data_GOK # _chem_comp.id GOK _chem_comp.name "2-[4-[[(1-methylindol-3-yl)methylamino]methyl]piperidin-1-yl]-~{N}-oxidanyl-pyrimidine-5-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H26 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-10-01 _chem_comp.pdbx_modified_date 2018-10-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 394.470 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GOK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6HSH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GOK N1 N1 N 0 1 N N N 46.535 30.824 85.026 -7.647 -2.039 0.735 N1 GOK 1 GOK O3 O1 O 0 1 N N N 46.728 31.936 86.974 -8.385 -0.078 -0.004 O3 GOK 2 GOK C5 C1 C 0 1 Y N N 43.290 34.386 84.315 -3.563 0.557 -0.401 C5 GOK 3 GOK C8 C2 C 0 1 Y N N 45.290 32.855 85.308 -6.063 -0.317 0.021 C8 GOK 4 GOK C9 C3 C 0 1 Y N N 44.269 33.372 86.094 -5.826 0.969 -0.484 C9 GOK 5 GOK C14 C4 C 0 1 N N N 40.953 35.181 84.557 -1.292 -0.022 -0.256 C14 GOK 6 GOK N15 N2 N 0 1 N N N 42.172 34.945 83.779 -2.277 1.008 -0.613 N15 GOK 7 GOK C16 C5 C 0 1 N N N 42.047 35.343 82.374 -2.029 2.256 0.119 C16 GOK 8 GOK C34 C6 C 0 1 Y N N 40.444 43.166 83.445 6.560 -1.034 0.349 C34 GOK 9 GOK C2 C7 C 0 1 N N N 46.268 31.848 85.836 -7.439 -0.799 0.249 C2 GOK 10 GOK O4 O2 O 0 1 N N N 47.262 29.712 85.459 -8.967 -2.501 0.953 O4 GOK 11 GOK N6 N3 N 0 1 Y N N 44.247 34.005 83.458 -3.745 -0.669 0.073 N6 GOK 12 GOK C7 C8 C 0 1 Y N N 45.225 33.247 83.975 -4.960 -1.135 0.295 C7 GOK 13 GOK N10 N4 N 0 1 Y N N 43.264 34.126 85.628 -4.581 1.362 -0.673 N10 GOK 14 GOK C13 C9 C 0 1 N N N 40.516 36.636 84.474 0.110 0.457 -0.639 C13 GOK 15 GOK C17 C10 C 0 1 N N N 41.608 36.797 82.252 -0.649 2.802 -0.252 C17 GOK 16 GOK C18 C11 C 0 1 N N N 40.330 37.087 83.034 0.418 1.763 0.100 C18 GOK 17 GOK C27 C12 C 0 1 N N N 39.998 38.567 82.991 1.794 2.278 -0.325 C27 GOK 18 GOK N29 N5 N 0 1 N N N 39.884 39.098 81.630 2.829 1.335 0.119 N29 GOK 19 GOK C30 C13 C 0 1 N N N 39.046 40.288 81.507 4.167 1.798 -0.272 C30 GOK 20 GOK C31 C14 C 0 1 Y N N 39.413 41.378 82.476 5.200 0.808 0.200 C31 GOK 21 GOK N32 N6 N 0 1 Y N N 39.474 42.686 84.297 6.787 -0.175 1.401 N32 GOK 22 GOK C33 C15 C 0 1 Y N N 38.861 41.616 83.696 5.968 0.916 1.295 C33 GOK 23 GOK C35 C16 C 0 1 Y N N 40.430 42.374 82.291 5.560 -0.453 -0.452 C35 GOK 24 GOK C36 C17 C 0 1 Y N N 41.319 42.677 81.262 5.122 -1.110 -1.605 C36 GOK 25 GOK C37 C18 C 0 1 Y N N 42.196 43.742 81.399 5.675 -2.309 -1.953 C37 GOK 26 GOK C38 C19 C 0 1 Y N N 42.197 44.512 82.553 6.668 -2.882 -1.170 C38 GOK 27 GOK C39 C20 C 0 1 Y N N 41.320 44.233 83.590 7.103 -2.260 -0.021 C39 GOK 28 GOK C44 C21 C 0 1 N N N 39.160 43.216 85.618 7.760 -0.396 2.473 C44 GOK 29 GOK H1 H1 H 0 1 N N N 46.206 30.852 84.082 -6.892 -2.615 0.933 H1 GOK 30 GOK H2 H2 H 0 1 N N N 44.286 33.152 87.151 -6.650 1.627 -0.716 H2 GOK 31 GOK H3 H3 H 0 1 N N N 40.148 34.542 84.164 -1.333 -0.206 0.818 H3 GOK 32 GOK H4 H4 H 0 1 N N N 41.144 34.924 85.609 -1.520 -0.943 -0.791 H4 GOK 33 GOK H5 H5 H 0 1 N N N 41.301 34.700 81.884 -2.793 2.989 -0.143 H5 GOK 34 GOK H6 H6 H 0 1 N N N 43.021 35.219 81.878 -2.066 2.061 1.191 H6 GOK 35 GOK H7 H7 H 0 1 N N N 47.542 29.846 86.357 -9.015 -3.401 1.304 H7 GOK 36 GOK H8 H8 H 0 1 N N N 46.013 32.920 83.313 -5.101 -2.134 0.682 H8 GOK 37 GOK H9 H9 H 0 1 N N N 41.283 37.266 84.948 0.842 -0.301 -0.359 H9 GOK 38 GOK H10 H10 H 0 1 N N N 39.563 36.753 85.010 0.155 0.627 -1.714 H10 GOK 39 GOK H11 H11 H 0 1 N N N 42.412 37.442 82.637 -0.616 3.010 -1.322 H11 