data_GRG # _chem_comp.id GRG _chem_comp.name "GERANYLGERANYL DIPHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H36 O7 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2002-11-20 _chem_comp.pdbx_modified_date 2012-01-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 450.443 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GRG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1N4P _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GRG C20 C20 C 0 1 N N N 35.085 84.010 66.079 10.224 -0.522 -1.775 C20 GRG 1 GRG C19 C19 C 0 1 N N N 35.947 85.195 68.135 12.429 -0.542 -0.378 C19 GRG 2 GRG C18 C18 C 0 1 N N N 35.897 85.146 66.627 10.939 -0.331 -0.463 C18 GRG 3 GRG C17 C17 C 0 1 N N N 36.511 86.017 65.826 10.265 0.018 0.605 C17 GRG 4 GRG C16 C16 C 0 1 N N N 37.360 87.167 66.282 8.776 0.229 0.521 C16 GRG 5 GRG C14 C14 C 0 1 N N N 36.210 88.474 63.251 5.944 0.701 2.220 C14 GRG 6 GRG C13 C13 C 0 1 N N N 36.773 88.894 64.593 6.587 -0.440 1.475 C13 GRG 7 GRG C15 C15 C 0 1 N N N 37.855 87.973 65.120 8.076 -0.651 1.559 C15 GRG 8 GRG C12 C12 C 0 1 N N N 36.357 89.992 65.278 5.851 -1.249 0.754 C12 GRG 9 GRG C11 C11 C 0 1 N N N 35.294 90.946 64.813 4.382 -0.967 0.569 C11 GRG 10 GRG C9 C9 C 0 1 N N N 35.080 92.076 65.806 4.055 -0.924 -0.925 C9 GRG 11 GRG C8 C8 C 0 1 N N N 34.049 93.078 65.382 2.586 -0.642 -1.110 C8 GRG 12 GRG C10 C10 C 0 1 N N N 32.735 92.942 66.112 1.592 -1.774 -1.073 C10 GRG 13 GRG C7 C7 C 0 1 N N N 34.309 94.021 64.435 2.173 0.586 -1.303 C7 GRG 14 GRG C6 C6 C 0 1 N N N 33.331 95.071 63.972 0.697 0.884 -1.364 C6 GRG 15 GRG C5 C5 C 0 1 N N N 33.017 94.997 62.476 0.354 1.973 -0.346 C5 GRG 16 GRG C3 C3 C 0 1 N N N 31.845 95.855 62.099 -1.122 2.271 -0.408 C3 GRG 17 GRG C4 C4 C 0 1 N N N 32.238 97.198 61.534 -1.650 3.254 -1.420 C4 GRG 18 GRG C2 C2 C 0 1 N N N 30.562 95.439 62.265 -1.945 1.676 0.419 C2 GRG 19 GRG C1 C1 C 0 1 N N N 29.332 96.228 61.920 -3.421 1.974 0.358 C1 GRG 20 GRG O1 O1 O 0 1 N N N 28.181 95.454 62.249 -4.158 0.752 0.429 O1 GRG 21 GRG PA PA P 0 1 N N S 26.868 96.247 62.673 -5.766 0.693 0.390 PA GRG 22 GRG O1A O1A O 0 1 N N N 26.374 97.217 61.642 -6.361 1.415 1.700 O1A GRG 23 GRG O3A O3A O 0 1 N N N 27.231 96.962 64.027 -6.247 -0.843 0.358 O3A GRG 24 GRG O2A O2A O 0 1 N N N 25.822 95.160 62.982 -6.256 1.389 -0.822 O2A GRG 25 GRG PB PB P 0 1 N N N 26.424 97.910 64.961 -7.610 -1.579 -0.080 PB GRG 26 GRG O1B O1B O 0 1 N N N 25.033 98.176 64.476 -7.337 -3.157 -0.247 O1B GRG 27 GRG O2B O2B O 0 1 N N N 27.321 99.162 65.016 -8.733 -1.346 1.050 O2B GRG 28 GRG O3B O3B O 0 1 N N N 26.456 97.211 66.338 -8.080 -1.021 -1.367 O3B GRG 29 GRG H201 1H20 H 0 0 N N N 35.048 83.973 64.965 10.943 -0.810 -2.542 H201 GRG 30 GRG H202 2H20 H 0 0 N N N 35.444 83.038 66.490 9.474 -1.306 -1.670 H202 GRG 31 