data_GQ1 # _chem_comp.id GQ1 _chem_comp.name 4-O-sulfo-alpha-D-glucopyranose _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O9 S" _chem_comp.mon_nstd_parent_comp_id GLC _chem_comp.pdbx_synonyms "4-O-sulfo-alpha-D-glucose; 4-O-sulfo-D-glucose; 4-O-sulfo-glucose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-02-21 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 260.219 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GQ1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4C9F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 GQ1 4-O-sulfo-alpha-D-glucose PDB ? 2 GQ1 4-O-sulfo-D-glucose PDB ? 3 GQ1 4-O-sulfo-glucose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GQ1 SA SA S 0 1 N N N 33.430 -20.608 42.391 2.473 -0.236 0.080 SA GQ1 1 GQ1 C1 C1 C 0 1 N N S 33.004 -25.415 40.362 -2.845 -0.113 -0.288 C1 GQ1 2 GQ1 O1S O1S O 0 1 N N N 34.335 -19.451 42.563 3.475 -0.190 1.086 O1S GQ1 3 GQ1 C2 C2 C 0 1 N N R 31.879 -24.828 41.117 -1.962 -1.336 -0.548 C2 GQ1 4 GQ1 O2S O2S O 0 1 N N N 32.505 -20.782 43.545 2.871 0.792 -0.970 O2S GQ1 5 GQ1 C3 C3 C 0 1 N N R 32.219 -23.509 41.745 -0.678 -1.214 0.277 C3 GQ1 6 GQ1 O3S O3S O 0 1 N N N 32.605 -20.169 41.273 2.135 -1.421 -0.627 O3S GQ1 7 GQ1 C4 C4 C 0 1 N N S 33.636 -23.307 42.330 0.026 0.098 -0.086 C4 GQ1 8 GQ1 C5 C5 C 0 1 N N R 34.659 -24.452 42.036 -0.934 1.266 0.156 C5 GQ1 9 GQ1 C6 C6 C 0 1 N N N 35.067 -25.185 43.335 -0.260 2.575 -0.261 C6 GQ1 10 GQ1 O1 O1 O 0 1 N Y N 33.084 -24.483 39.296 -3.217 -0.078 1.091 O1 GQ1 11 GQ1 O2 O2 O 0 1 N N N 30.964 -24.471 40.122 -2.664 -2.521 -0.166 O2 GQ1 12 GQ1 O3 O3 O 0 1 N N N 31.303 -23.471 42.828 0.185 -2.315 -0.015 O3 GQ1 13 GQ1 O4 O4 O 0 1 N N N 34.145 -21.969 41.994 1.188 0.258 0.730 O4 GQ1 14 GQ1 O5 O5 O 0 1 N N N 34.245 -25.492 41.101 -2.121 1.074 -0.617 O5 GQ1 15 GQ1 O6 O6 O 0 1 N N N 36.378 -24.832 43.773 -1.109 3.675 0.073 O6 GQ1 16 GQ1 H1 H1A H 0 1 N N N 32.722 -26.410 39.987 -3.742 -0.174 -0.905 H1 GQ1 17 GQ1 H2 H2A H 0 1 N N N 31.466 -25.533 41.854 -1.712 -1.386 -1.607 H2 GQ1 18 GQ1 H3 H3A H 0 1 N N N 32.010 -22.698 41.032 -0.924 -1.214 1.339 H3 GQ1 19 GQ1 H4 H4A H 0 1 N N N 33.502 -23.316 43.422 0.316 0.077 -1.136 H4 GQ1 20 GQ1 H5 H5A H 0 1 N N N 35.566 -23.975 41.637 -1.192 1.311 1.214 H5 GQ1 21 GQ1 H61 H6A H 0 1 N N N 34.349 -24.926 44.127 0.690 2.677 0.264 H61 GQ1 22 GQ1 H62 H6AA H 0 1 N N N 35.036 -26.269 43.153 -0.082 2.566 -1.336 H62 GQ1 23 GQ1 HO2 H2HA H 0 1 N Y N 30.197 -24.079 40.523 -3.492 -2.660 -0.646 HO2 GQ1 24 GQ1 HO3 H3HA H 0 1 N Y N 31.421 -22.664 43.315 -0.200 -3.180 0.184 HO3 GQ1 25 GQ1 HO6 HOWB H 0 1 N Y N 36.584 -25.305 44.571 -0.744 4.539 -0.163 HO6 GQ1 26 GQ1 HO1 HO1 H 0 1 N Y N 33.785 -24.735 38.707 -3.778 0.673 1.328 HO1 GQ1 27 GQ1 HS2 HS2 H 0 1 N N N 31.619 -20.568 43.276 3.682 0.573 -1.447 HS2 GQ1 28 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GQ1 SA O1S DOUB N N 1 GQ1 SA O2S SING N N 2 GQ1 SA O3S DOUB N N 3 GQ1 SA O4 SING N N 4 GQ1 C1 C2 SING N N 5 GQ1 C1 O1 SING N N 6 GQ1 C1 O5 SING N N 7 GQ1 C2 C3 SING N N 8 GQ1 C2 O2 SING N N 9 GQ1 