GOK 40 GOK H12 H12 H 0 1 N N N 41.432 37.025 81.190 -0.459 3.721 0.304 H12 GOK 41 GOK H13 H13 H 0 1 N N N 39.501 36.520 82.585 0.411 1.583 1.175 H13 GOK 42 GOK H14 H14 H 0 1 N N N 40.793 39.118 83.515 1.828 2.369 -1.411 H14 GOK 43 GOK H15 H15 H 0 1 N N N 39.040 38.725 83.508 1.973 3.253 0.127 H15 GOK 44 GOK H16 H16 H 0 1 N N N 39.497 38.383 81.048 2.649 0.407 -0.235 H16 GOK 45 GOK H18 H18 H 0 1 N N N 39.147 40.681 80.485 4.218 1.887 -1.357 H18 GOK 46 GOK H19 H19 H 0 1 N N N 38.000 39.998 81.687 4.362 2.770 0.181 H19 GOK 47 GOK H20 H20 H 0 1 N N N 38.054 41.044 84.130 5.941 1.741 1.993 H20 GOK 48 GOK H21 H21 H 0 1 N N N 41.325 42.084 80.360 4.349 -0.670 -2.218 H21 GOK 49 GOK H22 H22 H 0 1 N N N 42.885 43.974 80.600 5.336 -2.817 -2.844 H22 GOK 50 GOK H23 H23 H 0 1 N N N 42.888 45.337 82.645 7.095 -3.831 -1.459 H23 GOK 51 GOK H24 H24 H 0 1 N N N 41.318 44.831 84.489 7.874 -2.715 0.583 H24 GOK 52 GOK H25 H25 H 0 1 N N N 38.341 42.631 86.063 8.720 0.034 2.187 H25 GOK 53 GOK H26 H26 H 0 1 N N N 40.050 43.149 86.261 7.407 0.079 3.388 H26 GOK 54 GOK H27 H27 H 0 1 N N N 38.852 44.268 85.527 7.878 -1.467 2.642 H27 GOK 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GOK C36 C37 DOUB Y N 1 GOK C36 C35 SING Y N 2 GOK C37 C38 SING Y N 3 GOK C30 N29 SING N N 4 GOK C30 C31 SING N N 5 GOK N29 C27 SING N N 6 GOK C17 C16 SING N N 7 GOK C17 C18 SING N N 8 GOK C35 C31 SING Y N 9 GOK C35 C34 DOUB Y N 10 GOK C16 N15 SING N N 11 GOK C31 C33 DOUB Y N 12 GOK C38 C39 DOUB Y N 13 GOK C27 C18 SING N N 14 GOK C18 C13 SING N N 15 GOK C34 C39 SING Y N 16 GOK C34 N32 SING Y N 17 GOK N6 C7 DOUB Y N 18 GOK N6 C5 SING Y N 19 GOK C33 N32 SING Y N 20 GOK N15 C5 SING N N 21 GOK N15 C14 SING N N 22 GOK C7 C8 SING Y N 23 GOK N32 C44 SING N N 24 GOK C5 N10 DOUB Y N 25 GOK C13 C14 SING N N 26 GOK N1 O4 SING N N 27 GOK N1 C2 SING N N 28 GOK C8 C2 SING N N 29 GOK C8 C9 DOUB Y N 30 GOK N10 C9 SING Y N 31 GOK C2 O3 DOUB N N 32 GOK N1 H1 SING N N 33 GOK C9 H2 SING N N 34 GOK C14 H3 SING N N 35 GOK C14 H4 SING N N 36 GOK C16 H5 SING N N 37 GOK C16 H6 SING N N 38 GOK O4 H7 SING N N 39 GOK C7 H8 SING N N 40 GOK C13 H9 SING N N 41 GOK C13 H10 SING N N 42 GOK C17 H11 SING N N 43 GOK C17 H12 SING N N 44 GOK C18 H13 SING N N 45 GOK C27 H14 SING N N 46 GOK C27 H15 SING N N 47 GOK N29 H16 SING N N 48 GOK C30 H18 SING N N 49 GOK C30 H19 SING N N 50 GOK C33 H20 SING N N 51 GOK C36 H21 SING N N 52 GOK C37 H22 SING N N 53 GOK C38 H23 SING N N 54 GOK C39 H24 SING N N 55 GOK C44 H25 SING N N 56 GOK C44 H26 SING N N 57 GOK C44 H27 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GOK InChI InChI 1.03 "InChI=1S/C21H26N6O2/c1-26-14-17(18-4-2-3-5-19(18)26)11-22-10-15-6-8-27(9-7-15)21-23-12-16(13-24-21)20(28)25-29/h2-5,12-15,22,29H,6-11H2,1H3,(H,25,28)" GOK InChIKey InChI 1.03 PAWIYAYFNXQGAP-UHFFFAOYSA-N GOK SMILES_CANONICAL CACTVS 3.385 "Cn1cc(CNCC2CCN(CC2)c3ncc(cn3)C(=O)NO)c4ccccc14" GOK SMILES CACTVS 3.385 "Cn1cc(CNCC2CCN(CC2)c3ncc(cn3)C(=O)NO)c4ccccc14" GOK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cn1cc(c2c1cccc2)CNCC3CCN(CC3)c4ncc(cn4)C(=O)NO" GOK SMILES "OpenEye OEToolkits" 2.0.6 "Cn1cc(c2c1cccc2)CNCC3CCN(CC3)c4ncc(cn4)C(=O)NO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GOK "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[4-[[(1-methylindol-3-yl)methylamino]methyl]piperidin-1-yl]-~{N}-oxidanyl-pyrimidine-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GOK "Create component" 2018-10-01 EBI GOK "Initial release" 2018-10-31 RCSB #