GRG H203 3H20 H 0 0 N N N 34.054 84.025 66.504 9.738 0.410 -2.064 H203 GRG 32 GRG H191 1H19 H 0 0 N N N 36.550 86.039 68.542 12.941 0.398 -0.585 H191 GRG 33 GRG H192 2H19 H 0 0 N N N 34.916 85.210 68.560 12.691 -0.886 0.622 H192 GRG 34 GRG H193 3H19 H 0 0 N N N 36.306 84.223 68.546 12.732 -1.290 -1.110 H193 GRG 35 GRG H17 H17 H 0 1 N N N 36.313 85.781 64.766 10.778 0.155 1.546 H17 GRG 36 GRG H161 1H16 H 0 0 N N N 36.822 87.804 67.022 8.545 1.276 0.717 H161 GRG 37 GRG H162 2H16 H 0 0 N N N 38.200 86.823 66.929 8.427 -0.039 -0.476 H162 GRG 38 GRG H141 1H14 H 0 0 N N N 35.413 89.151 62.863 6.693 1.205 2.831 H141 GRG 39 GRG H142 2H14 H 0 0 N N N 37.027 88.359 62.501 5.521 1.408 1.507 H142 GRG 40 GRG H143 3H14 H 0 0 N N N 35.843 87.421 63.291 5.152 0.315 2.862 H143 GRG 41 GRG H151 1H15 H 0 0 N N N 38.783 88.535 65.376 8.307 -1.698 1.363 H151 GRG 42 GRG H152 2H15 H 0 0 N N N 38.267 87.321 64.314 8.425 -0.382 2.557 H152 GRG 43 GRG H12 H12 H 0 1 N N N 36.894 90.111 66.233 6.297 -2.117 0.292 H12 GRG 44 GRG H111 1H11 H 0 0 N N N 35.517 91.337 63.793 3.798 -1.755 1.046 H111 GRG 45 GRG H112 2H11 H 0 0 N N N 34.339 90.414 64.590 4.136 -0.008 1.023 H112 GRG 46 GRG HC91 1HC9 H 0 0 N N N 34.836 91.668 66.814 4.638 -0.136 -1.402 HC91 GRG 47 GRG HC92 2HC9 H 0 0 N N N 36.046 92.583 66.034 4.301 -1.884 -1.379 HC92 GRG 48 GRG H101 1H10 H 0 0 N N N 31.968 93.687 65.796 2.123 -2.723 -0.994 H101 GRG 49 GRG H102 2H10 H 0 0 N N N 32.337 91.904 66.017 0.935 -1.653 -0.211 H102 GRG 50 GRG H103 3H10 H 0 0 N N N 32.891 92.981 67.215 0.997 -1.766 -1.987 H103 GRG 51 GRG HC7 HC7 H 0 1 N N N 35.333 93.932 64.034 2.891 1.385 -1.417 HC7 GRG 52 GRG HC61 1HC6 H 0 0 N N N 32.393 95.029 64.574 0.438 1.228 -2.365 HC61 GRG 53 GRG HC62 2HC6 H 0 0 N N N 33.685 96.090 64.250 0.134 -0.020 -1.133 HC62 GRG 54 GRG HC51 1HC5 H 0 0 N N N 33.913 95.247 61.862 0.614 1.629 0.655 HC51 GRG 55 GRG HC52 2HC5 H 0 0 N N N 32.866 93.942 62.147 0.918 2.877 -0.577 HC52 GRG 56 GRG HC41 1HC4 H 0 0 N N N 31.367 97.835 61.253 -1.904 2.727 -2.340 HC41 GRG 57 GRG HC42 2HC4 H 0 0 N N N 32.913 97.739 62.237 -2.541 3.741 -1.023 HC42 GRG 58 GRG HC43 3HC4 H 0 0 N N N 32.930 97.074 60.669 -0.888 4.005 -1.630 HC43 GRG 59 GRG HC2 HC2 H 0 1 N N N 30.517 94.424 62.695 -1.567 0.972 1.145 HC2 GRG 60 GRG HC11 1HC1 H 0 0 N N N 29.321 97.232 62.403 -3.698 2.615 1.195 HC11 GRG 61 GRG HC12 2HC1 H 0 0 N N N 29.327 96.566 60.857 -3.650 2.483 -0.579 HC12 GRG 62 GRG H1AO OH1A H 0 0 N N N 25.590 97.690 61.895 -6.081 1.011 2.533 H1AO GRG 63 GRG H1BO OH1B H 0 0 N N N 24.540 98.754 65.046 -8.116 -3.665 -0.510 H1BO GRG 64 GRG H2BO OH2B H 0 0 N N N 26.828 99.740 65.586 -8.491 -1.687 1.921 H2BO GRG 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GRG C20 C18 SING N N 1 GRG C20 H201 SING N N 2 GRG C20 H202 