C3 C4 SING N N 10 GQ1 C3 O3 SING N N 11 GQ1 C4 C5 SING N N 12 GQ1 C4 O4 SING N N 13 GQ1 C5 C6 SING N N 14 GQ1 C5 O5 SING N N 15 GQ1 C6 O6 SING N N 16 GQ1 C1 H1 SING N N 17 GQ1 C2 H2 SING N N 18 GQ1 C3 H3 SING N N 19 GQ1 C4 H4 SING N N 20 GQ1 C5 H5 SING N N 21 GQ1 C6 H61 SING N N 22 GQ1 C6 H62 SING N N 23 GQ1 O2 HO2 SING N N 24 GQ1 O3 HO3 SING N N 25 GQ1 O6 HO6 SING N N 26 GQ1 O1 HO1 SING N N 27 GQ1 O2S HS2 SING N N 28 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GQ1 SMILES ACDLabs 12.01 "O=S(=O)(O)OC1C(OC(O)C(O)C1O)CO" GQ1 InChI InChI 1.03 "InChI=1S/C6H12O9S/c7-1-2-5(15-16(11,12)13)3(8)4(9)6(10)14-2/h2-10H,1H2,(H,11,12,13)/t2-,3-,4-,5-,6+/m1/s1" GQ1 InChIKey InChI 1.03 LOTQRUGOUKUSEY-UKFBFLRUSA-N GQ1 SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O[S](O)(=O)=O" GQ1 SMILES CACTVS 3.385 "OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O[S](O)(=O)=O" GQ1 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)OS(=O)(=O)O)O" GQ1 SMILES "OpenEye OEToolkits" 1.7.6 "C(C1C(C(C(C(O1)O)O)O)OS(=O)(=O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GQ1 "SYSTEMATIC NAME" ACDLabs 12.01 4-O-sulfo-alpha-D-glucopyranose GQ1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,4R,5R,6S)-2-(hydroxymethyl)-4,5,6-tris(oxidanyl)oxan-3-yl] hydrogen sulfate" GQ1 "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 DGlcp[4S]a GQ1 "COMMON NAME" GMML 1.0 4-sulfo-a-D-glucopyranose GQ1 "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 a-D-Glcp4SO3 # _pdbx_chem_comp_related.comp_id GQ1 _pdbx_chem_comp_related.related_comp_id GLC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 GQ1 C1 GLC C1 "Carbohydrate core" 2 GQ1 C2 GLC C2 "Carbohydrate core" 3 GQ1 C3 GLC C3 "Carbohydrate core" 4 GQ1 C4 GLC C4 "Carbohydrate core" 5 GQ1 C5 GLC C5 "Carbohydrate core" 6 GQ1 C6 GLC C6 "Carbohydrate core" 7 GQ1 O1 GLC O1 "Carbohydrate core" 8 GQ1 O2 GLC O2 "Carbohydrate core" 9 GQ1 O3 GLC O3 "Carbohydrate core" 10 GQ1 O4 GLC O4 "Carbohydrate core" 11 GQ1 O5 GLC O5 "Carbohydrate core" 12 GQ1 O6 GLC O6 "Carbohydrate core" 13 GQ1 H1 GLC H1 "Carbohydrate core" 14 GQ1 H2 GLC H2 "Carbohydrate core" 15 GQ1 HO2 GLC HO2 "Carbohydrate core" 16 GQ1 H3 GLC H3 "Carbohydrate core" 17 GQ1 HO3 GLC HO3 "Carbohydrate core" 18 GQ1 H4 GLC H4 "Carbohydrate core" 19 GQ1 H5 GLC H5 "Carbohydrate core" 20 GQ1 H61 GLC H61 "Carbohydrate core" 21 GQ1 H62 GLC H62 "Carbohydrate core" 22 GQ1 HO1 GLC HO1 "Carbohydrate core" 23 GQ1 HO6 GLC HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support GQ1 "CARBOHYDRATE ISOMER" D PDB ? GQ1 "CARBOHYDRATE RING" pyranose PDB ? GQ1 "CARBOHYDRATE ANOMER" alpha PDB ? GQ1 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GQ1 "Create component" 2014-02-21 EBI GQ1 "Initial release" 2014-10-15 RCSB GQ1 "Other modification" 2020-07-03 RCSB GQ1 "Modify parent residue" 2020-07-17 RCSB GQ1 "Modify synonyms" 2020-07-17 RCSB GQ1 "Modify linking type" 2020-07-17 RCSB GQ1 "Modify atom id" 2020-07-17 RCSB GQ1 "Modify component atom id" 2020-07-17 RCSB GQ1 "Modify leaving atom flag" 2020-07-17 RCSB ##