 5.886 -3.372 1.587 H263 GO6 35 GO6 H011 H10 H 0 0 N N N -93.775 126.737 -23.133 -0.502 -2.347 2.536 H011 GO6 36 GO6 H021 H11 H 0 0 N N N -94.885 123.347 -18.521 0.700 3.800 1.651 H021 GO6 37 GO6 H051 H12 H 0 0 N N N -92.175 119.301 -25.518 -7.298 0.023 0.964 H051 GO6 38 GO6 H061 H13 H 0 0 N N N -101.727 128.838 -19.155 7.271 1.025 -0.112 H061 GO6 39 GO6 H071 H14 H 0 0 N N N -94.588 123.716 -21.650 -1.139 1.013 1.579 H071 GO6 40 GO6 H081 H15 H 0 0 N N N -96.093 125.825 -20.911 1.274 0.296 1.513 H081 GO6 41 GO6 H092 H16 H 0 0 N N N -96.781 123.620 -23.729 -1.106 0.152 -1.348 H092 GO6 42 GO6 H091 H17 H 0 0 N N N -96.852 122.542 -22.294 -1.194 1.841 -0.793 H091 GO6 43 GO6 H111 H18 H 0 0 N N N -95.892 125.877 -23.361 -0.541 -1.667 0.246 H111 GO6 44 GO6 H112 H19 H 0 0 N N N -94.619 124.788 -24.008 -2.056 -1.258 1.086 H112 GO6 45 GO6 H121 H20 H 0 0 N N N -96.683 124.705 -18.907 0.469 2.555 -0.374 H121 GO6 46 GO6 H122 H21 H 0 0 N N N -96.811 123.113 -19.730 2.082 2.350 0.350 H122 GO6 47 GO6 H161 H22 H 0 0 N N N -100.273 124.742 -20.170 3.165 -1.679 0.460 H161 GO6 48 GO6 H181 H23 H 0 0 N N N -97.254 127.407 -21.582 2.716 1.896 -1.821 H181 GO6 49 GO6 H253 H24 H 0 0 N N N -97.370 118.405 -26.914 -5.323 -3.780 -1.438 H253 GO6 50 GO6 H251 H25 H 0 0 N N N -97.784 119.345 -25.440 -4.197 -2.604 -2.158 H251 GO6 51 GO6 H252 H26 H 0 0 N N N -97.245 120.197 -26.927 -3.971 -3.137 -0.475 H252 GO6 52 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GO6 C25 O03 SING N N 1 GO6 O03 C19 SING N N 2 GO6 O05 C23 SING N N 3 GO6 C19 C23 DOUB Y N 4 GO6 C19 C15 SING Y N 5 GO6 C23 C21 SING Y N 6 GO6 C15 C13 DOUB Y N 7 GO6 C21 C17 DOUB Y N 8 GO6 C13 C17 SING Y N 9 GO6 C13 C09 SING N N 10 GO6 C11 O01 SING N N 11 GO6 C11 C07 SING N N 12 GO6 C09 C07 SING N N 13 GO6 C07 C08 SING N N 14 GO6 C10 C08 SING N N 15 GO6 C10 C14 SING N N 16 GO6 C18 C14 DOUB Y N 17 GO6 C18 C22 SING Y N 18 GO6 C08 C12 SING N N 19 GO6 C14 C16 SING Y N 20 GO6 C22 C24 DOUB Y N 21 GO6 C16 C20 DOUB Y N 22 GO6 C24 C20 SING Y N 23 GO6 C24 O06 SING N N 24 GO6 C20 O04 SING N N 25 GO6 C12 O02 SING N N 26 GO6 O04 C26 SING N N 27 GO6 C10 H102 SING N N 28 GO6 C10 H101 SING N N 29 GO6 C15 H151 SING N N 30 GO6 C17 H171 SING N N 31 GO6 C21 H211 SING N N 32 GO6 C22 H221 SING N N 33 GO6 C26 H262 SING N N 34 GO6 C26 H261 SING N N 35 GO6 C26 H263 SING N N 36 GO6 O01 H011 SING N N 37 GO6 O02 H021 SING N N 38 GO6 O05 H051 SING N N 39 GO6 O06 H061 SING N N 40 GO6 C07 H071 SING N N 41 GO6 C08 H081 SING N N 42 GO6 C09 H092 SING N N 43 GO6 C09 H091 SING N N 44 GO6 C11 H111 SING N N 45 GO6 C11 H112 SING N N 46 GO6 C12 H121 SING N N 47 GO6 C12 H122 SING N N 48 GO6 C16 H161 SING N N 49 GO6 C18 H181 SING N N 50 GO6 C25 H253 SING N N 51 GO6 C25 H251 SING N N 52 GO6 C25 H252 SING N N 53 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GO6 InChI InChI 1.03 "InChI=1S/C20H26O6/c1-25-19-9-13(3-5-17(19)23)7-15(11-21)16(12-22)8-14-4-6-18(24)20(10-14)26-2/h3-6,9-10,15-16,21-24H,7-8,11-12H2,1-2H3/t15-,16-/m0/s1" GO6 InChIKey InChI 1.03 PUETUDUXMCLALY-HOTGVXAUSA-N GO6 SMILES_CANONICAL CACTVS 3.385 "COc1cc(C[C@@H](CO)[C@H](CO)Cc2ccc(O)c(OC)c2)ccc1O" GO6 SMILES CACTVS 3.385 "COc1cc(C[CH](CO)[CH](CO)Cc2ccc(O)c(OC)c2)ccc1O" GO6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc(ccc1O)C[C@@H](CO)[C@@H](Cc2ccc(c(c2)OC)O)CO" GO6 SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc(ccc1O)CC(CO)C(Cc2ccc(c(c2)OC)O)CO" # _pdbx_chem_comp_identifier.comp_id GO6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R})-2,3-bis[(3-methoxy-4-oxidanyl-phenyl)methyl]butane-1,4-diol" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id GO6 _pdbx_chem_comp_synonyms.name "(-)-secoisolariciresinol" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GO6 "Create component" 2020-09-04 PDBJ GO6 "Modify synonyms" 2021-03-01 PDBE GO6 "Initial release" 2021-06-09 RCSB ##