SING N N 3 GRG C20 H203 SING N N 4 GRG C19 C18 SING N N 5 GRG C19 H191 SING N N 6 GRG C19 H192 SING N N 7 GRG C19 H193 SING N N 8 GRG C18 C17 DOUB N N 9 GRG C17 C16 SING N N 10 GRG C17 H17 SING N N 11 GRG C16 C15 SING N N 12 GRG C16 H161 SING N N 13 GRG C16 H162 SING N N 14 GRG C14 C13 SING N N 15 GRG C14 H141 SING N N 16 GRG C14 H142 SING N N 17 GRG C14 H143 SING N N 18 GRG C13 C15 SING N N 19 GRG C13 C12 DOUB N E 20 GRG C15 H151 SING N N 21 GRG C15 H152 SING N N 22 GRG C12 C11 SING N N 23 GRG C12 H12 SING N N 24 GRG C11 C9 SING N N 25 GRG C11 H111 SING N N 26 GRG C11 H112 SING N N 27 GRG C9 C8 SING N N 28 GRG C9 HC91 SING N N 29 GRG C9 HC92 SING N N 30 GRG C8 C10 SING N N 31 GRG C8 C7 DOUB N E 32 GRG C10 H101 SING N N 33 GRG C10 H102 SING N N 34 GRG C10 H103 SING N N 35 GRG C7 C6 SING N N 36 GRG C7 HC7 SING N N 37 GRG C6 C5 SING N N 38 GRG C6 HC61 SING N N 39 GRG C6 HC62 SING N N 40 GRG C5 C3 SING N N 41 GRG C5 HC51 SING N N 42 GRG C5 HC52 SING N N 43 GRG C3 C4 SING N N 44 GRG C3 C2 DOUB N E 45 GRG C4 HC41 SING N N 46 GRG C4 HC42 SING N N 47 GRG C4 HC43 SING N N 48 GRG C2 C1 SING N N 49 GRG C2 HC2 SING N N 50 GRG C1 O1 SING N N 51 GRG C1 HC11 SING N N 52 GRG C1 HC12 SING N N 53 GRG O1 PA SING N N 54 GRG PA O1A SING N N 55 GRG PA O3A SING N N 56 GRG PA O2A DOUB N N 57 GRG O1A H1AO SING N N 58 GRG O3A PB SING N N 59 GRG PB O1B SING N N 60 GRG PB O2B SING N N 61 GRG PB O3B DOUB N N 62 GRG O1B H1BO SING N N 63 GRG O2B H2BO SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GRG SMILES ACDLabs 10.04 "O=P(O)(O)OP(=O)(O)OC/C=C(/CC\C=C(/C)CC\C=C(/C)CC\C=C(/C)C)C" GRG InChI InChI 1.03 "InChI=1S/C20H36O7P2/c1-17(2)9-6-10-18(3)11-7-12-19(4)13-8-14-20(5)15-16-26-29(24,25)27-28(21,22)23/h9,11,13,15H,6-8,10,12,14,16H2,1-5H3,(H,24,25)(H2,21,22,23)/b18-11+,19-13+,20-15+" GRG InChIKey InChI 1.03 OINNEUNVOZHBOX-QIRCYJPOSA-N GRG SMILES_CANONICAL CACTVS 3.385 "CC(C)=CCCC(/C)=C/CC\C(C)=C\CC\C(C)=C\CO[P](O)(=O)O[P](O)(O)=O" GRG SMILES CACTVS 3.385 "CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCO[P](O)(=O)O[P](O)(O)=O" GRG SMILES_CANONICAL "OpenEye OEToolkits" 1.7.5 "CC(=CCC/C(=C/CC/C(=C/CC/C(=C/CO[P@](=O)(O)OP(=O)(O)O)/C)/C)/C)C" GRG SMILES "OpenEye OEToolkits" 1.7.5 "CC(=CCCC(=CCCC(=CCCC(=CCOP(=O)(O)OP(=O)(O)O)C)C)C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GRG "SYSTEMATIC NAME" ACDLabs 10.04 "(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl trihydrogen diphosphate" GRG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "phosphono [(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenyl] hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GRG "Create component" 2002-11-20 RCSB GRG "Modify descriptor" 2011-06-04 RCSB GRG "Modify descriptor" 2012-01-05 RCSB GRG "Modify coordinates" 2012-01-05 RCSB #